RNA–Protein interactions for RNA: ENST00000544455.5

BRCA2-206, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA2, Length 10,984 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-206ENST00000544455 ABCA13Q86UQ4 5058 aa1.95□□□□□ -2.1
BRCA2-206ENST00000544455 MYCBP2O75592 4640 aa1.95□□□□□ -2.1
BRCA2-206ENST00000544455 RPL37P61927 97 aaKnown RBP1.94□□□□□ -2.1
BRCA2-206ENST00000544455 OBSCNQ5VST9 7968 aa1.94□□□□□ -2.1
BRCA2-206ENST00000544455 CRIPTQ9P021 101 aa1.94□□□□□ -2.1
BRCA2-206ENST00000544455 COX6B2Q6YFQ2 88 aa1.94□□□□□ -2.1
BRCA2-206ENST00000544455 PKHD1L1Q86WI1 4243 aa1.94□□□□□ -2.1
BRCA2-206ENST00000544455 LINC01554Q52M75 96 aa1.94□□□□□ -2.1
BRCA2-206ENST00000544455 H0YAA0 97 aa1.93□□□□□ -2.1
BRCA2-206ENST00000544455 A0A0D9SG42 100 aa1.93□□□□□ -2.1
BRCA2-206ENST00000544455 KRTAP3-3Q9BYR6 98 aa1.92□□□□□ -2.1
BRCA2-206ENST00000544455 HSPG2P98160 4391 aa1.91□□□□□ -2.1
BRCA2-206ENST00000544455 A0A1B0GU33 70 aa1.91□□□□□ -2.1
BRCA2-206ENST00000544455 KRTAP13-4Q3LI77 160 aa1.9□□□□□ -2.1
BRCA2-206ENST00000544455 S4R3F8 94 aa1.9□□□□□ -2.1
BRCA2-206ENST00000544455 H1FX-AS1Q4G0G2 97 aa1.9□□□□□ -2.11
BRCA2-206ENST00000544455 P0C880 135 aa1.89□□□□□ -2.11
BRCA2-206ENST00000544455 LRP2P98164 4655 aa1.89□□□□□ -2.11
BRCA2-206ENST00000544455 J3QL48 77 aa1.88□□□□□ -2.11
BRCA2-206ENST00000544455 KRTAP10-6P60371 365 aaPredicted RBP1.88□□□□□ -2.11
BRCA2-206ENST00000544455 CSAG1Q6PB30 78 aa1.87□□□□□ -2.11
BRCA2-206ENST00000544455 MUC2Q02817 5179 aa1.87□□□□□ -2.11
BRCA2-206ENST00000544455 KRTAP4-1Q9BYQ7 146 aa1.87□□□□□ -2.11
BRCA2-206ENST00000544455 KRTAP3-2Q9BYR7 98 aa1.86□□□□□ -2.11
BRCA2-206ENST00000544455 TPRXLQ17RH7 258 aa1.86□□□□□ -2.11
BRCA2-206ENST00000544455 K7ERS5 55 aa1.84□□□□□ -2.11
BRCA2-206ENST00000544455 LORP23490 312 aaPredicted RBP1.84□□□□□ -2.11
BRCA2-206ENST00000544455 SPINT4Q6UDR6 99 aa1.84□□□□□ -2.12
BRCA2-206ENST00000544455 TNXBP22105 4242 aa1.84□□□□□ -2.12
BRCA2-206ENST00000544455 HERC2O95714 4834 aa1.83□□□□□ -2.12
BRCA2-206ENST00000544455 KRTAP12-2P59991 146 aa1.83□□□□□ -2.12
BRCA2-206ENST00000544455 KRTAP25-1Q3LHN0 102 aa1.83□□□□□ -2.12
BRCA2-206ENST00000544455 C10orf95Q9H7T3 257 aa1.82□□□□□ -2.12
BRCA2-206ENST00000544455 ROMO1P60602 79 aa1.82□□□□□ -2.12
BRCA2-206ENST00000544455 M0QZ58 72 aa1.8□□□□□ -2.12
BRCA2-206ENST00000544455 HMCN2Q8NDA2 5059 aa1.8□□□□□ -2.12
BRCA2-206ENST00000544455 FLG2Q5D862 2391 aaPredicted RBP1.8□□□□□ -2.12
BRCA2-206ENST00000544455 PCLOQ9Y6V0 5065 aa1.8□□□□□ -2.12
BRCA2-206ENST00000544455 KRTAP12-1P59990 96 aa1.78□□□□□ -2.12
BRCA2-206ENST00000544455 SEC61BP60468 96 aaKnown RBP1.78□□□□□ -2.12
BRCA2-206ENST00000544455 HERC1Q15751 4861 aa1.78□□□□□ -2.12
BRCA2-206ENST00000544455 R4GN34 69 aa1.78□□□□□ -2.12
BRCA2-206ENST00000544455 BIRC6Q9NR09 4857 aa1.78□□□□□ -2.12
BRCA2-206ENST00000544455 UBR4Q5T4S7 5183 aa1.76□□□□□ -2.13
BRCA2-206ENST00000544455 KRTAP19-2Q3LHN2 52 aa1.76□□□□□ -2.13
BRCA2-206ENST00000544455 MUC17Q685J3 4493 aa1.74□□□□□ -2.13
BRCA2-206ENST00000544455 DSTQ03001 7570 aaKnown RBP1.72□□□□□ -2.13
BRCA2-206ENST00000544455 M0R2T5 61 aa1.71□□□□□ -2.14
BRCA2-206ENST00000544455 H3BS24 57 aa1.7□□□□□ -2.14
BRCA2-206ENST00000544455 RNF213Q63HN8 5207 aa1.7□□□□□ -2.14
BRCA2-206ENST00000544455 DMBT1Q9UGM3 2413 aaPredicted RBP1.69□□□□□ -2.14
BRCA2-206ENST00000544455 LCE2CQ5TA81 110 aa1.69□□□□□ -2.14
BRCA2-206ENST00000544455 CAMK2N1Q7Z7J9 78 aa1.69□□□□□ -2.14
BRCA2-206ENST00000544455 MT1HP80294 61 aa1.67□□□□□ -2.14
BRCA2-206ENST00000544455 SYNE1Q8NF91 8797 aaKnown RBP1.67□□□□□ -2.14
BRCA2-206ENST00000544455 USH2AO75445 5202 aa1.66□□□□□ -2.14
BRCA2-206ENST00000544455 KRTAP15-1Q3LI76 137 aa1.66□□□□□ -2.14
BRCA2-206ENST00000544455 KRTAP10-10P60014 251 aa1.64□□□□□ -2.15
BRCA2-206ENST00000544455 MT1FP04733 61 aa1.63□□□□□ -2.15
BRCA2-206ENST00000544455 FSIP2Q5CZC0 6907 aa1.63□□□□□ -2.15
BRCA2-206ENST00000544455 PP632Q6XCG6 107 aa1.62□□□□□ -2.15
BRCA2-206ENST00000544455 NDUFAF8A1L188 74 aa1.62□□□□□ -2.15
BRCA2-206ENST00000544455 MT2AP02795 61 aa1.62□□□□□ -2.15
BRCA2-206ENST00000544455 MACF1Q9UPN3 7388 aaKnown RBP1.62□□□□□ -2.15
BRCA2-206ENST00000544455 KRTAP19-1Q8IUB9 90 aa1.61□□□□□ -2.15
BRCA2-206ENST00000544455 KRTAP9-8Q9BYQ0 159 aa1.6□□□□□ -2.15
BRCA2-206ENST00000544455 PLAC4Q8WY50 150 aa1.59□□□□□ -2.15
BRCA2-206ENST00000544455 SPRR2GQ9BYE4 73 aa1.58□□□□□ -2.16
BRCA2-206ENST00000544455 TNP1P09430 55 aa1.58□□□□□ -2.16
BRCA2-206ENST00000544455 LUZP6Q538Z0 58 aa1.57□□□□□ -2.16
BRCA2-206ENST00000544455 LCE3AQ5TA76 89 aa1.57□□□□□ -2.16
BRCA2-206ENST00000544455 KRTAP23-1A1A580 65 aa1.57□□□□□ -2.16
BRCA2-206ENST00000544455 MT1BP07438 61 aa1.55□□□□□ -2.16
BRCA2-206ENST00000544455 FLGP20930 4061 aaPredicted RBP1.54□□□□□ -2.16
BRCA2-206ENST00000544455 KRTAP10-5P60370 271 aa1.53□□□□□ -2.16
BRCA2-206ENST00000544455 KRTAP10-7P60409 375 aaPredicted RBP1.53□□□□□ -2.16
BRCA2-206ENST00000544455 KRTAP9-3Q9BYQ3 159 aa1.53□□□□□ -2.16
BRCA2-206ENST00000544455 MT1XP80297 61 aa1.52□□□□□ -2.17
BRCA2-206ENST00000544455 SPRR5A0A1B0GTR4 108 aa1.52□□□□□ -2.17
BRCA2-206ENST00000544455 A0A0A0MQY5 61 aa1.51□□□□□ -2.17
BRCA2-206ENST00000544455 LCE2BO14633 110 aa1.51□□□□□ -2.17
BRCA2-206ENST00000544455 FCGBPQ9Y6R7 5405 aaPredicted RBP1.5□□□□□ -2.17
BRCA2-206ENST00000544455 KRTAP19-8Q3LI54 63 aa1.5□□□□□ -2.17
BRCA2-206ENST00000544455 KRTAP4-8A0A0G2JLE6 195 aa1.49□□□□□ -2.17
BRCA2-206ENST00000544455 KRTAP4-8Q9BYQ9 185 aa1.49□□□□□ -2.17
BRCA2-206ENST00000544455 SSPOA2VEC9 5147 aa1.48□□□□□ -2.17
BRCA2-206ENST00000544455 KRTAP10-12P60413 245 aa1.48□□□□□ -2.17
BRCA2-206ENST00000544455 KMT2DO14686 5537 aa1.47□□□□□ -2.17
BRCA2-206ENST00000544455 LCE2AQ5TA79 106 aaPredicted RBP1.47□□□□□ -2.17
BRCA2-206ENST00000544455 KRTAP8-1Q8IUC2 63 aa1.46□□□□□ -2.18
BRCA2-206ENST00000544455 KRTAP12-3P60328 96 aa1.45□□□□□ -2.18
BRCA2-206ENST00000544455 KRTAP19-5Q3LI72 72 aa1.43□□□□□ -2.18
BRCA2-206ENST00000544455 KRTAP4-7Q9BYR0 210 aa1.43□□□□□ -2.18
BRCA2-206ENST00000544455 KRTAP19-4Q3LI73 84 aa1.42□□□□□ -2.18
BRCA2-206ENST00000544455 PRO2289Q9P1D8 64 aa1.42□□□□□ -2.18
BRCA2-206ENST00000544455 SYNE2Q8WXH0 6885 aaKnown RBP1.41□□□□□ -2.18
BRCA2-206ENST00000544455 INE1O15225 51 aa1.38□□□□□ -2.19
BRCA2-206ENST00000544455 MUC12Q9UKN1 5478 aa1.37□□□□□ -2.19
BRCA2-206ENST00000544455 LCE3CQ5T5A8 94 aa1.36□□□□□ -2.19
BRCA2-206ENST00000544455 KRTAP19-7Q3SYF9 63 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms