RNA–Protein interactions for RNA: ENST00000544057.1

PHOX2A-202, Transcript of paired like homeobox 2A, humanhuman

TSL 3

Gene PHOX2A, Length 605 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2A-202ENST00000544057 SMIM20Q8N5G0 67 aa13.71□□□□□ -0.21
PHOX2A-202ENST00000544057 KRTAP3-3Q9BYR6 98 aa13.65□□□□□ -0.22
PHOX2A-202ENST00000544057 FAM236AA0A1B0GUQ0 79 aa13.64□□□□□ -0.23
PHOX2A-202ENST00000544057 FAM236BA0A1B0GV22 79 aa13.64□□□□□ -0.23
PHOX2A-202ENST00000544057 TRAV7A0A075B6U4 112 aa13.6□□□□□ -0.23
PHOX2A-202ENST00000544057 NDUFC1O43677 76 aa13.6□□□□□ -0.23
PHOX2A-202ENST00000544057 SSPOA2VEC9 5147 aa13.53□□□□□ -0.24
PHOX2A-202ENST00000544057 DMAC1Q96GE9 116 aa13.43□□□□□ -0.26
PHOX2A-202ENST00000544057 H0YAA0 97 aa13.36□□□□□ -0.27
PHOX2A-202ENST00000544057 KRTAP19-1Q8IUB9 90 aa13.34□□□□□ -0.27
PHOX2A-202ENST00000544057 CRIPTQ9P021 101 aa13.31□□□□□ -0.28
PHOX2A-202ENST00000544057 SERP2Q8N6R1 65 aa13.28□□□□□ -0.28
PHOX2A-202ENST00000544057 SPRR2GQ9BYE4 73 aa13.28□□□□□ -0.28
PHOX2A-202ENST00000544057 ACYP2P14621 99 aa13.25□□□□□ -0.29
PHOX2A-202ENST00000544057 KRTAP19-6Q3LI70 58 aa13.23□□□□□ -0.29
PHOX2A-202ENST00000544057 SNURFQ9Y675 71 aa13.22□□□□□ -0.29
PHOX2A-202ENST00000544057 FCGBPQ9Y6R7 5405 aaPredicted RBP13.19□□□□□ -0.3
PHOX2A-202ENST00000544057 ADM2Q7Z4H4 148 aa13.18□□□□□ -0.3
PHOX2A-202ENST00000544057 C20orf197Q8N268 126 aa13.16□□□□□ -0.3
PHOX2A-202ENST00000544057 Q5VV11 94 aa13.13□□□□□ -0.31
PHOX2A-202ENST00000544057 KRTAP19-8Q3LI54 63 aa13.12□□□□□ -0.31
PHOX2A-202ENST00000544057 SPANXA2-OT1Q8N9U9 137 aa13.09□□□□□ -0.31
PHOX2A-202ENST00000544057 SPTSSBQ8NFR3 76 aa13.06□□□□□ -0.32
PHOX2A-202ENST00000544057 MT1BP07438 61 aa13.01□□□□□ -0.33
PHOX2A-202ENST00000544057 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.99□□□□□ -0.33
PHOX2A-202ENST00000544057 CHKB-CPT1BH3BT56 60 aa12.99□□□□□ -0.33
PHOX2A-202ENST00000544057 COX7CP15954 63 aa12.97□□□□□ -0.33
PHOX2A-202ENST00000544057 P0C880 135 aa12.87□□□□□ -0.35
PHOX2A-202ENST00000544057 R4GN34 69 aa12.86□□□□□ -0.35
PHOX2A-202ENST00000544057 KRTAP3-2Q9BYR7 98 aa12.83□□□□□ -0.36
PHOX2A-202ENST00000544057 A6NN06 94 aa12.81□□□□□ -0.36
PHOX2A-202ENST00000544057 KRTAP9-7A8MTY7 169 aa12.73□□□□□ -0.37
PHOX2A-202ENST00000544057 M0QZ58 72 aa12.73□□□□□ -0.37
PHOX2A-202ENST00000544057 MACF1Q9UPN3 7388 aaKnown RBP12.72□□□□□ -0.37
PHOX2A-202ENST00000544057 ANAPC13Q9BS18 74 aa12.71□□□□□ -0.37
PHOX2A-202ENST00000544057 KRTAP10-5P60370 271 aa12.69□□□□□ -0.38
PHOX2A-202ENST00000544057 H7BZZ5 65 aa12.66□□□□□ -0.38
PHOX2A-202ENST00000544057 COA5Q86WW8 74 aa12.64□□□□□ -0.39
PHOX2A-202ENST00000544057 PLAC4Q8WY50 150 aa12.63□□□□□ -0.39
PHOX2A-202ENST00000544057 CYSTM1Q9H1C7 97 aa12.58□□□□□ -0.4
PHOX2A-202ENST00000544057 SYNE2Q8WXH0 6885 aaKnown RBP12.52□□□□□ -0.41
PHOX2A-202ENST00000544057 LINC01554Q52M75 96 aa12.51□□□□□ -0.41
PHOX2A-202ENST00000544057 PRO2289Q9P1D8 64 aa12.48□□□□□ -0.41
PHOX2A-202ENST00000544057 SEC61GP60059 68 aa12.39□□□□□ -0.43
PHOX2A-202ENST00000544057 CCDC179H3BU77 68 aa12.38□□□□□ -0.43
PHOX2A-202ENST00000544057 KRTAP6-3Q3LI67 103 aa12.34□□□□□ -0.43
PHOX2A-202ENST00000544057 SERP1Q9Y6X1 66 aa12.34□□□□□ -0.43
PHOX2A-202ENST00000544057 MT1XP80297 61 aa12.31□□□□□ -0.44
PHOX2A-202ENST00000544057 ATP5EP56381 51 aaPredicted RBP12.26□□□□□ -0.45
PHOX2A-202ENST00000544057 KRTAP13-4Q3LI77 160 aa12.15□□□□□ -0.46
PHOX2A-202ENST00000544057 A0A1B0GU33 70 aa12.07□□□□□ -0.48
PHOX2A-202ENST00000544057 A0A1B0GU69 56 aa12.04□□□□□ -0.48
PHOX2A-202ENST00000544057 TMEM258P61165 79 aa12.03□□□□□ -0.48
PHOX2A-202ENST00000544057 KRTAP12-2P59991 146 aa12.02□□□□□ -0.49
PHOX2A-202ENST00000544057 KRTAP5-9P26371 169 aa11.92□□□□□ -0.5
PHOX2A-202ENST00000544057 SPATA8Q6RVD6 105 aa11.92□□□□□ -0.5
PHOX2A-202ENST00000544057 CAMK2N1Q7Z7J9 78 aa11.89□□□□□ -0.51
PHOX2A-202ENST00000544057 A0A0D9SG42 100 aa11.88□□□□□ -0.51
PHOX2A-202ENST00000544057 PRR15LQ9BU68 103 aa11.86□□□□□ -0.51
PHOX2A-202ENST00000544057 KMT2DO14686 5537 aa11.85□□□□□ -0.51
PHOX2A-202ENST00000544057 MUC12Q9UKN1 5478 aa11.83□□□□□ -0.52
PHOX2A-202ENST00000544057 SMIM26A0A096LP01 95 aa11.78□□□□□ -0.52
PHOX2A-202ENST00000544057 KRTAP8-1Q8IUC2 63 aa11.76□□□□□ -0.53
PHOX2A-202ENST00000544057 LINC01558Q9Y6Z2 57 aa11.76□□□□□ -0.53
PHOX2A-202ENST00000544057 NEBP20929 6669 aa11.75□□□□□ -0.53
PHOX2A-202ENST00000544057 KRTAP10-7P60409 375 aaPredicted RBP11.74□□□□□ -0.53
PHOX2A-202ENST00000544057 KRTAP10-12P60413 245 aa11.74□□□□□ -0.53
PHOX2A-202ENST00000544057 SPINT4Q6UDR6 99 aa11.73□□□□□ -0.53
PHOX2A-202ENST00000544057 KRTAP12-1P59990 96 aa11.65□□□□□ -0.54
PHOX2A-202ENST00000544057 SPRR2FQ96RM1 72 aa11.65□□□□□ -0.54
PHOX2A-202ENST00000544057 KRTAP4-8A0A0G2JLE6 195 aa11.61□□□□□ -0.55
PHOX2A-202ENST00000544057 KRTAP4-8Q9BYQ9 185 aa11.61□□□□□ -0.55
PHOX2A-202ENST00000544057 MDN1Q9NU22 5596 aa11.55□□□□□ -0.56
PHOX2A-202ENST00000544057 A8MU10 97 aa11.53□□□□□ -0.56
PHOX2A-202ENST00000544057 UQCR11O14957 56 aa11.43□□□□□ -0.58
PHOX2A-202ENST00000544057 PCP4P48539 62 aa11.42□□□□□ -0.58
PHOX2A-202ENST00000544057 V9GYY9 64 aa11.39□□□□□ -0.59
PHOX2A-202ENST00000544057 SPRR2EP22531 72 aa11.38□□□□□ -0.59
PHOX2A-202ENST00000544057 SPRR2BP35325 72 aa11.38□□□□□ -0.59
PHOX2A-202ENST00000544057 SPRR2AP35326 72 aa11.38□□□□□ -0.59
PHOX2A-202ENST00000544057 LCE1AQ5T7P2 110 aa11.27□□□□□ -0.61
PHOX2A-202ENST00000544057 Q1T7F1 81 aa11.25□□□□□ -0.61
PHOX2A-202ENST00000544057 KRTAP20-1Q3LI63 56 aa11.22□□□□□ -0.61
PHOX2A-202ENST00000544057 MIR22HGQ0VDD5 57 aa11.18□□□□□ -0.62
PHOX2A-202ENST00000544057 PSPHP1O15172 72 aa11.14□□□□□ -0.63
PHOX2A-202ENST00000544057 TNP1P09430 55 aa11.09□□□□□ -0.63
PHOX2A-202ENST00000544057 C10orf95Q9H7T3 257 aa11.09□□□□□ -0.63
PHOX2A-202ENST00000544057 KRTAP2-3P0C7H8 128 aa11.07□□□□□ -0.64
PHOX2A-202ENST00000544057 KRTAP2-4Q9BYR9 128 aa11.07□□□□□ -0.64
PHOX2A-202ENST00000544057 RPS28P62857 69 aaKnown RBP11.04□□□□□ -0.64
PHOX2A-202ENST00000544057 SPRR2DP22532 72 aa11.01□□□□□ -0.65
PHOX2A-202ENST00000544057 K7ERS5 55 aa10.99□□□□□ -0.65
PHOX2A-202ENST00000544057 KRTAP19-7Q3SYF9 63 aa10.99□□□□□ -0.65
PHOX2A-202ENST00000544057 MT1EP04732 61 aa10.9□□□□□ -0.66
PHOX2A-202ENST00000544057 A6NED7 52 aa10.84□□□□□ -0.67
PHOX2A-202ENST00000544057 KRTAP19-5Q3LI72 72 aa10.83□□□□□ -0.68
PHOX2A-202ENST00000544057 LCE3AQ5TA76 89 aa10.78□□□□□ -0.68
PHOX2A-202ENST00000544057 KRTAP19-3Q7Z4W3 81 aa10.75□□□□□ -0.69
PHOX2A-202ENST00000544057 KRTAP2-2Q9BYT5 123 aa10.74□□□□□ -0.69
PHOX2A-202ENST00000544057 KRTAP2-1Q9BYU5 128 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms