RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 SMIM26A0A096LP01 95 aa13.85□□□□□ -0.19
CCM2-218ENST00000541586 H1FX-AS1Q4G0G2 97 aa13.84□□□□□ -0.19
CCM2-218ENST00000541586 MT1HP80294 61 aa13.73□□□□□ -0.21
CCM2-218ENST00000541586 S4R3F8 94 aa13.73□□□□□ -0.21
CCM2-218ENST00000541586 LCE2AQ5TA79 106 aaPredicted RBP13.72□□□□□ -0.21
CCM2-218ENST00000541586 FLGP20930 4061 aaPredicted RBP13.71□□□□□ -0.21
CCM2-218ENST00000541586 LCA10Q71F78 164 aa13.7□□□□□ -0.22
CCM2-218ENST00000541586 M0R2T5 61 aa13.65□□□□□ -0.22
CCM2-218ENST00000541586 SPTSSBQ8NFR3 76 aa13.65□□□□□ -0.22
CCM2-218ENST00000541586 KRTAP3-3Q9BYR6 98 aa13.65□□□□□ -0.22
CCM2-218ENST00000541586 Q1T7F1 81 aa13.61□□□□□ -0.23
CCM2-218ENST00000541586 V9GYY9 64 aa13.55□□□□□ -0.24
CCM2-218ENST00000541586 LINC01558Q9Y6Z2 57 aa13.53□□□□□ -0.24
CCM2-218ENST00000541586 CSAG1Q6PB30 78 aa13.42□□□□□ -0.26
CCM2-218ENST00000541586 PSPHP1O15172 72 aa13.41□□□□□ -0.26
CCM2-218ENST00000541586 PRR15LQ9BU68 103 aa13.41□□□□□ -0.26
CCM2-218ENST00000541586 A0A1B0GU69 56 aa13.35□□□□□ -0.27
CCM2-218ENST00000541586 KRTAP10-6P60371 365 aaPredicted RBP13.35□□□□□ -0.27
CCM2-218ENST00000541586 LORP23490 312 aaPredicted RBP13.28□□□□□ -0.28
CCM2-218ENST00000541586 SEC61GP60059 68 aa13.28□□□□□ -0.28
CCM2-218ENST00000541586 Q5VV11 94 aa13.27□□□□□ -0.28
CCM2-218ENST00000541586 KRTAP3-2Q9BYR7 98 aa13.14□□□□□ -0.31
CCM2-218ENST00000541586 ADM2Q7Z4H4 148 aa13.12□□□□□ -0.31
CCM2-218ENST00000541586 H0YAA0 97 aa13.1□□□□□ -0.31
CCM2-218ENST00000541586 KRTAP9-8Q9BYQ0 159 aa13.1□□□□□ -0.31
CCM2-218ENST00000541586 P0C880 135 aa13.05□□□□□ -0.32
CCM2-218ENST00000541586 MT2AP02795 61 aa12.99□□□□□ -0.33
CCM2-218ENST00000541586 A0A1B0GU33 70 aa12.98□□□□□ -0.33
CCM2-218ENST00000541586 A6NED7 52 aa12.97□□□□□ -0.33
CCM2-218ENST00000541586 UQCR11O14957 56 aa12.93□□□□□ -0.34
CCM2-218ENST00000541586 KRTAP10-10P60014 251 aa12.93□□□□□ -0.34
CCM2-218ENST00000541586 MT1FP04733 61 aa12.91□□□□□ -0.34
CCM2-218ENST00000541586 MIR22HGQ0VDD5 57 aa12.78□□□□□ -0.36
CCM2-218ENST00000541586 SPATA8Q6RVD6 105 aa12.78□□□□□ -0.36
CCM2-218ENST00000541586 BRK1Q8WUW1 75 aa12.78□□□□□ -0.36
CCM2-218ENST00000541586 KRTAP13-4Q3LI77 160 aa12.76□□□□□ -0.37
CCM2-218ENST00000541586 LCE2DQ5TA82 110 aaPredicted RBP12.74□□□□□ -0.37
CCM2-218ENST00000541586 KRTAP9-2Q9BYQ4 174 aa12.74□□□□□ -0.37
CCM2-218ENST00000541586 CDC42SE1Q9NRR8 79 aa12.73□□□□□ -0.37
CCM2-218ENST00000541586 A8MU10 97 aa12.72□□□□□ -0.37
CCM2-218ENST00000541586 M0QZ58 72 aa12.67□□□□□ -0.38
CCM2-218ENST00000541586 KRTAP9-3Q9BYQ3 159 aa12.65□□□□□ -0.38
CCM2-218ENST00000541586 R4GN34 69 aa12.65□□□□□ -0.38
CCM2-218ENST00000541586 CRIPTQ9P021 101 aa12.55□□□□□ -0.4
CCM2-218ENST00000541586 A0A0D9SG42 100 aa12.51□□□□□ -0.41
CCM2-218ENST00000541586 LCE2BO14633 110 aa12.46□□□□□ -0.41
CCM2-218ENST00000541586 PRO0628Q9UI54 55 aa12.44□□□□□ -0.42
CCM2-218ENST00000541586 LINC01554Q52M75 96 aa12.43□□□□□ -0.42
CCM2-218ENST00000541586 FSIP2Q5CZC0 6907 aa12.42□□□□□ -0.42
CCM2-218ENST00000541586 KRTAP19-1Q8IUB9 90 aa12.37□□□□□ -0.43
CCM2-218ENST00000541586 USH2AO75445 5202 aa12.34□□□□□ -0.43
CCM2-218ENST00000541586 SPRR2GQ9BYE4 73 aa12.34□□□□□ -0.43
CCM2-218ENST00000541586 KRTAP12-1P59990 96 aa12.25□□□□□ -0.45
CCM2-218ENST00000541586 KRTAP12-2P59991 146 aa12.23□□□□□ -0.45
CCM2-218ENST00000541586 SPINT4Q6UDR6 99 aa12.22□□□□□ -0.45
CCM2-218ENST00000541586 K7ERS5 55 aa12.19□□□□□ -0.46
CCM2-218ENST00000541586 CRCT1Q9UGL9 99 aa12.17□□□□□ -0.46
CCM2-218ENST00000541586 A6NN06 94 aa12.17□□□□□ -0.46
CCM2-218ENST00000541586 SSPOA2VEC9 5147 aa12.09□□□□□ -0.47
CCM2-218ENST00000541586 KRTAP19-8Q3LI54 63 aa12.08□□□□□ -0.47
CCM2-218ENST00000541586 PMAIP1Q13794 54 aa12.07□□□□□ -0.48
CCM2-218ENST00000541586 KRTAP9-6A0A140TA67 174 aa12.05□□□□□ -0.48
CCM2-218ENST00000541586 MT1BP07438 61 aa12.02□□□□□ -0.49
CCM2-218ENST00000541586 PLAC4Q8WY50 150 aa11.9□□□□□ -0.5
CCM2-218ENST00000541586 KRTAP19-6Q3LI70 58 aa11.83□□□□□ -0.52
CCM2-218ENST00000541586 CAMK2N1Q7Z7J9 78 aa11.83□□□□□ -0.52
CCM2-218ENST00000541586 SVIPQ8NHG7 77 aa11.8□□□□□ -0.52
CCM2-218ENST00000541586 FCGBPQ9Y6R7 5405 aaPredicted RBP11.71□□□□□ -0.54
CCM2-218ENST00000541586 ROMO1P60602 79 aa11.69□□□□□ -0.54
CCM2-218ENST00000541586 C10orf95Q9H7T3 257 aa11.61□□□□□ -0.55
CCM2-218ENST00000541586 KRTAP10-5P60370 271 aa11.57□□□□□ -0.56
CCM2-218ENST00000541586 KTN1-AS1Q86SY8 53 aa11.53□□□□□ -0.56
CCM2-218ENST00000541586 MT1XP80297 61 aa11.49□□□□□ -0.57
CCM2-218ENST00000541586 PRO2289Q9P1D8 64 aa11.46□□□□□ -0.57
CCM2-218ENST00000541586 PRAC1Q96KF2 57 aa11.35□□□□□ -0.59
CCM2-218ENST00000541586 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.27□□□□□ -0.61
CCM2-218ENST00000541586 MACF1Q9UPN3 7388 aaKnown RBP11.26□□□□□ -0.61
CCM2-218ENST00000541586 KRTAP25-1Q3LHN0 102 aa11.25□□□□□ -0.61
CCM2-218ENST00000541586 TNP1P09430 55 aa11.23□□□□□ -0.61
CCM2-218ENST00000541586 KRTAP10-7P60409 375 aaPredicted RBP11.03□□□□□ -0.64
CCM2-218ENST00000541586 SYNE2Q8WXH0 6885 aaKnown RBP11.02□□□□□ -0.65
CCM2-218ENST00000541586 KMT2DO14686 5537 aa10.99□□□□□ -0.65
CCM2-218ENST00000541586 KRTAP9-7A8MTY7 169 aa10.93□□□□□ -0.66
CCM2-218ENST00000541586 KRTAP10-12P60413 245 aa10.87□□□□□ -0.67
CCM2-218ENST00000541586 KRTAP23-1A1A580 65 aa10.85□□□□□ -0.67
CCM2-218ENST00000541586 PP632Q6XCG6 107 aa10.84□□□□□ -0.67
CCM2-218ENST00000541586 KRTAP4-8A0A0G2JLE6 195 aa10.81□□□□□ -0.68
CCM2-218ENST00000541586 LCE3AQ5TA76 89 aa10.81□□□□□ -0.68
CCM2-218ENST00000541586 KRTAP4-8Q9BYQ9 185 aa10.81□□□□□ -0.68
CCM2-218ENST00000541586 KRTAP6-3Q3LI67 103 aa10.75□□□□□ -0.69
CCM2-218ENST00000541586 KRTAP8-1Q8IUC2 63 aa10.71□□□□□ -0.69
CCM2-218ENST00000541586 KRTAP5-9P26371 169 aa10.55□□□□□ -0.72
CCM2-218ENST00000541586 SPRR2FQ96RM1 72 aa10.53□□□□□ -0.72
CCM2-218ENST00000541586 MUC12Q9UKN1 5478 aa10.52□□□□□ -0.73
CCM2-218ENST00000541586 KRTAP12-3P60328 96 aa10.36□□□□□ -0.75
CCM2-218ENST00000541586 KRTAP19-5Q3LI72 72 aa10.36□□□□□ -0.75
CCM2-218ENST00000541586 MDN1Q9NU22 5596 aa10.32□□□□□ -0.76
CCM2-218ENST00000541586 KRTAP19-7Q3SYF9 63 aa10.25□□□□□ -0.77
CCM2-218ENST00000541586 SPRR2EP22531 72 aa10.18□□□□□ -0.78
CCM2-218ENST00000541586 SPRR2BP35325 72 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms