RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 UBR4Q5T4S7 5183 aa7.32□□□□□ -1.24
PPME1-208ENST00000543525 LCE2AQ5TA79 106 aaPredicted RBP7.31□□□□□ -1.24
PPME1-208ENST00000543525 DMBT1Q9UGM3 2413 aaPredicted RBP7.29□□□□□ -1.24
PPME1-208ENST00000543525 RBM12B-AS1Q9P1G2 102 aa7.24□□□□□ -1.25
PPME1-208ENST00000543525 LORP23490 312 aaPredicted RBP7.23□□□□□ -1.25
PPME1-208ENST00000543525 PKHD1L1Q86WI1 4243 aa7.22□□□□□ -1.25
PPME1-208ENST00000543525 KRTAP3-1Q9BYR8 98 aa7.2□□□□□ -1.26
PPME1-208ENST00000543525 MYCBP2O75592 4640 aa7.2□□□□□ -1.26
PPME1-208ENST00000543525 FAT1Q14517 4588 aa7.15□□□□□ -1.26
PPME1-208ENST00000543525 COX6B2Q6YFQ2 88 aa7.15□□□□□ -1.27
PPME1-208ENST00000543525 Q5VSD8 79 aa7.12□□□□□ -1.27
PPME1-208ENST00000543525 HMCN2Q8NDA2 5059 aa7.12□□□□□ -1.27
PPME1-208ENST00000543525 KRTAP10-8P60410 259 aa7.11□□□□□ -1.27
PPME1-208ENST00000543525 A0A1B0GU33 70 aa7.09□□□□□ -1.27
PPME1-208ENST00000543525 PRAC1Q96KF2 57 aa7.09□□□□□ -1.27
PPME1-208ENST00000543525 FLG2Q5D862 2391 aaPredicted RBP7.08□□□□□ -1.28
PPME1-208ENST00000543525 H1FX-AS1Q4G0G2 97 aa7.07□□□□□ -1.28
PPME1-208ENST00000543525 H0YAA0 97 aa7.06□□□□□ -1.28
PPME1-208ENST00000543525 ADM2Q7Z4H4 148 aa7.06□□□□□ -1.28
PPME1-208ENST00000543525 RPL37P61927 97 aaKnown RBP7.04□□□□□ -1.28
PPME1-208ENST00000543525 XP32Q5T750 250 aa6.97□□□□□ -1.29
PPME1-208ENST00000543525 FAT3Q8TDW7 4589 aa6.96□□□□□ -1.3
PPME1-208ENST00000543525 TNXBP22105 4242 aa6.93□□□□□ -1.3
PPME1-208ENST00000543525 CSAG1Q6PB30 78 aa6.91□□□□□ -1.3
PPME1-208ENST00000543525 K7ERS5 55 aa6.91□□□□□ -1.3
PPME1-208ENST00000543525 S4R3F8 94 aa6.9□□□□□ -1.3
PPME1-208ENST00000543525 LINC01554Q52M75 96 aa6.89□□□□□ -1.31
PPME1-208ENST00000543525 LRP1Q07954 4544 aaKnown RBP6.87□□□□□ -1.31
PPME1-208ENST00000543525 MT1HL1P0DM35 61 aa6.86□□□□□ -1.31
PPME1-208ENST00000543525 KRTAP10-6P60371 365 aaPredicted RBP6.85□□□□□ -1.31
PPME1-208ENST00000543525 RNF213Q63HN8 5207 aa6.84□□□□□ -1.31
PPME1-208ENST00000543525 KRTAP25-1Q3LHN0 102 aa6.77□□□□□ -1.33
PPME1-208ENST00000543525 TPRXLQ17RH7 258 aa6.76□□□□□ -1.33
PPME1-208ENST00000543525 LRP2P98164 4655 aa6.75□□□□□ -1.33
PPME1-208ENST00000543525 H3BS24 57 aa6.75□□□□□ -1.33
PPME1-208ENST00000543525 KRTAP13-4Q3LI77 160 aa6.74□□□□□ -1.33
PPME1-208ENST00000543525 A0A0D9SG42 100 aa6.72□□□□□ -1.33
PPME1-208ENST00000543525 ROMO1P60602 79 aa6.71□□□□□ -1.34
PPME1-208ENST00000543525 P0C880 135 aa6.7□□□□□ -1.34
PPME1-208ENST00000543525 KRTAP9-2Q9BYQ4 174 aa6.66□□□□□ -1.34
PPME1-208ENST00000543525 KRTAP9-6A0A140TA67 174 aa6.62□□□□□ -1.35
PPME1-208ENST00000543525 CRIPTQ9P021 101 aa6.6□□□□□ -1.35
PPME1-208ENST00000543525 M0QZ58 72 aa6.57□□□□□ -1.36
PPME1-208ENST00000543525 KRTAP12-2P59991 146 aa6.54□□□□□ -1.36
PPME1-208ENST00000543525 SEC61BP60468 96 aaKnown RBP6.53□□□□□ -1.36
PPME1-208ENST00000543525 KRTAP12-1P59990 96 aa6.52□□□□□ -1.37
PPME1-208ENST00000543525 SPINT4Q6UDR6 99 aa6.51□□□□□ -1.37
PPME1-208ENST00000543525 FAT4Q6V0I7 4981 aa6.5□□□□□ -1.37
PPME1-208ENST00000543525 LPAP08519 4548 aa6.41□□□□□ -1.38
PPME1-208ENST00000543525 C10orf95Q9H7T3 257 aa6.38□□□□□ -1.39
PPME1-208ENST00000543525 R4GN34 69 aa6.38□□□□□ -1.39
PPME1-208ENST00000543525 MUC2Q02817 5179 aa6.35□□□□□ -1.39
PPME1-208ENST00000543525 KRTAP4-1Q9BYQ7 146 aa6.35□□□□□ -1.39
PPME1-208ENST00000543525 MUC17Q685J3 4493 aa6.26□□□□□ -1.41
PPME1-208ENST00000543525 KRTAP19-2Q3LHN2 52 aa6.24□□□□□ -1.41
PPME1-208ENST00000543525 CRCT1Q9UGL9 99 aa6.22□□□□□ -1.41
PPME1-208ENST00000543525 KRTAP15-1Q3LI76 137 aa6.14□□□□□ -1.43
PPME1-208ENST00000543525 FSIP2Q5CZC0 6907 aa6.14□□□□□ -1.43
PPME1-208ENST00000543525 CAMK2N1Q7Z7J9 78 aa6.07□□□□□ -1.44
PPME1-208ENST00000543525 PP632Q6XCG6 107 aa5.99□□□□□ -1.45
PPME1-208ENST00000543525 FLGP20930 4061 aaPredicted RBP5.98□□□□□ -1.45
PPME1-208ENST00000543525 NDUFAF8A1L188 74 aa5.95□□□□□ -1.46
PPME1-208ENST00000543525 PLAC4Q8WY50 150 aa5.92□□□□□ -1.46
PPME1-208ENST00000543525 KRTAP9-7A8MTY7 169 aa5.89□□□□□ -1.47
PPME1-208ENST00000543525 TNP1P09430 55 aa5.86□□□□□ -1.47
PPME1-208ENST00000543525 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.82□□□□□ -1.48
PPME1-208ENST00000543525 KRTAP23-1A1A580 65 aa5.81□□□□□ -1.48
PPME1-208ENST00000543525 SPRR2GQ9BYE4 73 aa5.8□□□□□ -1.48
PPME1-208ENST00000543525 M0R2T5 61 aa5.78□□□□□ -1.48
PPME1-208ENST00000543525 LOC100996750A0A140TA64 210 aa5.75□□□□□ -1.49
PPME1-208ENST00000543525 KRTAP4-6Q9BYQ5 205 aa5.75□□□□□ -1.49
PPME1-208ENST00000543525 MT1HP80294 61 aa5.73□□□□□ -1.49
PPME1-208ENST00000543525 KRTAP19-1Q8IUB9 90 aa5.73□□□□□ -1.49
PPME1-208ENST00000543525 KRTAP19-4Q3LI73 84 aa5.69□□□□□ -1.5
PPME1-208ENST00000543525 LUZP6Q538Z0 58 aa5.66□□□□□ -1.5
PPME1-208ENST00000543525 KRTAP10-10P60014 251 aa5.66□□□□□ -1.5
PPME1-208ENST00000543525 MT2AP02795 61 aa5.64□□□□□ -1.51
PPME1-208ENST00000543525 MT1FP04733 61 aa5.62□□□□□ -1.51
PPME1-208ENST00000543525 KRTAP9-8Q9BYQ0 159 aa5.59□□□□□ -1.51
PPME1-208ENST00000543525 SSPOA2VEC9 5147 aa5.58□□□□□ -1.52
PPME1-208ENST00000543525 KRTAP19-8Q3LI54 63 aa5.56□□□□□ -1.52
PPME1-208ENST00000543525 USH2AO75445 5202 aa5.54□□□□□ -1.52
PPME1-208ENST00000543525 SPRR5A0A1B0GTR4 108 aa5.52□□□□□ -1.53
PPME1-208ENST00000543525 FCGBPQ9Y6R7 5405 aaPredicted RBP5.52□□□□□ -1.53
PPME1-208ENST00000543525 LCE3AQ5TA76 89 aa5.5□□□□□ -1.53
PPME1-208ENST00000543525 KRTAP4-8Q9BYQ9 185 aa5.47□□□□□ -1.53
PPME1-208ENST00000543525 MT1BP07438 61 aa5.45□□□□□ -1.54
PPME1-208ENST00000543525 SYNE2Q8WXH0 6885 aaKnown RBP5.45□□□□□ -1.54
PPME1-208ENST00000543525 KRTAP4-12Q9BQ66 201 aa5.44□□□□□ -1.54
PPME1-208ENST00000543525 MACF1Q9UPN3 7388 aaKnown RBP5.41□□□□□ -1.54
PPME1-208ENST00000543525 KRTAP10-5P60370 271 aa5.41□□□□□ -1.54
PPME1-208ENST00000543525 MT1XP80297 61 aa5.4□□□□□ -1.54
PPME1-208ENST00000543525 KRTAP8-1Q8IUC2 63 aa5.39□□□□□ -1.55
PPME1-208ENST00000543525 KRTAP9-3Q9BYQ3 159 aa5.37□□□□□ -1.55
PPME1-208ENST00000543525 A0A0A0MQY5 61 aa5.36□□□□□ -1.55
PPME1-208ENST00000543525 KRTAP10-12P60413 245 aa5.32□□□□□ -1.56
PPME1-208ENST00000543525 KRTAP6-3Q3LI67 103 aa5.29□□□□□ -1.56
PPME1-208ENST00000543525 PRO2289Q9P1D8 64 aa5.28□□□□□ -1.56
PPME1-208ENST00000543525 KRTAP12-3P60328 96 aa5.26□□□□□ -1.57
PPME1-208ENST00000543525 LCE4AQ5TA78 99 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms