RNA–Protein interactions for RNA: ENST00000542700.6

CHMP4A-209, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3

Gene CHMP4A, Length 847 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-209ENST00000542700 SERP2Q8N6R1 65 aa3.83□□□□□ -1.8
CHMP4A-209ENST00000542700 OCR1Q9BZK8 76 aa3.83□□□□□ -1.8
CHMP4A-209ENST00000542700 A6NN06 94 aa3.82□□□□□ -1.8
CHMP4A-209ENST00000542700 H0Y9P7 68 aa3.82□□□□□ -1.8
CHMP4A-209ENST00000542700 COX7CP15954 63 aa3.82□□□□□ -1.8
CHMP4A-209ENST00000542700 ATP11AUNQ6ZP68 121 aa3.82□□□□□ -1.8
CHMP4A-209ENST00000542700 MP68P56378 58 aa3.81□□□□□ -1.8
CHMP4A-209ENST00000542700 Q5W150 140 aa3.81□□□□□ -1.8
CHMP4A-209ENST00000542700 ZCCHC13Q8WW36 166 aaKnown RBP3.81□□□□□ -1.8
CHMP4A-209ENST00000542700 Q75L30 129 aa3.8□□□□□ -1.8
CHMP4A-209ENST00000542700 LINC00208Q96KT6 92 aa3.8□□□□□ -1.8
CHMP4A-209ENST00000542700 TRAV22A0A0B4J277 110 aa3.79□□□□□ -1.8
CHMP4A-209ENST00000542700 PCP4P48539 62 aa3.79□□□□□ -1.8
CHMP4A-209ENST00000542700 C20orf197Q8N268 126 aa3.78□□□□□ -1.8
CHMP4A-209ENST00000542700 C1orf64Q8NEQ6 169 aa3.78□□□□□ -1.8
CHMP4A-209ENST00000542700 H3BPC8 53 aa3.77□□□□□ -1.81
CHMP4A-209ENST00000542700 CCDC179H3BU77 68 aa3.77□□□□□ -1.81
CHMP4A-209ENST00000542700 SNURFQ9Y675 71 aa3.77□□□□□ -1.81
CHMP4A-209ENST00000542700 IGKV2D-30A0A075B6S6 120 aa3.76□□□□□ -1.81
CHMP4A-209ENST00000542700 FAM236DA0A1B0GTK5 79 aa3.76□□□□□ -1.81
CHMP4A-209ENST00000542700 IGKV2-30P06310 120 aa3.76□□□□□ -1.81
CHMP4A-209ENST00000542700 FAM236CP0DP71 79 aa3.76□□□□□ -1.81
CHMP4A-209ENST00000542700 LOC101927531A0A1B0GV80 90 aa3.75□□□□□ -1.81
CHMP4A-209ENST00000542700 SPRR2DP22532 72 aa3.75□□□□□ -1.81
CHMP4A-209ENST00000542700 SPRR2FQ96RM1 72 aa3.75□□□□□ -1.81
CHMP4A-209ENST00000542700 CYP4F30PQ9H0H9 118 aa3.73□□□□□ -1.81
CHMP4A-209ENST00000542700 SPINK7P58062 85 aa3.72□□□□□ -1.81
CHMP4A-209ENST00000542700 C7orf65Q6ZTY9 151 aa3.72□□□□□ -1.81
CHMP4A-209ENST00000542700 H3BS24 57 aa3.71□□□□□ -1.82
CHMP4A-209ENST00000542700 KLKP1Q107X0 134 aa3.71□□□□□ -1.82
CHMP4A-209ENST00000542700 SVIPQ8NHG7 77 aa3.71□□□□□ -1.82
CHMP4A-209ENST00000542700 NDUFC1O43677 76 aa3.69□□□□□ -1.82
CHMP4A-209ENST00000542700 LCE1AQ5T7P2 110 aa3.69□□□□□ -1.82
CHMP4A-209ENST00000542700 LCE3BQ5TA77 95 aa3.69□□□□□ -1.82
CHMP4A-209ENST00000542700 DSTQ03001 7570 aaKnown RBP3.68□□□□□ -1.82
CHMP4A-209ENST00000542700 HRES1P13985 223 aa3.67□□□□□ -1.82
CHMP4A-209ENST00000542700 CYSTM1Q9H1C7 97 aa3.67□□□□□ -1.82
CHMP4A-209ENST00000542700 C4orf26Q17RF5 130 aa3.66□□□□□ -1.82
CHMP4A-209ENST00000542700 H7BZZ5 65 aa3.65□□□□□ -1.83
CHMP4A-209ENST00000542700 KRTAP4-9Q9BYQ8 210 aa3.65□□□□□ -1.83
CHMP4A-209ENST00000542700 RBM12B-AS1Q9P1G2 102 aa3.64□□□□□ -1.83
CHMP4A-209ENST00000542700 AHNAK2Q8IVF2 5795 aa3.62□□□□□ -1.83
CHMP4A-209ENST00000542700 KRTAP10-5P60370 271 aa3.62□□□□□ -1.83
CHMP4A-209ENST00000542700 SPANXA2-OT1Q8N9U9 137 aa3.62□□□□□ -1.83
CHMP4A-209ENST00000542700 TMEM258P61165 79 aa3.61□□□□□ -1.83
CHMP4A-209ENST00000542700 ACYP2P14621 99 aa3.6□□□□□ -1.83
CHMP4A-209ENST00000542700 ATP5EP56381 51 aaPredicted RBP3.58□□□□□ -1.84
CHMP4A-209ENST00000542700 MT1BP07438 61 aa3.57□□□□□ -1.84
CHMP4A-209ENST00000542700 A8MUN3 132 aa3.56□□□□□ -1.84
CHMP4A-209ENST00000542700 CHKB-CPT1BH3BT56 60 aa3.56□□□□□ -1.84
CHMP4A-209ENST00000542700 H1FX-AS1Q4G0G2 97 aa3.56□□□□□ -1.84
CHMP4A-209ENST00000542700 MPLKIPQ8TAP9 179 aa3.56□□□□□ -1.84
CHMP4A-209ENST00000542700 DMAC1Q96GE9 116 aa3.56□□□□□ -1.84
CHMP4A-209ENST00000542700 KRTAP3-1Q9BYR8 98 aa3.56□□□□□ -1.84
CHMP4A-209ENST00000542700 KRTAP5-10Q6L8G5 202 aa3.55□□□□□ -1.84
CHMP4A-209ENST00000542700 LOC100996750A0A140TA64 210 aa3.54□□□□□ -1.84
CHMP4A-209ENST00000542700 SPRR5A0A1B0GTR4 108 aa3.54□□□□□ -1.84
CHMP4A-209ENST00000542700 COA5Q86WW8 74 aa3.54□□□□□ -1.84
CHMP4A-209ENST00000542700 KRTAP4-6Q9BYQ5 205 aa3.54□□□□□ -1.84
CHMP4A-209ENST00000542700 SERP1Q9Y6X1 66 aa3.53□□□□□ -1.84
CHMP4A-209ENST00000542700 Q5VV11 94 aa3.52□□□□□ -1.85
CHMP4A-209ENST00000542700 S4R3F8 94 aa3.52□□□□□ -1.85
CHMP4A-209ENST00000542700 HMCN1Q96RW7 5635 aa3.51□□□□□ -1.85
CHMP4A-209ENST00000542700 KRTAP5-7Q6L8G8 165 aa3.5□□□□□ -1.85
CHMP4A-209ENST00000542700 KRTAP8-1Q8IUC2 63 aa3.5□□□□□ -1.85
CHMP4A-209ENST00000542700 SPTSSBQ8NFR3 76 aa3.5□□□□□ -1.85
CHMP4A-209ENST00000542700 LCA10Q71F78 164 aa3.48□□□□□ -1.85
CHMP4A-209ENST00000542700 RPS28P62857 69 aaKnown RBP3.47□□□□□ -1.85
CHMP4A-209ENST00000542700 LCE1DQ5T752 114 aa3.46□□□□□ -1.86
CHMP4A-209ENST00000542700 CSAG1Q6PB30 78 aa3.46□□□□□ -1.86
CHMP4A-209ENST00000542700 SMIM26A0A096LP01 95 aa3.44□□□□□ -1.86
CHMP4A-209ENST00000542700 KRTAP19-8Q3LI54 63 aa3.42□□□□□ -1.86
CHMP4A-209ENST00000542700 SEC61GP60059 68 aa3.4□□□□□ -1.87
CHMP4A-209ENST00000542700 V9GYY9 64 aa3.39□□□□□ -1.87
CHMP4A-209ENST00000542700 A0A1B0GU69 56 aa3.38□□□□□ -1.87
CHMP4A-209ENST00000542700 LINC01558Q9Y6Z2 57 aa3.38□□□□□ -1.87
CHMP4A-209ENST00000542700 MT4P47944 62 aa3.36□□□□□ -1.87
CHMP4A-209ENST00000542700 ADM2Q7Z4H4 148 aa3.36□□□□□ -1.87
CHMP4A-209ENST00000542700 PRR15LQ9BU68 103 aa3.36□□□□□ -1.87
CHMP4A-209ENST00000542700 Q1T7F1 81 aa3.35□□□□□ -1.87
CHMP4A-209ENST00000542700 PSPHP1O15172 72 aa3.34□□□□□ -1.87
CHMP4A-209ENST00000542700 SPRR2GQ9BYE4 73 aa3.32□□□□□ -1.88
CHMP4A-209ENST00000542700 H0YAA0 97 aa3.3□□□□□ -1.88
CHMP4A-209ENST00000542700 P0C880 135 aa3.3□□□□□ -1.88
CHMP4A-209ENST00000542700 KRTAP5-3Q6L8H2 238 aa3.3□□□□□ -1.88
CHMP4A-209ENST00000542700 A0A1B0GU33 70 aa3.29□□□□□ -1.88
CHMP4A-209ENST00000542700 KRTAP19-4Q3LI73 84 aa3.29□□□□□ -1.88
CHMP4A-209ENST00000542700 KRTAP4-8Q9BYQ9 185 aa3.29□□□□□ -1.88
CHMP4A-209ENST00000542700 KRTAP4-8A0A0G2JLE6 195 aa3.28□□□□□ -1.88
CHMP4A-209ENST00000542700 UQCR11O14957 56 aa3.25□□□□□ -1.89
CHMP4A-209ENST00000542700 A6NED7 52 aa3.24□□□□□ -1.89
CHMP4A-209ENST00000542700 M0QZ58 72 aa3.24□□□□□ -1.89
CHMP4A-209ENST00000542700 KRTAP4-12Q9BQ66 201 aa3.24□□□□□ -1.89
CHMP4A-209ENST00000542700 R4GN34 69 aa3.24□□□□□ -1.89
CHMP4A-209ENST00000542700 SPATA8Q6RVD6 105 aa3.23□□□□□ -1.89
CHMP4A-209ENST00000542700 LCE4AQ5TA78 99 aa3.22□□□□□ -1.89
CHMP4A-209ENST00000542700 CRIPTQ9P021 101 aa3.22□□□□□ -1.89
CHMP4A-209ENST00000542700 MIR22HGQ0VDD5 57 aa3.21□□□□□ -1.9
CHMP4A-209ENST00000542700 KRTAP12-2P59991 146 aa3.2□□□□□ -1.9
CHMP4A-209ENST00000542700 LINC01554Q52M75 96 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms