RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 COX7CP15954 63 aa5.9□□□□□ -1.46
SCARB1-207ENST00000541661 C7orf65Q6ZTY9 151 aa5.9□□□□□ -1.46
SCARB1-207ENST00000541661 NDUFS5O43920 106 aa5.89□□□□□ -1.47
SCARB1-207ENST00000541661 KRTAP10-5P60370 271 aa5.89□□□□□ -1.47
SCARB1-207ENST00000541661 Q5W150 140 aa5.89□□□□□ -1.47
SCARB1-207ENST00000541661 SPRR2GQ9BYE4 73 aa5.89□□□□□ -1.47
SCARB1-207ENST00000541661 TRAV7A0A075B6U4 112 aa5.87□□□□□ -1.47
SCARB1-207ENST00000541661 MDN1Q9NU22 5596 aa5.86□□□□□ -1.47
SCARB1-207ENST00000541661 CCDC179H3BU77 68 aa5.86□□□□□ -1.47
SCARB1-207ENST00000541661 K7EQZ3 153 aa5.86□□□□□ -1.47
SCARB1-207ENST00000541661 KMT2DO14686 5537 aa5.85□□□□□ -1.47
SCARB1-207ENST00000541661 C4orf26Q17RF5 130 aa5.85□□□□□ -1.47
SCARB1-207ENST00000541661 C5orf47Q569G3 176 aa5.85□□□□□ -1.47
SCARB1-207ENST00000541661 Q8N9L7 120 aa5.85□□□□□ -1.47
SCARB1-207ENST00000541661 HCG22E2RYF7 251 aa5.82□□□□□ -1.48
SCARB1-207ENST00000541661 OCR1Q9BZK8 76 aa5.82□□□□□ -1.48
SCARB1-207ENST00000541661 KRTAP3-1Q9BYR8 98 aa5.8□□□□□ -1.48
SCARB1-207ENST00000541661 CSAG1Q6PB30 78 aa5.79□□□□□ -1.48
SCARB1-207ENST00000541661 KLKP1Q107X0 134 aa5.77□□□□□ -1.49
SCARB1-207ENST00000541661 S4R3F8 94 aa5.77□□□□□ -1.49
SCARB1-207ENST00000541661 KRTAP2-3P0C7H8 128 aa5.76□□□□□ -1.49
SCARB1-207ENST00000541661 KRTAP2-4Q9BYR9 128 aa5.76□□□□□ -1.49
SCARB1-207ENST00000541661 CASC2Q6XLA1 102 aa5.75□□□□□ -1.49
SCARB1-207ENST00000541661 LCA10Q71F78 164 aa5.75□□□□□ -1.49
SCARB1-207ENST00000541661 NDUFC1O43677 76 aa5.72□□□□□ -1.49
SCARB1-207ENST00000541661 C20orf197Q8N268 126 aa5.72□□□□□ -1.49
SCARB1-207ENST00000541661 C1orf64Q8NEQ6 169 aa5.71□□□□□ -1.5
SCARB1-207ENST00000541661 TP53AIP1Q9HCN2 124 aa5.7□□□□□ -1.5
SCARB1-207ENST00000541661 H3BPC8 53 aa5.69□□□□□ -1.5
SCARB1-207ENST00000541661 TMEM258P61165 79 aa5.69□□□□□ -1.5
SCARB1-207ENST00000541661 CYSTM1Q9H1C7 97 aa5.69□□□□□ -1.5
SCARB1-207ENST00000541661 H7BZZ5 65 aa5.68□□□□□ -1.5
SCARB1-207ENST00000541661 CRIPTQ9P021 101 aa5.67□□□□□ -1.5
SCARB1-207ENST00000541661 MP68P56378 58 aa5.64□□□□□ -1.51
SCARB1-207ENST00000541661 SNURFQ9Y675 71 aa5.64□□□□□ -1.51
SCARB1-207ENST00000541661 RPS28P62857 69 aaKnown RBP5.62□□□□□ -1.51
SCARB1-207ENST00000541661 TRAV22A0A0B4J277 110 aa5.61□□□□□ -1.51
SCARB1-207ENST00000541661 SPRR2EP22531 72 aa5.61□□□□□ -1.51
SCARB1-207ENST00000541661 SPRR2BP35325 72 aa5.61□□□□□ -1.51
SCARB1-207ENST00000541661 SPRR2AP35326 72 aa5.61□□□□□ -1.51
SCARB1-207ENST00000541661 ATP5EP56381 51 aaPredicted RBP5.61□□□□□ -1.51
SCARB1-207ENST00000541661 SPRR2FQ96RM1 72 aa5.61□□□□□ -1.51
SCARB1-207ENST00000541661 H0Y9P7 68 aa5.59□□□□□ -1.51
SCARB1-207ENST00000541661 LINC00208Q96KT6 92 aa5.57□□□□□ -1.52
SCARB1-207ENST00000541661 KRTAP2-2Q9BYT5 123 aa5.56□□□□□ -1.52
SCARB1-207ENST00000541661 KRTAP2-1Q9BYU5 128 aa5.56□□□□□ -1.52
SCARB1-207ENST00000541661 SPANXA2-OT1Q8N9U9 137 aa5.55□□□□□ -1.52
SCARB1-207ENST00000541661 CYP4F30PQ9H0H9 118 aa5.53□□□□□ -1.52
SCARB1-207ENST00000541661 LOC101927531A0A1B0GV80 90 aa5.52□□□□□ -1.53
SCARB1-207ENST00000541661 LCE1AQ5T7P2 110 aa5.52□□□□□ -1.53
SCARB1-207ENST00000541661 PRO2289Q9P1D8 64 aa5.52□□□□□ -1.53
SCARB1-207ENST00000541661 SERP1Q9Y6X1 66 aa5.52□□□□□ -1.53
SCARB1-207ENST00000541661 H0YAA0 97 aa5.51□□□□□ -1.53
SCARB1-207ENST00000541661 MT1XP80297 61 aa5.5□□□□□ -1.53
SCARB1-207ENST00000541661 KRTAP8-1Q8IUC2 63 aa5.5□□□□□ -1.53
SCARB1-207ENST00000541661 KRTAP12-2P59991 146 aa5.46□□□□□ -1.54
SCARB1-207ENST00000541661 A8MUN3 132 aa5.43□□□□□ -1.54
SCARB1-207ENST00000541661 SPRR2DP22532 72 aa5.43□□□□□ -1.54
SCARB1-207ENST00000541661 PLAC4Q8WY50 150 aa5.41□□□□□ -1.54
SCARB1-207ENST00000541661 SMIM26A0A096LP01 95 aa5.4□□□□□ -1.54
SCARB1-207ENST00000541661 ADM2Q7Z4H4 148 aa5.39□□□□□ -1.55
SCARB1-207ENST00000541661 KRTAP4-8A0A0G2JLE6 195 aa5.36□□□□□ -1.55
SCARB1-207ENST00000541661 KRTAP4-8Q9BYQ9 185 aa5.36□□□□□ -1.55
SCARB1-207ENST00000541661 DMAC1Q96GE9 116 aa5.33□□□□□ -1.56
SCARB1-207ENST00000541661 ACYP2P14621 99 aa5.32□□□□□ -1.56
SCARB1-207ENST00000541661 LCE3BQ5TA77 95 aa5.32□□□□□ -1.56
SCARB1-207ENST00000541661 COA5Q86WW8 74 aa5.3□□□□□ -1.56
SCARB1-207ENST00000541661 Q1T7F1 81 aa5.29□□□□□ -1.56
SCARB1-207ENST00000541661 R4GN34 69 aa5.28□□□□□ -1.56
SCARB1-207ENST00000541661 V9GYY9 64 aa5.27□□□□□ -1.57
SCARB1-207ENST00000541661 KRTAP10-7P60409 375 aaPredicted RBP5.24□□□□□ -1.57
SCARB1-207ENST00000541661 KRTAP10-12P60413 245 aa5.24□□□□□ -1.57
SCARB1-207ENST00000541661 P0C880 135 aa5.23□□□□□ -1.57
SCARB1-207ENST00000541661 M0QZ58 72 aa5.22□□□□□ -1.57
SCARB1-207ENST00000541661 GPR98Q8WXG9 6306 aa5.2□□□□□ -1.58
SCARB1-207ENST00000541661 LINC01558Q9Y6Z2 57 aa5.19□□□□□ -1.58
SCARB1-207ENST00000541661 CHKB-CPT1BH3BT56 60 aa5.16□□□□□ -1.58
SCARB1-207ENST00000541661 LINC01554Q52M75 96 aa5.14□□□□□ -1.59
SCARB1-207ENST00000541661 DSTQ03001 7570 aaKnown RBP5.12□□□□□ -1.59
SCARB1-207ENST00000541661 SPTSSBQ8NFR3 76 aa5.11□□□□□ -1.59
SCARB1-207ENST00000541661 PSPHP1O15172 72 aa5.07□□□□□ -1.6
SCARB1-207ENST00000541661 PRR15LQ9BU68 103 aa5.06□□□□□ -1.6
SCARB1-207ENST00000541661 KRTAP4-9Q9BYQ8 210 aa5.02□□□□□ -1.61
SCARB1-207ENST00000541661 A0A1B0GU69 56 aa5.01□□□□□ -1.61
SCARB1-207ENST00000541661 LCE5AQ5TCM9 118 aa5□□□□□ -1.61
SCARB1-207ENST00000541661 PRO0628Q9UI54 55 aa4.97□□□□□ -1.61
SCARB1-207ENST00000541661 SEC61GP60059 68 aa4.96□□□□□ -1.62
SCARB1-207ENST00000541661 A6NED7 52 aa4.94□□□□□ -1.62
SCARB1-207ENST00000541661 BRK1Q8WUW1 75 aa4.94□□□□□ -1.62
SCARB1-207ENST00000541661 KRTAP19-7Q3SYF9 63 aa4.93□□□□□ -1.62
SCARB1-207ENST00000541661 CDC42SE1Q9NRR8 79 aa4.93□□□□□ -1.62
SCARB1-207ENST00000541661 KRTAP19-3Q7Z4W3 81 aa4.92□□□□□ -1.62
SCARB1-207ENST00000541661 UQCR11O14957 56 aa4.91□□□□□ -1.62
SCARB1-207ENST00000541661 MT1EP04732 61 aa4.9□□□□□ -1.63
SCARB1-207ENST00000541661 SPATA8Q6RVD6 105 aa4.9□□□□□ -1.63
SCARB1-207ENST00000541661 LCE1DQ5T752 114 aa4.88□□□□□ -1.63
SCARB1-207ENST00000541661 LOC100996750A0A140TA64 210 aa4.85□□□□□ -1.63
SCARB1-207ENST00000541661 KRTAP4-6Q9BYQ5 205 aa4.85□□□□□ -1.63
SCARB1-207ENST00000541661 A0A1B0GU33 70 aa4.84□□□□□ -1.63
SCARB1-207ENST00000541661 MIR22HGQ0VDD5 57 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms