RNA–Protein interactions for RNA: ENST00000541589.5

LMO3-226, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-226ENST00000541589 Q8N9P0 234 aaPredicted RBP4.52□□□□□ -1.69
LMO3-226ENST00000541589 ATP5EP56381 51 aaPredicted RBP4.51□□□□□ -1.69
LMO3-226ENST00000541589 C1orf64Q8NEQ6 169 aa4.51□□□□□ -1.69
LMO3-226ENST00000541589 KRTAP13-3Q3SY46 172 aa4.49□□□□□ -1.69
LMO3-226ENST00000541589 KRTAP5-11Q6L8G4 156 aa4.48□□□□□ -1.69
LMO3-226ENST00000541589 LOC101927531A0A1B0GV80 90 aa4.47□□□□□ -1.69
LMO3-226ENST00000541589 RPS28P62857 69 aaKnown RBP4.47□□□□□ -1.69
LMO3-226ENST00000541589 Q5W150 140 aa4.47□□□□□ -1.69
LMO3-226ENST00000541589 RETNLBQ9BQ08 111 aa4.46□□□□□ -1.7
LMO3-226ENST00000541589 SPANXA2-OT1Q8N9U9 137 aa4.45□□□□□ -1.7
LMO3-226ENST00000541589 SERP1Q9Y6X1 66 aa4.45□□□□□ -1.7
LMO3-226ENST00000541589 FP248Q71RG6 208 aaPredicted RBP4.44□□□□□ -1.7
LMO3-226ENST00000541589 CYP4F30PQ9H0H9 118 aa4.43□□□□□ -1.7
LMO3-226ENST00000541589 C9orf92A6NGG3 77 aa4.43□□□□□ -1.7
LMO3-226ENST00000541589 C20orf166-AS1Q96NR2 134 aa4.43□□□□□ -1.7
LMO3-226ENST00000541589 A8MUU9 505 aa4.42□□□□□ -1.7
LMO3-226ENST00000541589 IGKV2-30P06310 120 aa4.42□□□□□ -1.7
LMO3-226ENST00000541589 PCOTHQ58A44 107 aa4.42□□□□□ -1.7
LMO3-226ENST00000541589 IGLV7-46A0A075B6I9 117 aa4.41□□□□□ -1.7
LMO3-226ENST00000541589 TPRXLQ17RH7 258 aa4.41□□□□□ -1.7
LMO3-226ENST00000541589 LCE1AQ5T7P2 110 aa4.37□□□□□ -1.71
LMO3-226ENST00000541589 Q75L30 129 aa4.37□□□□□ -1.71
LMO3-226ENST00000541589 KRTAP4-1Q9BYQ7 146 aa4.37□□□□□ -1.71
LMO3-226ENST00000541589 IGKV2D-30A0A075B6S6 120 aa4.36□□□□□ -1.71
LMO3-226ENST00000541589 C7orf65Q6ZTY9 151 aa4.36□□□□□ -1.71
LMO3-226ENST00000541589 HRES1P13985 223 aa4.35□□□□□ -1.71
LMO3-226ENST00000541589 SMIM26A0A096LP01 95 aa4.34□□□□□ -1.71
LMO3-226ENST00000541589 KRTAP10-7P60409 375 aaPredicted RBP4.32□□□□□ -1.72
LMO3-226ENST00000541589 RPL37P61927 97 aaKnown RBP4.32□□□□□ -1.72
LMO3-226ENST00000541589 ATP11AUNQ6ZP68 121 aa4.3□□□□□ -1.72
LMO3-226ENST00000541589 COA5Q86WW8 74 aa4.3□□□□□ -1.72
LMO3-226ENST00000541589 DMAC1Q96GE9 116 aa4.3□□□□□ -1.72
LMO3-226ENST00000541589 KRTAP19-2Q3LHN2 52 aa4.3□□□□□ -1.72
LMO3-226ENST00000541589 ACYP2P14621 99 aa4.29□□□□□ -1.72
LMO3-226ENST00000541589 MT1HP80294 61 aa4.29□□□□□ -1.72
LMO3-226ENST00000541589 SPINK7P58062 85 aa4.28□□□□□ -1.72
LMO3-226ENST00000541589 KRTAP10-6P60371 365 aaPredicted RBP4.26□□□□□ -1.73
LMO3-226ENST00000541589 A8MUN3 132 aa4.25□□□□□ -1.73
LMO3-226ENST00000541589 SEC61BP60468 96 aaKnown RBP4.24□□□□□ -1.73
LMO3-226ENST00000541589 SEC61GP60059 68 aa4.24□□□□□ -1.73
LMO3-226ENST00000541589 C4orf26Q17RF5 130 aa4.24□□□□□ -1.73
LMO3-226ENST00000541589 Q1T7F1 81 aa4.24□□□□□ -1.73
LMO3-226ENST00000541589 MPLKIPQ8TAP9 179 aa4.24□□□□□ -1.73
LMO3-226ENST00000541589 CHKB-CPT1BH3BT56 60 aa4.23□□□□□ -1.73
LMO3-226ENST00000541589 V9GYY9 64 aa4.23□□□□□ -1.73
LMO3-226ENST00000541589 SSPOA2VEC9 5147 aa4.22□□□□□ -1.73
LMO3-226ENST00000541589 USH2AO75445 5202 aa4.21□□□□□ -1.74
LMO3-226ENST00000541589 COX6B2Q6YFQ2 88 aa4.19□□□□□ -1.74
LMO3-226ENST00000541589 FLGP20930 4061 aaPredicted RBP4.17□□□□□ -1.74
LMO3-226ENST00000541589 FCGBPQ9Y6R7 5405 aaPredicted RBP4.17□□□□□ -1.74
LMO3-226ENST00000541589 LINC01558Q9Y6Z2 57 aa4.17□□□□□ -1.74
LMO3-226ENST00000541589 SPTSSBQ8NFR3 76 aa4.14□□□□□ -1.75
LMO3-226ENST00000541589 PRR15LQ9BU68 103 aa4.14□□□□□ -1.75
LMO3-226ENST00000541589 PSPHP1O15172 72 aa4.13□□□□□ -1.75
LMO3-226ENST00000541589 MACF1Q9UPN3 7388 aaKnown RBP4.12□□□□□ -1.75
LMO3-226ENST00000541589 M0R2T5 61 aa4.11□□□□□ -1.75
LMO3-226ENST00000541589 KRTAP5-9P26371 169 aa4.11□□□□□ -1.75
LMO3-226ENST00000541589 Q5VV11 94 aa4.11□□□□□ -1.75
LMO3-226ENST00000541589 KRTAP5-1Q6L8H4 278 aa4.09□□□□□ -1.75
LMO3-226ENST00000541589 RBM12B-AS1Q9P1G2 102 aa4.09□□□□□ -1.75
LMO3-226ENST00000541589 A0A1B0GU69 56 aa4.08□□□□□ -1.76
LMO3-226ENST00000541589 SYNE2Q8WXH0 6885 aaKnown RBP4.08□□□□□ -1.76
LMO3-226ENST00000541589 H1FX-AS1Q4G0G2 97 aa4.07□□□□□ -1.76
LMO3-226ENST00000541589 KRTAP2-2Q9BYT5 123 aa4.06□□□□□ -1.76
LMO3-226ENST00000541589 S4R3F8 94 aa4.05□□□□□ -1.76
LMO3-226ENST00000541589 LCA10Q71F78 164 aa4.04□□□□□ -1.76
LMO3-226ENST00000541589 A0A0A0MQY5 61 aa4.03□□□□□ -1.76
LMO3-226ENST00000541589 KRTAP5-4Q6L8H1 288 aa4.03□□□□□ -1.76
LMO3-226ENST00000541589 BRK1Q8WUW1 75 aa4.03□□□□□ -1.76
LMO3-226ENST00000541589 A6NED7 52 aa4.02□□□□□ -1.77
LMO3-226ENST00000541589 KRTAP4-4Q9BYR3 166 aa4□□□□□ -1.77
LMO3-226ENST00000541589 PRO0628Q9UI54 55 aa3.98□□□□□ -1.77
LMO3-226ENST00000541589 UQCR11O14957 56 aa3.97□□□□□ -1.77
LMO3-226ENST00000541589 CDC42SE1Q9NRR8 79 aa3.97□□□□□ -1.77
LMO3-226ENST00000541589 CSAG1Q6PB30 78 aa3.96□□□□□ -1.78
LMO3-226ENST00000541589 KRTAP6-3Q3LI67 103 aa3.95□□□□□ -1.78
LMO3-226ENST00000541589 SPATA8Q6RVD6 105 aa3.93□□□□□ -1.78
LMO3-226ENST00000541589 A0A1B0GU33 70 aa3.92□□□□□ -1.78
LMO3-226ENST00000541589 MIR22HGQ0VDD5 57 aa3.92□□□□□ -1.78
LMO3-226ENST00000541589 A8MU10 97 aa3.92□□□□□ -1.78
LMO3-226ENST00000541589 H0YAA0 97 aa3.9□□□□□ -1.79
LMO3-226ENST00000541589 MT2AP02795 61 aa3.9□□□□□ -1.79
LMO3-226ENST00000541589 NEBP20929 6669 aa3.89□□□□□ -1.79
LMO3-226ENST00000541589 KRTAP19-6Q3LI70 58 aa3.89□□□□□ -1.79
LMO3-226ENST00000541589 LCE1EQ5T753 118 aa3.88□□□□□ -1.79
LMO3-226ENST00000541589 ADM2Q7Z4H4 148 aa3.88□□□□□ -1.79
LMO3-226ENST00000541589 MT1FP04733 61 aa3.87□□□□□ -1.79
LMO3-226ENST00000541589 P0C880 135 aa3.86□□□□□ -1.79
LMO3-226ENST00000541589 MUC12Q9UKN1 5478 aa3.83□□□□□ -1.8
LMO3-226ENST00000541589 KRTAP20-1Q3LI63 56 aa3.82□□□□□ -1.8
LMO3-226ENST00000541589 KRTAP10-10P60014 251 aa3.8□□□□□ -1.8
LMO3-226ENST00000541589 PMAIP1Q13794 54 aa3.8□□□□□ -1.8
LMO3-226ENST00000541589 KRTAP13-4Q3LI77 160 aa3.8□□□□□ -1.8
LMO3-226ENST00000541589 M0QZ58 72 aa3.79□□□□□ -1.8
LMO3-226ENST00000541589 A6NN06 94 aa3.79□□□□□ -1.8
LMO3-226ENST00000541589 MT3P25713 68 aa3.77□□□□□ -1.81
LMO3-226ENST00000541589 K7ERS5 55 aa3.75□□□□□ -1.81
LMO3-226ENST00000541589 A0A0D9SG42 100 aa3.73□□□□□ -1.81
LMO3-226ENST00000541589 R4GN34 69 aa3.73□□□□□ -1.81
LMO3-226ENST00000541589 CRIPTQ9P021 101 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms