RNA–Protein interactions for RNA: ENST00000545028.2

KLHL1-202, Transcript of kelch like family member 1, humanhuman

TSL 2 BASIC

Gene KLHL1, Length 3,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1-202ENST00000545028 ADM2Q7Z4H4 148 aa5.05□□□□□ -1.6
KLHL1-202ENST00000545028 FAT3Q8TDW7 4589 aa5.05□□□□□ -1.6
KLHL1-202ENST00000545028 MIR22HGQ0VDD5 57 aa5.05□□□□□ -1.6
KLHL1-202ENST00000545028 CDC42SE1Q9NRR8 79 aa5.05□□□□□ -1.6
KLHL1-202ENST00000545028 A0A0D9SG42 100 aa5.04□□□□□ -1.6
KLHL1-202ENST00000545028 RPS29P62273 56 aaKnown RBP5.03□□□□□ -1.6
KLHL1-202ENST00000545028 LINC01558Q9Y6Z2 57 aa5□□□□□ -1.61
KLHL1-202ENST00000545028 Q75L30 129 aa4.98□□□□□ -1.61
KLHL1-202ENST00000545028 HERC1Q15751 4861 aa4.96□□□□□ -1.61
KLHL1-202ENST00000545028 CRIPTQ9P021 101 aa4.96□□□□□ -1.62
KLHL1-202ENST00000545028 DMAC1Q96GE9 116 aa4.95□□□□□ -1.62
KLHL1-202ENST00000545028 CSAG1Q6PB30 78 aa4.94□□□□□ -1.62
KLHL1-202ENST00000545028 A0A1B0GU33 70 aa4.9□□□□□ -1.62
KLHL1-202ENST00000545028 SPATA8Q6RVD6 105 aa4.9□□□□□ -1.63
KLHL1-202ENST00000545028 C20orf166-AS1Q96NR2 134 aa4.89□□□□□ -1.63
KLHL1-202ENST00000545028 A8MUU9 505 aa4.89□□□□□ -1.63
KLHL1-202ENST00000545028 SPINT4Q6UDR6 99 aa4.89□□□□□ -1.63
KLHL1-202ENST00000545028 SEC61BP60468 96 aaKnown RBP4.87□□□□□ -1.63
KLHL1-202ENST00000545028 TPRXLQ17RH7 258 aa4.87□□□□□ -1.63
KLHL1-202ENST00000545028 COX6B2Q6YFQ2 88 aa4.87□□□□□ -1.63
KLHL1-202ENST00000545028 LPAP08519 4548 aa4.86□□□□□ -1.63
KLHL1-202ENST00000545028 XP32Q5T750 250 aa4.86□□□□□ -1.63
KLHL1-202ENST00000545028 LRP2P98164 4655 aa4.84□□□□□ -1.63
KLHL1-202ENST00000545028 ROMO1P60602 79 aa4.81□□□□□ -1.64
KLHL1-202ENST00000545028 RPL37P61927 97 aaKnown RBP4.79□□□□□ -1.64
KLHL1-202ENST00000545028 S4R3F8 94 aa4.77□□□□□ -1.65
KLHL1-202ENST00000545028 KRTAP3-1Q9BYR8 98 aa4.76□□□□□ -1.65
KLHL1-202ENST00000545028 UBR4Q5T4S7 5183 aa4.74□□□□□ -1.65
KLHL1-202ENST00000545028 H1FX-AS1Q4G0G2 97 aa4.72□□□□□ -1.65
KLHL1-202ENST00000545028 HMCN2Q8NDA2 5059 aa4.72□□□□□ -1.65
KLHL1-202ENST00000545028 NDUFAF8A1L188 74 aa4.7□□□□□ -1.66
KLHL1-202ENST00000545028 RNF213Q63HN8 5207 aa4.7□□□□□ -1.66
KLHL1-202ENST00000545028 M0R2T5 61 aa4.69□□□□□ -1.66
KLHL1-202ENST00000545028 LUZP6Q538Z0 58 aa4.68□□□□□ -1.66
KLHL1-202ENST00000545028 R4GN34 69 aa4.65□□□□□ -1.66
KLHL1-202ENST00000545028 M0QZ58 72 aa4.63□□□□□ -1.67
KLHL1-202ENST00000545028 P0C880 135 aa4.62□□□□□ -1.67
KLHL1-202ENST00000545028 H0YAA0 97 aa4.62□□□□□ -1.67
KLHL1-202ENST00000545028 MUC2Q02817 5179 aa4.61□□□□□ -1.67
KLHL1-202ENST00000545028 KRTAP25-1Q3LHN0 102 aa4.6□□□□□ -1.67
KLHL1-202ENST00000545028 KRTAP4-1Q9BYQ7 146 aa4.6□□□□□ -1.67
KLHL1-202ENST00000545028 CAMK2N1Q7Z7J9 78 aa4.6□□□□□ -1.67
KLHL1-202ENST00000545028 MUC17Q685J3 4493 aa4.58□□□□□ -1.68
KLHL1-202ENST00000545028 KRTAP3-3Q9BYR6 98 aa4.57□□□□□ -1.68
KLHL1-202ENST00000545028 C10orf95Q9H7T3 257 aa4.53□□□□□ -1.68
KLHL1-202ENST00000545028 KRTAP10-6P60371 365 aaPredicted RBP4.44□□□□□ -1.7
KLHL1-202ENST00000545028 FAT4Q6V0I7 4981 aa4.43□□□□□ -1.7
KLHL1-202ENST00000545028 KRTAP3-2Q9BYR7 98 aa4.43□□□□□ -1.7
KLHL1-202ENST00000545028 KRTAP13-4Q3LI77 160 aa4.41□□□□□ -1.7
KLHL1-202ENST00000545028 KRTAP19-2Q3LHN2 52 aa4.4□□□□□ -1.7
KLHL1-202ENST00000545028 KRTAP12-2P59991 146 aa4.35□□□□□ -1.71
KLHL1-202ENST00000545028 MT1HP80294 61 aa4.35□□□□□ -1.71
KLHL1-202ENST00000545028 FLGP20930 4061 aaPredicted RBP4.34□□□□□ -1.71
KLHL1-202ENST00000545028 KRTAP10-10P60014 251 aa4.33□□□□□ -1.72
KLHL1-202ENST00000545028 LCE2CQ5TA81 110 aa4.32□□□□□ -1.72
KLHL1-202ENST00000545028 LORP23490 312 aaPredicted RBP4.27□□□□□ -1.73
KLHL1-202ENST00000545028 LCE2DQ5TA82 110 aaPredicted RBP4.26□□□□□ -1.73
KLHL1-202ENST00000545028 KRTAP12-1P59990 96 aa4.25□□□□□ -1.73
KLHL1-202ENST00000545028 PLAC4Q8WY50 150 aa4.24□□□□□ -1.73
KLHL1-202ENST00000545028 KRTAP15-1Q3LI76 137 aa4.23□□□□□ -1.73
KLHL1-202ENST00000545028 FSIP2Q5CZC0 6907 aa4.22□□□□□ -1.73
KLHL1-202ENST00000545028 LCE2AQ5TA79 106 aaPredicted RBP4.21□□□□□ -1.74
KLHL1-202ENST00000545028 MT2AP02795 61 aa4.14□□□□□ -1.75
KLHL1-202ENST00000545028 TNP1P09430 55 aa4.13□□□□□ -1.75
KLHL1-202ENST00000545028 MT1FP04733 61 aa4.12□□□□□ -1.75
KLHL1-202ENST00000545028 KRTAP9-8Q9BYQ0 159 aa4.1□□□□□ -1.75
KLHL1-202ENST00000545028 KRTAP9-2Q9BYQ4 174 aa4.03□□□□□ -1.77
KLHL1-202ENST00000545028 KRTAP19-1Q8IUB9 90 aa3.98□□□□□ -1.77
KLHL1-202ENST00000545028 KRTAP9-3Q9BYQ3 159 aa3.96□□□□□ -1.78
KLHL1-202ENST00000545028 SPRR2GQ9BYE4 73 aa3.95□□□□□ -1.78
KLHL1-202ENST00000545028 USH2AO75445 5202 aa3.94□□□□□ -1.78
KLHL1-202ENST00000545028 LCE2BO14633 110 aa3.92□□□□□ -1.78
KLHL1-202ENST00000545028 PP632Q6XCG6 107 aa3.92□□□□□ -1.78
KLHL1-202ENST00000545028 CRCT1Q9UGL9 99 aa3.87□□□□□ -1.79
KLHL1-202ENST00000545028 PRO2289Q9P1D8 64 aa3.82□□□□□ -1.8
KLHL1-202ENST00000545028 MT1BP07438 61 aa3.81□□□□□ -1.8
KLHL1-202ENST00000545028 KRTAP19-8Q3LI54 63 aa3.81□□□□□ -1.8
KLHL1-202ENST00000545028 KRTAP9-6A0A140TA67 174 aa3.8□□□□□ -1.8
KLHL1-202ENST00000545028 SSPOA2VEC9 5147 aa3.79□□□□□ -1.8
KLHL1-202ENST00000545028 MT1XP80297 61 aa3.73□□□□□ -1.81
KLHL1-202ENST00000545028 KRTAP10-5P60370 271 aa3.72□□□□□ -1.81
KLHL1-202ENST00000545028 LCE3AQ5TA76 89 aa3.72□□□□□ -1.81
KLHL1-202ENST00000545028 FCGBPQ9Y6R7 5405 aaPredicted RBP3.68□□□□□ -1.82
KLHL1-202ENST00000545028 KRTAP19-6Q3LI70 58 aa3.67□□□□□ -1.82
KLHL1-202ENST00000545028 KRTAP10-12P60413 245 aa3.65□□□□□ -1.83
KLHL1-202ENST00000545028 KMT2DO14686 5537 aa3.64□□□□□ -1.83
KLHL1-202ENST00000545028 KRTAP23-1A1A580 65 aa3.64□□□□□ -1.83
KLHL1-202ENST00000545028 KRTAP10-7P60409 375 aaPredicted RBP3.62□□□□□ -1.83
KLHL1-202ENST00000545028 KRTAP12-3P60328 96 aa3.6□□□□□ -1.83
KLHL1-202ENST00000545028 SYNE2Q8WXH0 6885 aaKnown RBP3.6□□□□□ -1.83
KLHL1-202ENST00000545028 MACF1Q9UPN3 7388 aaKnown RBP3.59□□□□□ -1.83
KLHL1-202ENST00000545028 OBSCNQ5VST9 7968 aa3.55□□□□□ -1.84
KLHL1-202ENST00000545028 INE1O15225 51 aa3.55□□□□□ -1.84
KLHL1-202ENST00000545028 KRTAP8-1Q8IUC2 63 aa3.55□□□□□ -1.84
KLHL1-202ENST00000545028 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.53□□□□□ -1.84
KLHL1-202ENST00000545028 KRTAP4-8A0A0G2JLE6 195 aa3.53□□□□□ -1.85
KLHL1-202ENST00000545028 KRTAP4-8Q9BYQ9 185 aa3.53□□□□□ -1.85
KLHL1-202ENST00000545028 SPRR2FQ96RM1 72 aa3.5□□□□□ -1.85
KLHL1-202ENST00000545028 KRTAP9-7A8MTY7 169 aa3.48□□□□□ -1.85
KLHL1-202ENST00000545028 KRTAP19-5Q3LI72 72 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms