RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 KRTAP1-4P0C5Y4 121 aa6.21□□□□□ -1.42
CDH4-201ENST00000543233 DYNC1H1Q14204 4646 aaKnown RBP6.18□□□□□ -1.42
CDH4-201ENST00000543233 A0A0D9SG42 100 aa6.18□□□□□ -1.42
CDH4-201ENST00000543233 SEC61BP60468 96 aaKnown RBP6.16□□□□□ -1.42
CDH4-201ENST00000543233 EPPK1P58107 5090 aaKnown RBP6.14□□□□□ -1.43
CDH4-201ENST00000543233 COX6B2Q6YFQ2 88 aa6.12□□□□□ -1.43
CDH4-201ENST00000543233 C9orf92A6NGG3 77 aa6.1□□□□□ -1.43
CDH4-201ENST00000543233 RPL37P61927 97 aaKnown RBP6.1□□□□□ -1.43
CDH4-201ENST00000543233 KIAA1109Q2LD37 5005 aa6.06□□□□□ -1.44
CDH4-201ENST00000543233 APOBP04114 4563 aaKnown RBP6.04□□□□□ -1.44
CDH4-201ENST00000543233 LRP1Q07954 4544 aaKnown RBP6□□□□□ -1.45
CDH4-201ENST00000543233 A0A1B0GVY2 172 aa5.99□□□□□ -1.45
CDH4-201ENST00000543233 MYCBP2O75592 4640 aa5.96□□□□□ -1.45
CDH4-201ENST00000543233 KRTAP10-4P60372 401 aaPredicted RBP5.92□□□□□ -1.46
CDH4-201ENST00000543233 HSPG2P98160 4391 aa5.9□□□□□ -1.47
CDH4-201ENST00000543233 KRTAP13-4Q3LI77 160 aa5.89□□□□□ -1.47
CDH4-201ENST00000543233 KRTAP17-1Q9BYP8 105 aa5.89□□□□□ -1.47
CDH4-201ENST00000543233 RYR1P21817 5038 aa5.89□□□□□ -1.47
CDH4-201ENST00000543233 KRTAP3-1Q9BYR8 98 aa5.88□□□□□ -1.47
CDH4-201ENST00000543233 S4R3F8 94 aa5.86□□□□□ -1.47
CDH4-201ENST00000543233 PKHD1L1Q86WI1 4243 aa5.86□□□□□ -1.47
CDH4-201ENST00000543233 Q5VSD8 79 aa5.85□□□□□ -1.47
CDH4-201ENST00000543233 RPS29P62273 56 aaKnown RBP5.84□□□□□ -1.47
CDH4-201ENST00000543233 KRTAP4-5Q9BYR2 181 aa5.8□□□□□ -1.48
CDH4-201ENST00000543233 BIRC6Q9NR09 4857 aa5.8□□□□□ -1.48
CDH4-201ENST00000543233 KRTAP12-2P59991 146 aa5.79□□□□□ -1.48
CDH4-201ENST00000543233 PLAC4Q8WY50 150 aa5.79□□□□□ -1.48
CDH4-201ENST00000543233 FAT3Q8TDW7 4589 aa5.78□□□□□ -1.48
CDH4-201ENST00000543233 ABCA13Q86UQ4 5058 aa5.77□□□□□ -1.49
CDH4-201ENST00000543233 KRTAP10-6P60371 365 aaPredicted RBP5.76□□□□□ -1.49
CDH4-201ENST00000543233 TNXBP22105 4242 aa5.75□□□□□ -1.49
CDH4-201ENST00000543233 HERC2O95714 4834 aa5.74□□□□□ -1.49
CDH4-201ENST00000543233 KRTAP10-8P60410 259 aa5.71□□□□□ -1.5
CDH4-201ENST00000543233 XP32Q5T750 250 aa5.7□□□□□ -1.5
CDH4-201ENST00000543233 PCLOQ9Y6V0 5065 aa5.67□□□□□ -1.5
CDH4-201ENST00000543233 KRTAP3-2Q9BYR7 98 aa5.65□□□□□ -1.5
CDH4-201ENST00000543233 KRTAP12-1P59990 96 aa5.64□□□□□ -1.51
CDH4-201ENST00000543233 LRP2P98164 4655 aa5.63□□□□□ -1.51
CDH4-201ENST00000543233 LPAP08519 4548 aa5.62□□□□□ -1.51
CDH4-201ENST00000543233 HERC1Q15751 4861 aa5.6□□□□□ -1.51
CDH4-201ENST00000543233 MT1HL1P0DM35 61 aa5.59□□□□□ -1.51
CDH4-201ENST00000543233 CAMK2N1Q7Z7J9 78 aa5.57□□□□□ -1.52
CDH4-201ENST00000543233 KRTAP3-3Q9BYR6 98 aa5.54□□□□□ -1.52
CDH4-201ENST00000543233 MUC2Q02817 5179 aa5.37□□□□□ -1.55
CDH4-201ENST00000543233 M0QZ58 72 aa5.37□□□□□ -1.55
CDH4-201ENST00000543233 PRO2289Q9P1D8 64 aa5.37□□□□□ -1.55
CDH4-201ENST00000543233 UBR4Q5T4S7 5183 aa5.3□□□□□ -1.56
CDH4-201ENST00000543233 R4GN34 69 aa5.28□□□□□ -1.56
CDH4-201ENST00000543233 RNF213Q63HN8 5207 aa5.28□□□□□ -1.56
CDH4-201ENST00000543233 HMCN2Q8NDA2 5059 aa5.27□□□□□ -1.57
CDH4-201ENST00000543233 KRTAP4-1Q9BYQ7 146 aa5.25□□□□□ -1.57
CDH4-201ENST00000543233 PP632Q6XCG6 107 aa5.23□□□□□ -1.57
CDH4-201ENST00000543233 MUC17Q685J3 4493 aa5.17□□□□□ -1.58
CDH4-201ENST00000543233 KRTAP23-1A1A580 65 aa5.17□□□□□ -1.58
CDH4-201ENST00000543233 LORP23490 312 aaPredicted RBP5.14□□□□□ -1.59
CDH4-201ENST00000543233 FAT4Q6V0I7 4981 aa5.11□□□□□ -1.59
CDH4-201ENST00000543233 INE1O15225 51 aa5.08□□□□□ -1.6
CDH4-201ENST00000543233 SPRR5A0A1B0GTR4 108 aa5□□□□□ -1.61
CDH4-201ENST00000543233 KRTAP19-2Q3LHN2 52 aa4.99□□□□□ -1.61
CDH4-201ENST00000543233 FLGP20930 4061 aaPredicted RBP4.97□□□□□ -1.61
CDH4-201ENST00000543233 TNP1P09430 55 aa4.94□□□□□ -1.62
CDH4-201ENST00000543233 M0R2T5 61 aa4.91□□□□□ -1.62
CDH4-201ENST00000543233 LCE2CQ5TA81 110 aa4.79□□□□□ -1.64
CDH4-201ENST00000543233 KRTAP10-10P60014 251 aa4.7□□□□□ -1.66
CDH4-201ENST00000543233 MT1HP80294 61 aa4.7□□□□□ -1.66
CDH4-201ENST00000543233 FSIP2Q5CZC0 6907 aa4.65□□□□□ -1.67
CDH4-201ENST00000543233 KRTAP19-1Q8IUB9 90 aa4.63□□□□□ -1.67
CDH4-201ENST00000543233 MT1FP04733 61 aa4.63□□□□□ -1.67
CDH4-201ENST00000543233 KRTAP9-6A0A140TA67 174 aa4.61□□□□□ -1.67
CDH4-201ENST00000543233 MT2AP02795 61 aa4.61□□□□□ -1.67
CDH4-201ENST00000543233 USH2AO75445 5202 aa4.6□□□□□ -1.67
CDH4-201ENST00000543233 LCE3AQ5TA76 89 aa4.58□□□□□ -1.68
CDH4-201ENST00000543233 SPRR2GQ9BYE4 73 aa4.57□□□□□ -1.68
CDH4-201ENST00000543233 LCE2DQ5TA82 110 aaPredicted RBP4.55□□□□□ -1.68
CDH4-201ENST00000543233 KRTAP9-8Q9BYQ0 159 aa4.55□□□□□ -1.68
CDH4-201ENST00000543233 LCE2AQ5TA79 106 aaPredicted RBP4.51□□□□□ -1.69
CDH4-201ENST00000543233 KMT2DO14686 5537 aa4.5□□□□□ -1.69
CDH4-201ENST00000543233 MT1BP07438 61 aa4.41□□□□□ -1.7
CDH4-201ENST00000543233 KRTAP19-8Q3LI54 63 aa4.36□□□□□ -1.71
CDH4-201ENST00000543233 MT1XP80297 61 aa4.35□□□□□ -1.71
CDH4-201ENST00000543233 KRTAP10-5P60370 271 aa4.35□□□□□ -1.71
CDH4-201ENST00000543233 KRTAP9-3Q9BYQ3 159 aa4.35□□□□□ -1.71
CDH4-201ENST00000543233 KRTAP12-3P60328 96 aa4.3□□□□□ -1.72
CDH4-201ENST00000543233 KRTAP10-7P60409 375 aaPredicted RBP4.3□□□□□ -1.72
CDH4-201ENST00000543233 OBSCNQ5VST9 7968 aa4.29□□□□□ -1.72
CDH4-201ENST00000543233 KRTAP8-1Q8IUC2 63 aa4.28□□□□□ -1.72
CDH4-201ENST00000543233 KRTAP10-12P60413 245 aa4.28□□□□□ -1.72
CDH4-201ENST00000543233 KRTAP9-2Q9BYQ4 174 aa4.27□□□□□ -1.73
CDH4-201ENST00000543233 LCE2BO14633 110 aa4.26□□□□□ -1.73
CDH4-201ENST00000543233 SSPOA2VEC9 5147 aa4.23□□□□□ -1.73
CDH4-201ENST00000543233 DSTQ03001 7570 aaKnown RBP4.21□□□□□ -1.74
CDH4-201ENST00000543233 KRTAP4-8A0A0G2JLE6 195 aa4.14□□□□□ -1.75
CDH4-201ENST00000543233 KRTAP4-8Q9BYQ9 185 aa4.14□□□□□ -1.75
CDH4-201ENST00000543233 KRTAP19-5Q3LI72 72 aa4.09□□□□□ -1.75
CDH4-201ENST00000543233 FCGBPQ9Y6R7 5405 aaPredicted RBP4.05□□□□□ -1.76
CDH4-201ENST00000543233 CRCT1Q9UGL9 99 aa4.04□□□□□ -1.76
CDH4-201ENST00000543233 LCE3CQ5T5A8 94 aa4.03□□□□□ -1.76
CDH4-201ENST00000543233 SYNE1Q8NF91 8797 aaKnown RBP4.02□□□□□ -1.77
CDH4-201ENST00000543233 MACF1Q9UPN3 7388 aaKnown RBP3.96□□□□□ -1.78
CDH4-201ENST00000543233 KRTAP9-6A8MVA2 160 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms