RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 KRTAP9-8Q9BYQ0 159 aa6.93□□□□□ -1.3
TNFRSF1A-216ENST00000543995 CSAG1Q6PB30 78 aa6.91□□□□□ -1.3
TNFRSF1A-216ENST00000543995 DMAC1Q96GE9 116 aa6.9□□□□□ -1.31
TNFRSF1A-216ENST00000543995 MT2AP02795 61 aa6.88□□□□□ -1.31
TNFRSF1A-216ENST00000543995 H7BZZ5 65 aa6.87□□□□□ -1.31
TNFRSF1A-216ENST00000543995 KRTAP3-3Q9BYR6 98 aa6.86□□□□□ -1.31
TNFRSF1A-216ENST00000543995 KRTAP10-10P60014 251 aa6.85□□□□□ -1.31
TNFRSF1A-216ENST00000543995 MT1FP04733 61 aa6.83□□□□□ -1.32
TNFRSF1A-216ENST00000543995 ACYP2P14621 99 aa6.83□□□□□ -1.32
TNFRSF1A-216ENST00000543995 TMEM258P61165 79 aa6.83□□□□□ -1.32
TNFRSF1A-216ENST00000543995 SPANXA2-OT1Q8N9U9 137 aa6.83□□□□□ -1.32
TNFRSF1A-216ENST00000543995 KRTAP9-2Q9BYQ4 174 aa6.81□□□□□ -1.32
TNFRSF1A-216ENST00000543995 LCE2DQ5TA82 110 aaPredicted RBP6.81□□□□□ -1.32
TNFRSF1A-216ENST00000543995 ATP5EP56381 51 aaPredicted RBP6.78□□□□□ -1.32
TNFRSF1A-216ENST00000543995 CHKB-CPT1BH3BT56 60 aa6.74□□□□□ -1.33
TNFRSF1A-216ENST00000543995 KRTAP9-3Q9BYQ3 159 aa6.7□□□□□ -1.34
TNFRSF1A-216ENST00000543995 SPTSSBQ8NFR3 76 aa6.69□□□□□ -1.34
TNFRSF1A-216ENST00000543995 H0YAA0 97 aa6.66□□□□□ -1.34
TNFRSF1A-216ENST00000543995 ADM2Q7Z4H4 148 aa6.65□□□□□ -1.35
TNFRSF1A-216ENST00000543995 COA5Q86WW8 74 aa6.64□□□□□ -1.35
TNFRSF1A-216ENST00000543995 SERP1Q9Y6X1 66 aa6.62□□□□□ -1.35
TNFRSF1A-216ENST00000543995 RPS28P62857 69 aaKnown RBP6.61□□□□□ -1.35
TNFRSF1A-216ENST00000543995 LCE2BO14633 110 aa6.59□□□□□ -1.35
TNFRSF1A-216ENST00000543995 CRIPTQ9P021 101 aa6.56□□□□□ -1.36
TNFRSF1A-216ENST00000543995 KRTAP19-1Q8IUB9 90 aa6.53□□□□□ -1.36
TNFRSF1A-216ENST00000543995 P0C880 135 aa6.52□□□□□ -1.37
TNFRSF1A-216ENST00000543995 SPRR2GQ9BYE4 73 aa6.51□□□□□ -1.37
TNFRSF1A-216ENST00000543995 FSIP2Q5CZC0 6907 aa6.51□□□□□ -1.37
TNFRSF1A-216ENST00000543995 KRTAP3-2Q9BYR7 98 aa6.5□□□□□ -1.37
TNFRSF1A-216ENST00000543995 CRCT1Q9UGL9 99 aa6.5□□□□□ -1.37
TNFRSF1A-216ENST00000543995 KRTAP9-6A0A140TA67 174 aa6.46□□□□□ -1.37
TNFRSF1A-216ENST00000543995 SMIM26A0A096LP01 95 aa6.45□□□□□ -1.38
TNFRSF1A-216ENST00000543995 R4GN34 69 aa6.45□□□□□ -1.38
TNFRSF1A-216ENST00000543995 USH2AO75445 5202 aa6.44□□□□□ -1.38
TNFRSF1A-216ENST00000543995 M0QZ58 72 aa6.42□□□□□ -1.38
TNFRSF1A-216ENST00000543995 SEC61GP60059 68 aa6.41□□□□□ -1.38
TNFRSF1A-216ENST00000543995 Q5VV11 94 aa6.41□□□□□ -1.38
TNFRSF1A-216ENST00000543995 KRTAP19-8Q3LI54 63 aa6.4□□□□□ -1.38
TNFRSF1A-216ENST00000543995 V9GYY9 64 aa6.36□□□□□ -1.39
TNFRSF1A-216ENST00000543995 MT1BP07438 61 aa6.35□□□□□ -1.39
TNFRSF1A-216ENST00000543995 Q1T7F1 81 aa6.33□□□□□ -1.4
TNFRSF1A-216ENST00000543995 LINC01554Q52M75 96 aa6.33□□□□□ -1.4
TNFRSF1A-216ENST00000543995 A0A1B0GU69 56 aa6.31□□□□□ -1.4
TNFRSF1A-216ENST00000543995 SSPOA2VEC9 5147 aa6.31□□□□□ -1.4
TNFRSF1A-216ENST00000543995 LINC01558Q9Y6Z2 57 aa6.3□□□□□ -1.4
TNFRSF1A-216ENST00000543995 KRTAP19-6Q3LI70 58 aa6.3□□□□□ -1.4
TNFRSF1A-216ENST00000543995 PLAC4Q8WY50 150 aa6.25□□□□□ -1.41
TNFRSF1A-216ENST00000543995 A0A1B0GU33 70 aa6.24□□□□□ -1.41
TNFRSF1A-216ENST00000543995 PRR15LQ9BU68 103 aa6.24□□□□□ -1.41
TNFRSF1A-216ENST00000543995 KRTAP13-4Q3LI77 160 aa6.23□□□□□ -1.41
TNFRSF1A-216ENST00000543995 A6NN06 94 aa6.19□□□□□ -1.42
TNFRSF1A-216ENST00000543995 PSPHP1O15172 72 aa6.18□□□□□ -1.42
TNFRSF1A-216ENST00000543995 SPATA8Q6RVD6 105 aa6.18□□□□□ -1.42
TNFRSF1A-216ENST00000543995 KRTAP10-5P60370 271 aa6.15□□□□□ -1.43
TNFRSF1A-216ENST00000543995 FCGBPQ9Y6R7 5405 aaPredicted RBP6.13□□□□□ -1.43
TNFRSF1A-216ENST00000543995 A0A0D9SG42 100 aa6.13□□□□□ -1.43
TNFRSF1A-216ENST00000543995 PRO2289Q9P1D8 64 aa6.09□□□□□ -1.43
TNFRSF1A-216ENST00000543995 MT1XP80297 61 aa6.06□□□□□ -1.44
TNFRSF1A-216ENST00000543995 UQCR11O14957 56 aa6.04□□□□□ -1.44
TNFRSF1A-216ENST00000543995 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.03□□□□□ -1.44
TNFRSF1A-216ENST00000543995 A6NED7 52 aa6.02□□□□□ -1.45
TNFRSF1A-216ENST00000543995 SPINT4Q6UDR6 99 aa6.02□□□□□ -1.45
TNFRSF1A-216ENST00000543995 A8MU10 97 aa6.01□□□□□ -1.45
TNFRSF1A-216ENST00000543995 CAMK2N1Q7Z7J9 78 aa6□□□□□ -1.45
TNFRSF1A-216ENST00000543995 KRTAP12-1P59990 96 aa5.98□□□□□ -1.45
TNFRSF1A-216ENST00000543995 MACF1Q9UPN3 7388 aaKnown RBP5.96□□□□□ -1.46
TNFRSF1A-216ENST00000543995 KRTAP12-2P59991 146 aa5.94□□□□□ -1.46
TNFRSF1A-216ENST00000543995 MIR22HGQ0VDD5 57 aa5.94□□□□□ -1.46
TNFRSF1A-216ENST00000543995 CDC42SE1Q9NRR8 79 aa5.91□□□□□ -1.46
TNFRSF1A-216ENST00000543995 BRK1Q8WUW1 75 aa5.89□□□□□ -1.47
TNFRSF1A-216ENST00000543995 KRTAP9-7A8MTY7 169 aa5.85□□□□□ -1.47
TNFRSF1A-216ENST00000543995 SYNE2Q8WXH0 6885 aaKnown RBP5.84□□□□□ -1.48
TNFRSF1A-216ENST00000543995 KRTAP10-7P60409 375 aaPredicted RBP5.79□□□□□ -1.48
TNFRSF1A-216ENST00000543995 K7ERS5 55 aa5.76□□□□□ -1.49
TNFRSF1A-216ENST00000543995 KRTAP10-12P60413 245 aa5.75□□□□□ -1.49
TNFRSF1A-216ENST00000543995 KRTAP6-3Q3LI67 103 aa5.75□□□□□ -1.49
TNFRSF1A-216ENST00000543995 PRO0628Q9UI54 55 aa5.75□□□□□ -1.49
TNFRSF1A-216ENST00000543995 KRTAP4-8A0A0G2JLE6 195 aa5.69□□□□□ -1.5
TNFRSF1A-216ENST00000543995 KRTAP8-1Q8IUC2 63 aa5.69□□□□□ -1.5
TNFRSF1A-216ENST00000543995 KRTAP4-8Q9BYQ9 185 aa5.69□□□□□ -1.5
TNFRSF1A-216ENST00000543995 C10orf95Q9H7T3 257 aa5.68□□□□□ -1.5
TNFRSF1A-216ENST00000543995 KMT2DO14686 5537 aa5.68□□□□□ -1.5
TNFRSF1A-216ENST00000543995 KRTAP5-9P26371 169 aa5.63□□□□□ -1.51
TNFRSF1A-216ENST00000543995 TNP1P09430 55 aa5.62□□□□□ -1.51
TNFRSF1A-216ENST00000543995 PMAIP1Q13794 54 aa5.59□□□□□ -1.51
TNFRSF1A-216ENST00000543995 SPRR2FQ96RM1 72 aa5.59□□□□□ -1.51
TNFRSF1A-216ENST00000543995 KRTAP25-1Q3LHN0 102 aa5.47□□□□□ -1.53
TNFRSF1A-216ENST00000543995 MUC12Q9UKN1 5478 aa5.47□□□□□ -1.53
TNFRSF1A-216ENST00000543995 ROMO1P60602 79 aa5.46□□□□□ -1.54
TNFRSF1A-216ENST00000543995 LCE3AQ5TA76 89 aa5.45□□□□□ -1.54
TNFRSF1A-216ENST00000543995 SPRR2EP22531 72 aa5.43□□□□□ -1.54
TNFRSF1A-216ENST00000543995 SPRR2BP35325 72 aa5.43□□□□□ -1.54
TNFRSF1A-216ENST00000543995 SPRR2AP35326 72 aa5.43□□□□□ -1.54
TNFRSF1A-216ENST00000543995 NEBP20929 6669 aa5.42□□□□□ -1.54
TNFRSF1A-216ENST00000543995 KRTAP19-7Q3SYF9 63 aa5.39□□□□□ -1.55
TNFRSF1A-216ENST00000543995 KRTAP19-5Q3LI72 72 aa5.38□□□□□ -1.55
TNFRSF1A-216ENST00000543995 LCE1AQ5T7P2 110 aa5.37□□□□□ -1.55
TNFRSF1A-216ENST00000543995 MT1EP04732 61 aa5.33□□□□□ -1.56
TNFRSF1A-216ENST00000543995 MDN1Q9NU22 5596 aa5.33□□□□□ -1.56
TNFRSF1A-216ENST00000543995 KTN1-AS1Q86SY8 53 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms