RNA–Protein interactions for RNA: ENST00000545279.5

SMAD5-211, Transcript of SMAD family member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD5, Length 7,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-211ENST00000545279 RYR3Q15413 4870 aa3.07□□□□□ -1.92
SMAD5-211ENST00000545279 KMT2AQ03164 3969 aa3.04□□□□□ -1.92
SMAD5-211ENST00000545279 LRP1BQ9NZR2 4599 aa3.04□□□□□ -1.92
SMAD5-211ENST00000545279 C10orf95Q9H7T3 257 aa3.03□□□□□ -1.92
SMAD5-211ENST00000545279 CYSTM1Q9H1C7 97 aa3.01□□□□□ -1.93
SMAD5-211ENST00000545279 HUWE1Q7Z6Z7 4374 aaKnown RBP3.01□□□□□ -1.93
SMAD5-211ENST00000545279 PLECQ15149 4684 aaKnown RBP3□□□□□ -1.93
SMAD5-211ENST00000545279 PRAC1Q96KF2 57 aa3□□□□□ -1.93
SMAD5-211ENST00000545279 VPS13BQ7Z7G8 4022 aa3□□□□□ -1.93
SMAD5-211ENST00000545279 TGP01266 2768 aa2.99□□□□□ -1.93
SMAD5-211ENST00000545279 ALMS1Q8TCU4 4167 aa2.99□□□□□ -1.93
SMAD5-211ENST00000545279 KRTAP13-4Q3LI77 160 aa2.98□□□□□ -1.93
SMAD5-211ENST00000545279 MYCBP2O75592 4640 aa2.98□□□□□ -1.93
SMAD5-211ENST00000545279 KIAA1109Q2LD37 5005 aa2.97□□□□□ -1.93
SMAD5-211ENST00000545279 HYDINQ4G0P3 5121 aa2.97□□□□□ -1.93
SMAD5-211ENST00000545279 DYNC2H1Q8NCM8 4307 aaKnown RBP2.97□□□□□ -1.93
SMAD5-211ENST00000545279 PKD1P98161 4303 aa2.97□□□□□ -1.93
SMAD5-211ENST00000545279 DNAH10Q8IVF4 4471 aa2.96□□□□□ -1.94
SMAD5-211ENST00000545279 EPPK1P58107 5090 aaKnown RBP2.96□□□□□ -1.94
SMAD5-211ENST00000545279 SRRM2Q9UQ35 2752 aaKnown RBP2.96□□□□□ -1.94
SMAD5-211ENST00000545279 DNAH2Q9P225 4427 aa2.95□□□□□ -1.94
SMAD5-211ENST00000545279 KRTAP8-1Q8IUC2 63 aa2.95□□□□□ -1.94
SMAD5-211ENST00000545279 KRTAP10-6P60371 365 aaPredicted RBP2.93□□□□□ -1.94
SMAD5-211ENST00000545279 KRTAP10-12P60413 245 aa2.93□□□□□ -1.94
SMAD5-211ENST00000545279 MEGF8Q7Z7M0 2845 aa2.92□□□□□ -1.94
SMAD5-211ENST00000545279 MT1HP80294 61 aa2.92□□□□□ -1.94
SMAD5-211ENST00000545279 DNAH5Q8TE73 4624 aa2.92□□□□□ -1.94
SMAD5-211ENST00000545279 LORP23490 312 aaPredicted RBP2.91□□□□□ -1.94
SMAD5-211ENST00000545279 ABCA13Q86UQ4 5058 aa2.91□□□□□ -1.94
SMAD5-211ENST00000545279 VPS13DQ5THJ4 4388 aa2.91□□□□□ -1.94
SMAD5-211ENST00000545279 KRTAP3-1Q9BYR8 98 aa2.9□□□□□ -1.95
SMAD5-211ENST00000545279 PKHD1P08F94 4074 aa2.9□□□□□ -1.95
SMAD5-211ENST00000545279 KRTAP15-1Q3LI76 137 aa2.89□□□□□ -1.95
SMAD5-211ENST00000545279 DYNC1H1Q14204 4646 aaKnown RBP2.89□□□□□ -1.95
SMAD5-211ENST00000545279 DNAH8Q96JB1 4490 aa2.87□□□□□ -1.95
SMAD5-211ENST00000545279 MT2AP02795 61 aa2.84□□□□□ -1.95
SMAD5-211ENST00000545279 KRTAP12-1P59990 96 aa2.84□□□□□ -1.96
SMAD5-211ENST00000545279 DNAH17Q9UFH2 4485 aa2.83□□□□□ -1.96
SMAD5-211ENST00000545279 KRTAP12-2P59991 146 aa2.83□□□□□ -1.96
SMAD5-211ENST00000545279 SACSQ9NZJ4 4579 aa2.82□□□□□ -1.96
SMAD5-211ENST00000545279 STARD9Q9P2P6 4700 aa2.82□□□□□ -1.96
SMAD5-211ENST00000545279 KRTAP17-1Q9BYP8 105 aa2.81□□□□□ -1.96
SMAD5-211ENST00000545279 FAT3Q8TDW7 4589 aa2.81□□□□□ -1.96
SMAD5-211ENST00000545279 CRCT1Q9UGL9 99 aa2.78□□□□□ -1.97
SMAD5-211ENST00000545279 SPRR2FQ96RM1 72 aa2.77□□□□□ -1.97
SMAD5-211ENST00000545279 KRTAP23-1A1A580 65 aa2.77□□□□□ -1.97
SMAD5-211ENST00000545279 KRTAP19-4Q3LI73 84 aa2.76□□□□□ -1.97
SMAD5-211ENST00000545279 KRTAP12-3P60328 96 aa2.76□□□□□ -1.97
SMAD5-211ENST00000545279 KRTAP4-1Q9BYQ7 146 aa2.75□□□□□ -1.97
SMAD5-211ENST00000545279 HSPG2P98160 4391 aa2.72□□□□□ -1.97
SMAD5-211ENST00000545279 RNF213Q63HN8 5207 aa2.72□□□□□ -1.97
SMAD5-211ENST00000545279 LRP2P98164 4655 aa2.72□□□□□ -1.97
SMAD5-211ENST00000545279 MT1FP04733 61 aa2.72□□□□□ -1.97
SMAD5-211ENST00000545279 KRTAP10-7P60409 375 aaPredicted RBP2.71□□□□□ -1.98
SMAD5-211ENST00000545279 SPRR2GQ9BYE4 73 aa2.71□□□□□ -1.98
SMAD5-211ENST00000545279 KRTAP3-3Q9BYR6 98 aa2.71□□□□□ -1.98
SMAD5-211ENST00000545279 KRTAP9-6A0A140TA67 174 aa2.71□□□□□ -1.98
SMAD5-211ENST00000545279 PKHD1L1Q86WI1 4243 aa2.71□□□□□ -1.98
SMAD5-211ENST00000545279 TNXBP22105 4242 aa2.7□□□□□ -1.98
SMAD5-211ENST00000545279 UBR4Q5T4S7 5183 aa2.69□□□□□ -1.98
SMAD5-211ENST00000545279 KRTAP3-2Q9BYR7 98 aa2.69□□□□□ -1.98
SMAD5-211ENST00000545279 H3BS24 57 aa2.69□□□□□ -1.98
SMAD5-211ENST00000545279 SPRR2EP22531 72 aa2.69□□□□□ -1.98
SMAD5-211ENST00000545279 SPRR2BP35325 72 aa2.69□□□□□ -1.98
SMAD5-211ENST00000545279 SPRR2AP35326 72 aa2.69□□□□□ -1.98
SMAD5-211ENST00000545279 LCE2DQ5TA82 110 aaPredicted RBP2.67□□□□□ -1.98
SMAD5-211ENST00000545279 NDUFAF8A1L188 74 aa2.66□□□□□ -1.98
SMAD5-211ENST00000545279 KRTAP9-2Q9BYQ4 174 aa2.66□□□□□ -1.98
SMAD5-211ENST00000545279 SPRR2DP22532 72 aa2.64□□□□□ -1.99
SMAD5-211ENST00000545279 LPAP08519 4548 aa2.63□□□□□ -1.99
SMAD5-211ENST00000545279 MUC2Q02817 5179 aa2.62□□□□□ -1.99
SMAD5-211ENST00000545279 KRTAP19-8Q3LI54 63 aa2.61□□□□□ -1.99
SMAD5-211ENST00000545279 LCE3AQ5TA76 89 aa2.61□□□□□ -1.99
SMAD5-211ENST00000545279 KRTAP10-5P60370 271 aa2.61□□□□□ -1.99
SMAD5-211ENST00000545279 LCE2CQ5TA81 110 aa2.61□□□□□ -1.99
SMAD5-211ENST00000545279 FAT1Q14517 4588 aa2.57□□□□□ -2
SMAD5-211ENST00000545279 KRTAP19-1Q8IUB9 90 aa2.57□□□□□ -2
SMAD5-211ENST00000545279 APOBP04114 4563 aaKnown RBP2.57□□□□□ -2
SMAD5-211ENST00000545279 HMCN2Q8NDA2 5059 aa2.57□□□□□ -2
SMAD5-211ENST00000545279 LCE2BO14633 110 aa2.56□□□□□ -2
SMAD5-211ENST00000545279 LRP1Q07954 4544 aaKnown RBP2.56□□□□□ -2
SMAD5-211ENST00000545279 KRTAP12-4P60329 112 aa2.52□□□□□ -2.01
SMAD5-211ENST00000545279 SYNE2Q8WXH0 6885 aaKnown RBP2.52□□□□□ -2.01
SMAD5-211ENST00000545279 KRTAP9-3Q9BYQ3 159 aa2.49□□□□□ -2.01
SMAD5-211ENST00000545279 NEBP20929 6669 aa2.49□□□□□ -2.01
SMAD5-211ENST00000545279 KRTAP9-8Q9BYQ0 159 aa2.48□□□□□ -2.01
SMAD5-211ENST00000545279 GPR98Q8WXG9 6306 aa2.48□□□□□ -2.01
SMAD5-211ENST00000545279 MT1GP13640 62 aa2.48□□□□□ -2.01
SMAD5-211ENST00000545279 KRTAP19-6Q3LI70 58 aa2.48□□□□□ -2.01
SMAD5-211ENST00000545279 FAT4Q6V0I7 4981 aa2.47□□□□□ -2.01
SMAD5-211ENST00000545279 KRTAP9-7A8MTY7 169 aa2.47□□□□□ -2.01
SMAD5-211ENST00000545279 KRTAP20-1Q3LI63 56 aa2.47□□□□□ -2.01
SMAD5-211ENST00000545279 USH2AO75445 5202 aa2.46□□□□□ -2.01
SMAD5-211ENST00000545279 LCE2AQ5TA79 106 aaPredicted RBP2.46□□□□□ -2.02
SMAD5-211ENST00000545279 KRTAP19-5Q3LI72 72 aa2.45□□□□□ -2.02
SMAD5-211ENST00000545279 KRTAP6-3Q3LI67 103 aa2.44□□□□□ -2.02
SMAD5-211ENST00000545279 MT1BP07438 61 aa2.44□□□□□ -2.02
SMAD5-211ENST00000545279 FSIP2Q5CZC0 6907 aa2.41□□□□□ -2.02
SMAD5-211ENST00000545279 FLGP20930 4061 aaPredicted RBP2.41□□□□□ -2.02
SMAD5-211ENST00000545279 INE1O15225 51 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms