RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 TP53AIP1Q9HCN2 124 aa4.87□□□□□ -1.63
TNFRSF1A-214ENST00000543048 TRAV7A0A075B6U4 112 aa4.86□□□□□ -1.63
TNFRSF1A-214ENST00000543048 ANAPC13Q9BS18 74 aa4.86□□□□□ -1.63
TNFRSF1A-214ENST00000543048 UQCRQO14949 82 aa4.85□□□□□ -1.63
TNFRSF1A-214ENST00000543048 SERP2Q8N6R1 65 aa4.85□□□□□ -1.63
TNFRSF1A-214ENST00000543048 KRTAP9-8Q9BYQ0 159 aa4.84□□□□□ -1.63
TNFRSF1A-214ENST00000543048 FSIP2Q5CZC0 6907 aa4.83□□□□□ -1.64
TNFRSF1A-214ENST00000543048 TRAV22A0A0B4J277 110 aa4.82□□□□□ -1.64
TNFRSF1A-214ENST00000543048 H0Y9P7 68 aa4.8□□□□□ -1.64
TNFRSF1A-214ENST00000543048 COX7CP15954 63 aa4.8□□□□□ -1.64
TNFRSF1A-214ENST00000543048 C5orf47Q569G3 176 aa4.8□□□□□ -1.64
TNFRSF1A-214ENST00000543048 MP68P56378 58 aa4.79□□□□□ -1.64
TNFRSF1A-214ENST00000543048 Q5W150 140 aa4.78□□□□□ -1.64
TNFRSF1A-214ENST00000543048 H3BPC8 53 aa4.77□□□□□ -1.65
TNFRSF1A-214ENST00000543048 MT2AP02795 61 aa4.76□□□□□ -1.65
TNFRSF1A-214ENST00000543048 LOC101927531A0A1B0GV80 90 aa4.75□□□□□ -1.65
TNFRSF1A-214ENST00000543048 PCP4P48539 62 aa4.75□□□□□ -1.65
TNFRSF1A-214ENST00000543048 C20orf197Q8N268 126 aa4.75□□□□□ -1.65
TNFRSF1A-214ENST00000543048 LINC00208Q96KT6 92 aa4.75□□□□□ -1.65
TNFRSF1A-214ENST00000543048 C1orf64Q8NEQ6 169 aa4.74□□□□□ -1.65
TNFRSF1A-214ENST00000543048 CCDC179H3BU77 68 aa4.73□□□□□ -1.65
TNFRSF1A-214ENST00000543048 KRTAP10-10P60014 251 aa4.73□□□□□ -1.65
TNFRSF1A-214ENST00000543048 KLKP1Q107X0 134 aa4.73□□□□□ -1.65
TNFRSF1A-214ENST00000543048 IGKV2D-30A0A075B6S6 120 aa4.72□□□□□ -1.65
TNFRSF1A-214ENST00000543048 IGKV2-30P06310 120 aa4.72□□□□□ -1.65
TNFRSF1A-214ENST00000543048 C7orf65Q6ZTY9 151 aa4.72□□□□□ -1.65
TNFRSF1A-214ENST00000543048 SNURFQ9Y675 71 aa4.72□□□□□ -1.65
TNFRSF1A-214ENST00000543048 MT1FP04733 61 aa4.71□□□□□ -1.66
TNFRSF1A-214ENST00000543048 H1FX-AS1Q4G0G2 97 aa4.71□□□□□ -1.66
TNFRSF1A-214ENST00000543048 USH2AO75445 5202 aa4.71□□□□□ -1.66
TNFRSF1A-214ENST00000543048 CYP4F30PQ9H0H9 118 aa4.69□□□□□ -1.66
TNFRSF1A-214ENST00000543048 NDUFC1O43677 76 aa4.68□□□□□ -1.66
TNFRSF1A-214ENST00000543048 CYSTM1Q9H1C7 97 aa4.67□□□□□ -1.66
TNFRSF1A-214ENST00000543048 SSPOA2VEC9 5147 aa4.65□□□□□ -1.66
TNFRSF1A-214ENST00000543048 H7BZZ5 65 aa4.65□□□□□ -1.67
TNFRSF1A-214ENST00000543048 SVIPQ8NHG7 77 aa4.64□□□□□ -1.67
TNFRSF1A-214ENST00000543048 C4orf26Q17RF5 130 aa4.63□□□□□ -1.67
TNFRSF1A-214ENST00000543048 SPANXA2-OT1Q8N9U9 137 aa4.61□□□□□ -1.67
TNFRSF1A-214ENST00000543048 TMEM258P61165 79 aa4.6□□□□□ -1.67
TNFRSF1A-214ENST00000543048 ATP5EP56381 51 aaPredicted RBP4.58□□□□□ -1.68
TNFRSF1A-214ENST00000543048 DMAC1Q96GE9 116 aa4.55□□□□□ -1.68
TNFRSF1A-214ENST00000543048 FCGBPQ9Y6R7 5405 aaPredicted RBP4.54□□□□□ -1.68
TNFRSF1A-214ENST00000543048 A8MUN3 132 aa4.54□□□□□ -1.68
TNFRSF1A-214ENST00000543048 LCE1AQ5T7P2 110 aa4.53□□□□□ -1.68
TNFRSF1A-214ENST00000543048 S4R3F8 94 aa4.53□□□□□ -1.68
TNFRSF1A-214ENST00000543048 CSAG1Q6PB30 78 aa4.52□□□□□ -1.69
TNFRSF1A-214ENST00000543048 ACYP2P14621 99 aa4.49□□□□□ -1.69
TNFRSF1A-214ENST00000543048 KRTAP19-6Q3LI70 58 aa4.49□□□□□ -1.69
TNFRSF1A-214ENST00000543048 LCA10Q71F78 164 aa4.49□□□□□ -1.69
TNFRSF1A-214ENST00000543048 COA5Q86WW8 74 aa4.46□□□□□ -1.7
TNFRSF1A-214ENST00000543048 CHKB-CPT1BH3BT56 60 aa4.44□□□□□ -1.7
TNFRSF1A-214ENST00000543048 SERP1Q9Y6X1 66 aa4.44□□□□□ -1.7
TNFRSF1A-214ENST00000543048 RPS28P62857 69 aaKnown RBP4.38□□□□□ -1.71
TNFRSF1A-214ENST00000543048 SPTSSBQ8NFR3 76 aa4.38□□□□□ -1.71
TNFRSF1A-214ENST00000543048 SPRR2GQ9BYE4 73 aa4.38□□□□□ -1.71
TNFRSF1A-214ENST00000543048 Q5VV11 94 aa4.36□□□□□ -1.71
TNFRSF1A-214ENST00000543048 KRTAP19-8Q3LI54 63 aa4.35□□□□□ -1.71
TNFRSF1A-214ENST00000543048 CRIPTQ9P021 101 aa4.35□□□□□ -1.71
TNFRSF1A-214ENST00000543048 MT1BP07438 61 aa4.33□□□□□ -1.72
TNFRSF1A-214ENST00000543048 MACF1Q9UPN3 7388 aaKnown RBP4.32□□□□□ -1.72
TNFRSF1A-214ENST00000543048 SMIM26A0A096LP01 95 aa4.31□□□□□ -1.72
TNFRSF1A-214ENST00000543048 H0YAA0 97 aa4.31□□□□□ -1.72
TNFRSF1A-214ENST00000543048 A6NN06 94 aa4.3□□□□□ -1.72
TNFRSF1A-214ENST00000543048 SYNE2Q8WXH0 6885 aaKnown RBP4.28□□□□□ -1.72
TNFRSF1A-214ENST00000543048 ADM2Q7Z4H4 148 aa4.27□□□□□ -1.73
TNFRSF1A-214ENST00000543048 KRTAP6-3Q3LI67 103 aa4.26□□□□□ -1.73
TNFRSF1A-214ENST00000543048 V9GYY9 64 aa4.26□□□□□ -1.73
TNFRSF1A-214ENST00000543048 KRTAP10-5P60370 271 aa4.25□□□□□ -1.73
TNFRSF1A-214ENST00000543048 LINC01558Q9Y6Z2 57 aa4.25□□□□□ -1.73
TNFRSF1A-214ENST00000543048 A0A0A0MQY5 61 aa4.24□□□□□ -1.73
TNFRSF1A-214ENST00000543048 SEC61GP60059 68 aa4.24□□□□□ -1.73
TNFRSF1A-214ENST00000543048 Q1T7F1 81 aa4.24□□□□□ -1.73
TNFRSF1A-214ENST00000543048 KRTAP2-2Q9BYT5 123 aa4.24□□□□□ -1.73
TNFRSF1A-214ENST00000543048 A0A1B0GU69 56 aa4.22□□□□□ -1.73
TNFRSF1A-214ENST00000543048 PRR15LQ9BU68 103 aa4.21□□□□□ -1.74
TNFRSF1A-214ENST00000543048 PSPHP1O15172 72 aa4.16□□□□□ -1.74
TNFRSF1A-214ENST00000543048 P0C880 135 aa4.16□□□□□ -1.74
TNFRSF1A-214ENST00000543048 R4GN34 69 aa4.16□□□□□ -1.74
TNFRSF1A-214ENST00000543048 PLAC4Q8WY50 150 aa4.15□□□□□ -1.75
TNFRSF1A-214ENST00000543048 M0QZ58 72 aa4.12□□□□□ -1.75
TNFRSF1A-214ENST00000543048 A0A1B0GU33 70 aa4.11□□□□□ -1.75
TNFRSF1A-214ENST00000543048 PRO2289Q9P1D8 64 aa4.11□□□□□ -1.75
TNFRSF1A-214ENST00000543048 MUC12Q9UKN1 5478 aa4.07□□□□□ -1.76
TNFRSF1A-214ENST00000543048 UQCR11O14957 56 aa4.07□□□□□ -1.76
TNFRSF1A-214ENST00000543048 MT3P25713 68 aa4.07□□□□□ -1.76
TNFRSF1A-214ENST00000543048 MT1XP80297 61 aa4.07□□□□□ -1.76
TNFRSF1A-214ENST00000543048 A6NED7 52 aa4.06□□□□□ -1.76
TNFRSF1A-214ENST00000543048 KRTAP5-9P26371 169 aa4.06□□□□□ -1.76
TNFRSF1A-214ENST00000543048 LINC01554Q52M75 96 aa4.06□□□□□ -1.76
TNFRSF1A-214ENST00000543048 KRTAP10-7P60409 375 aaPredicted RBP4.04□□□□□ -1.76
TNFRSF1A-214ENST00000543048 KRTAP13-4Q3LI77 160 aa4.04□□□□□ -1.76
TNFRSF1A-214ENST00000543048 SPATA8Q6RVD6 105 aa4.03□□□□□ -1.76
TNFRSF1A-214ENST00000543048 NEBP20929 6669 aa4.02□□□□□ -1.77
TNFRSF1A-214ENST00000543048 KMT2DO14686 5537 aa4.01□□□□□ -1.77
TNFRSF1A-214ENST00000543048 MIR22HGQ0VDD5 57 aa4.01□□□□□ -1.77
TNFRSF1A-214ENST00000543048 KRTAP12-2P59991 146 aa3.99□□□□□ -1.77
TNFRSF1A-214ENST00000543048 CDC42SE1Q9NRR8 79 aa3.97□□□□□ -1.77
TNFRSF1A-214ENST00000543048 MDN1Q9NU22 5596 aa3.97□□□□□ -1.77
TNFRSF1A-214ENST00000543048 A0A0D9SG42 100 aa3.96□□□□□ -1.78
TNFRSF1A-214ENST00000543048 A8MU10 97 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms