RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 NDUFC1O43677 76 aa4.93□□□□□ -1.62
LDHA-220ENST00000542179 SNURFQ9Y675 71 aa4.93□□□□□ -1.62
LDHA-220ENST00000542179 ATP11AUNQ6ZP68 121 aa4.92□□□□□ -1.62
LDHA-220ENST00000542179 IGKV2-30P06310 120 aa4.91□□□□□ -1.62
LDHA-220ENST00000542179 CYP4F30PQ9H0H9 118 aa4.9□□□□□ -1.63
LDHA-220ENST00000542179 CYSTM1Q9H1C7 97 aa4.9□□□□□ -1.63
LDHA-220ENST00000542179 FSIP2Q5CZC0 6907 aa4.89□□□□□ -1.63
LDHA-220ENST00000542179 H7BZZ5 65 aa4.89□□□□□ -1.63
LDHA-220ENST00000542179 CRCT1Q9UGL9 99 aa4.87□□□□□ -1.63
LDHA-220ENST00000542179 C7orf65Q6ZTY9 151 aa4.86□□□□□ -1.63
LDHA-220ENST00000542179 IGKV2D-30A0A075B6S6 120 aa4.85□□□□□ -1.63
LDHA-220ENST00000542179 LRP2P98164 4655 aa4.85□□□□□ -1.63
LDHA-220ENST00000542179 SPINK7P58062 85 aa4.84□□□□□ -1.63
LDHA-220ENST00000542179 SEC61BP60468 96 aaKnown RBP4.84□□□□□ -1.63
LDHA-220ENST00000542179 TMEM258P61165 79 aa4.84□□□□□ -1.63
LDHA-220ENST00000542179 PCOTHQ58A44 107 aa4.84□□□□□ -1.63
LDHA-220ENST00000542179 SPANXA2-OT1Q8N9U9 137 aa4.84□□□□□ -1.63
LDHA-220ENST00000542179 LPAP08519 4548 aa4.83□□□□□ -1.64
LDHA-220ENST00000542179 HRES1P13985 223 aa4.8□□□□□ -1.64
LDHA-220ENST00000542179 ATP5EP56381 51 aaPredicted RBP4.8□□□□□ -1.64
LDHA-220ENST00000542179 FAM236DA0A1B0GTK5 79 aa4.78□□□□□ -1.64
LDHA-220ENST00000542179 FAM236CP0DP71 79 aa4.78□□□□□ -1.64
LDHA-220ENST00000542179 RPS28P62857 69 aaKnown RBP4.75□□□□□ -1.65
LDHA-220ENST00000542179 MUC17Q685J3 4493 aa4.74□□□□□ -1.65
LDHA-220ENST00000542179 C4orf26Q17RF5 130 aa4.74□□□□□ -1.65
LDHA-220ENST00000542179 DMAC1Q96GE9 116 aa4.74□□□□□ -1.65
LDHA-220ENST00000542179 A8MUN3 132 aa4.73□□□□□ -1.65
LDHA-220ENST00000542179 COX6B2Q6YFQ2 88 aa4.73□□□□□ -1.65
LDHA-220ENST00000542179 LCE1AQ5T7P2 110 aa4.72□□□□□ -1.65
LDHA-220ENST00000542179 MPLKIPQ8TAP9 179 aa4.72□□□□□ -1.65
LDHA-220ENST00000542179 KRTAP4-1Q9BYQ7 146 aa4.71□□□□□ -1.66
LDHA-220ENST00000542179 ACYP2P14621 99 aa4.7□□□□□ -1.66
LDHA-220ENST00000542179 SERP1Q9Y6X1 66 aa4.69□□□□□ -1.66
LDHA-220ENST00000542179 RBM12B-AS1Q9P1G2 102 aa4.68□□□□□ -1.66
LDHA-220ENST00000542179 COA5Q86WW8 74 aa4.64□□□□□ -1.67
LDHA-220ENST00000542179 H1FX-AS1Q4G0G2 97 aa4.63□□□□□ -1.67
LDHA-220ENST00000542179 PRO0628Q9UI54 55 aa4.62□□□□□ -1.67
LDHA-220ENST00000542179 KRTAP19-2Q3LHN2 52 aa4.61□□□□□ -1.67
LDHA-220ENST00000542179 SEC61GP60059 68 aa4.6□□□□□ -1.67
LDHA-220ENST00000542179 CHKB-CPT1BH3BT56 60 aa4.59□□□□□ -1.67
LDHA-220ENST00000542179 V9GYY9 64 aa4.59□□□□□ -1.67
LDHA-220ENST00000542179 SMIM26A0A096LP01 95 aa4.57□□□□□ -1.68
LDHA-220ENST00000542179 SPTSSBQ8NFR3 76 aa4.55□□□□□ -1.68
LDHA-220ENST00000542179 S4R3F8 94 aa4.55□□□□□ -1.68
LDHA-220ENST00000542179 LCA10Q71F78 164 aa4.54□□□□□ -1.68
LDHA-220ENST00000542179 Q1T7F1 81 aa4.5□□□□□ -1.69
LDHA-220ENST00000542179 CSAG1Q6PB30 78 aa4.49□□□□□ -1.69
LDHA-220ENST00000542179 LINC01558Q9Y6Z2 57 aa4.48□□□□□ -1.69
LDHA-220ENST00000542179 MT1HP80294 61 aa4.42□□□□□ -1.7
LDHA-220ENST00000542179 A0A1B0GU69 56 aa4.41□□□□□ -1.7
LDHA-220ENST00000542179 H0YAA0 97 aa4.41□□□□□ -1.7
LDHA-220ENST00000542179 PRR15LQ9BU68 103 aa4.4□□□□□ -1.71
LDHA-220ENST00000542179 KRTAP2-2Q9BYT5 123 aa4.4□□□□□ -1.71
LDHA-220ENST00000542179 FLGP20930 4061 aaPredicted RBP4.39□□□□□ -1.71
LDHA-220ENST00000542179 SSPOA2VEC9 5147 aa4.37□□□□□ -1.71
LDHA-220ENST00000542179 PSPHP1O15172 72 aa4.37□□□□□ -1.71
LDHA-220ENST00000542179 KRTAP10-7P60409 375 aaPredicted RBP4.37□□□□□ -1.71
LDHA-220ENST00000542179 PMAIP1Q13794 54 aa4.36□□□□□ -1.71
LDHA-220ENST00000542179 KRTAP10-6P60371 365 aaPredicted RBP4.35□□□□□ -1.71
LDHA-220ENST00000542179 Q5VV11 94 aa4.35□□□□□ -1.71
LDHA-220ENST00000542179 M0R2T5 61 aa4.34□□□□□ -1.71
LDHA-220ENST00000542179 ADM2Q7Z4H4 148 aa4.34□□□□□ -1.71
LDHA-220ENST00000542179 BRK1Q8WUW1 75 aa4.32□□□□□ -1.72
LDHA-220ENST00000542179 P0C880 135 aa4.3□□□□□ -1.72
LDHA-220ENST00000542179 A0A1B0GU33 70 aa4.29□□□□□ -1.72
LDHA-220ENST00000542179 SYNE2Q8WXH0 6885 aaKnown RBP4.29□□□□□ -1.72
LDHA-220ENST00000542179 UQCR11O14957 56 aa4.27□□□□□ -1.73
LDHA-220ENST00000542179 A0A0A0MQY5 61 aa4.25□□□□□ -1.73
LDHA-220ENST00000542179 CRIPTQ9P021 101 aa4.25□□□□□ -1.73
LDHA-220ENST00000542179 A6NED7 52 aa4.24□□□□□ -1.73
LDHA-220ENST00000542179 M0QZ58 72 aa4.24□□□□□ -1.73
LDHA-220ENST00000542179 MT2AP02795 61 aa4.23□□□□□ -1.73
LDHA-220ENST00000542179 MT3P25713 68 aa4.23□□□□□ -1.73
LDHA-220ENST00000542179 SPATA8Q6RVD6 105 aa4.23□□□□□ -1.73
LDHA-220ENST00000542179 MIR22HGQ0VDD5 57 aa4.21□□□□□ -1.74
LDHA-220ENST00000542179 KRTAP5-11Q6L8G4 156 aa4.21□□□□□ -1.74
LDHA-220ENST00000542179 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.21□□□□□ -1.74
LDHA-220ENST00000542179 NEBP20929 6669 aa4.21□□□□□ -1.74
LDHA-220ENST00000542179 MT1FP04733 61 aa4.2□□□□□ -1.74
LDHA-220ENST00000542179 KRTAP13-4Q3LI77 160 aa4.2□□□□□ -1.74
LDHA-220ENST00000542179 R4GN34 69 aa4.2□□□□□ -1.74
LDHA-220ENST00000542179 CDC42SE1Q9NRR8 79 aa4.19□□□□□ -1.74
LDHA-220ENST00000542179 KTN1-AS1Q86SY8 53 aa4.18□□□□□ -1.74
LDHA-220ENST00000542179 KRTAP10-10P60014 251 aa4.17□□□□□ -1.74
LDHA-220ENST00000542179 LCE1EQ5T753 118 aa4.17□□□□□ -1.74
LDHA-220ENST00000542179 MACF1Q9UPN3 7388 aaKnown RBP4.16□□□□□ -1.74
LDHA-220ENST00000542179 SPRR2GQ9BYE4 73 aa4.15□□□□□ -1.75
LDHA-220ENST00000542179 A8MU10 97 aa4.12□□□□□ -1.75
LDHA-220ENST00000542179 KRTAP20-1Q3LI63 56 aa4.12□□□□□ -1.75
LDHA-220ENST00000542179 USH2AO75445 5202 aa4.12□□□□□ -1.75
LDHA-220ENST00000542179 A0A0D9SG42 100 aa4.09□□□□□ -1.75
LDHA-220ENST00000542179 A6NN06 94 aa4.09□□□□□ -1.75
LDHA-220ENST00000542179 FCGBPQ9Y6R7 5405 aaPredicted RBP4.08□□□□□ -1.76
LDHA-220ENST00000542179 LINC01554Q52M75 96 aa4.07□□□□□ -1.76
LDHA-220ENST00000542179 GPR98Q8WXG9 6306 aa4.06□□□□□ -1.76
LDHA-220ENST00000542179 KRTAP12-1P59990 96 aa4.05□□□□□ -1.76
LDHA-220ENST00000542179 KRTAP19-8Q3LI54 63 aa4.05□□□□□ -1.76
LDHA-220ENST00000542179 K7ERS5 55 aa4.04□□□□□ -1.76
LDHA-220ENST00000542179 KRTAP12-2P59991 146 aa4.03□□□□□ -1.76
LDHA-220ENST00000542179 SPINT4Q6UDR6 99 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms