RNA–Protein interactions for RNA: ENST00000541496.1

SPARCL1-209, Transcript of SPARC like 1, humanhuman

TSL 2

Gene SPARCL1, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-209ENST00000541496 ATOX1O00244 68 aa2.56□□□□□ -2
SPARCL1-209ENST00000541496 C7orf65Q6ZTY9 151 aa2.56□□□□□ -2
SPARCL1-209ENST00000541496 SMIM20Q8N5G0 67 aa2.56□□□□□ -2
SPARCL1-209ENST00000541496 MUC17Q685J3 4493 aa2.56□□□□□ -2
SPARCL1-209ENST00000541496 A0A0U1RQV1 116 aa2.55□□□□□ -2
SPARCL1-209ENST00000541496 LOC101927531A0A1B0GV80 90 aa2.55□□□□□ -2
SPARCL1-209ENST00000541496 HRES1P13985 223 aa2.55□□□□□ -2
SPARCL1-209ENST00000541496 KRTAP19-2Q3LHN2 52 aa2.55□□□□□ -2
SPARCL1-209ENST00000541496 C5orf47Q569G3 176 aa2.55□□□□□ -2
SPARCL1-209ENST00000541496 TRAV7A0A075B6U4 112 aa2.54□□□□□ -2
SPARCL1-209ENST00000541496 H0Y9P7 68 aa2.54□□□□□ -2
SPARCL1-209ENST00000541496 H3BPC8 53 aa2.54□□□□□ -2
SPARCL1-209ENST00000541496 MP68P56378 58 aa2.53□□□□□ -2
SPARCL1-209ENST00000541496 CYP4F30PQ9H0H9 118 aa2.53□□□□□ -2
SPARCL1-209ENST00000541496 SERP2Q8N6R1 65 aa2.52□□□□□ -2.01
SPARCL1-209ENST00000541496 C1orf64Q8NEQ6 169 aa2.52□□□□□ -2.01
SPARCL1-209ENST00000541496 RBM12B-AS1Q9P1G2 102 aa2.52□□□□□ -2.01
SPARCL1-209ENST00000541496 LINC00208Q96KT6 92 aa2.51□□□□□ -2.01
SPARCL1-209ENST00000541496 MUC2Q02817 5179 aa2.5□□□□□ -2.01
SPARCL1-209ENST00000541496 COX6B2Q6YFQ2 88 aa2.49□□□□□ -2.01
SPARCL1-209ENST00000541496 FAM236DA0A1B0GTK5 79 aa2.48□□□□□ -2.01
SPARCL1-209ENST00000541496 FAM236CP0DP71 79 aa2.48□□□□□ -2.01
SPARCL1-209ENST00000541496 COX7CP15954 63 aa2.48□□□□□ -2.01
SPARCL1-209ENST00000541496 C4orf26Q17RF5 130 aa2.48□□□□□ -2.01
SPARCL1-209ENST00000541496 ANAPC13Q9BS18 74 aa2.48□□□□□ -2.01
SPARCL1-209ENST00000541496 MT1HP80294 61 aa2.47□□□□□ -2.01
SPARCL1-209ENST00000541496 KLKP1Q107X0 134 aa2.47□□□□□ -2.01
SPARCL1-209ENST00000541496 H1FX-AS1Q4G0G2 97 aa2.47□□□□□ -2.01
SPARCL1-209ENST00000541496 A8MUN3 132 aa2.46□□□□□ -2.02
SPARCL1-209ENST00000541496 C20orf197Q8N268 126 aa2.46□□□□□ -2.02
SPARCL1-209ENST00000541496 RPS28P62857 69 aaKnown RBP2.45□□□□□ -2.02
SPARCL1-209ENST00000541496 RNF213Q63HN8 5207 aa2.44□□□□□ -2.02
SPARCL1-209ENST00000541496 NDUFC1O43677 76 aa2.44□□□□□ -2.02
SPARCL1-209ENST00000541496 SPANXA2-OT1Q8N9U9 137 aa2.44□□□□□ -2.02
SPARCL1-209ENST00000541496 DMAC1Q96GE9 116 aa2.44□□□□□ -2.02
SPARCL1-209ENST00000541496 SNURFQ9Y675 71 aa2.44□□□□□ -2.02
SPARCL1-209ENST00000541496 CCDC179H3BU77 68 aa2.41□□□□□ -2.02
SPARCL1-209ENST00000541496 H7BZZ5 65 aa2.41□□□□□ -2.02
SPARCL1-209ENST00000541496 M0R2T5 61 aa2.41□□□□□ -2.02
SPARCL1-209ENST00000541496 FAT4Q6V0I7 4981 aa2.41□□□□□ -2.02
SPARCL1-209ENST00000541496 CYSTM1Q9H1C7 97 aa2.4□□□□□ -2.03
SPARCL1-209ENST00000541496 S4R3F8 94 aa2.4□□□□□ -2.03
SPARCL1-209ENST00000541496 ACYP2P14621 99 aa2.39□□□□□ -2.03
SPARCL1-209ENST00000541496 TMEM258P61165 79 aa2.39□□□□□ -2.03
SPARCL1-209ENST00000541496 LCA10Q71F78 164 aa2.39□□□□□ -2.03
SPARCL1-209ENST00000541496 CSAG1Q6PB30 78 aa2.38□□□□□ -2.03
SPARCL1-209ENST00000541496 ATP5EP56381 51 aaPredicted RBP2.36□□□□□ -2.03
SPARCL1-209ENST00000541496 FLGP20930 4061 aaPredicted RBP2.36□□□□□ -2.03
SPARCL1-209ENST00000541496 H0YAA0 97 aa2.35□□□□□ -2.03
SPARCL1-209ENST00000541496 MT2AP02795 61 aa2.35□□□□□ -2.03
SPARCL1-209ENST00000541496 KRTAP10-5P60370 271 aa2.35□□□□□ -2.03
SPARCL1-209ENST00000541496 KRTAP5-1Q6L8H4 278 aa2.35□□□□□ -2.03
SPARCL1-209ENST00000541496 SPTSSBQ8NFR3 76 aa2.34□□□□□ -2.03
SPARCL1-209ENST00000541496 CHKB-CPT1BH3BT56 60 aa2.33□□□□□ -2.04
SPARCL1-209ENST00000541496 MT1FP04733 61 aa2.33□□□□□ -2.04
SPARCL1-209ENST00000541496 COA5Q86WW8 74 aa2.33□□□□□ -2.04
SPARCL1-209ENST00000541496 PRO0628Q9UI54 55 aa2.32□□□□□ -2.04
SPARCL1-209ENST00000541496 KRTAP10-10P60014 251 aa2.31□□□□□ -2.04
SPARCL1-209ENST00000541496 KRTAP10-12P60413 245 aa2.31□□□□□ -2.04
SPARCL1-209ENST00000541496 LCE1FQ5T754 118 aa2.31□□□□□ -2.04
SPARCL1-209ENST00000541496 NDUFAF8A1L188 74 aa2.3□□□□□ -2.04
SPARCL1-209ENST00000541496 SERP1Q9Y6X1 66 aa2.3□□□□□ -2.04
SPARCL1-209ENST00000541496 ADM2Q7Z4H4 148 aa2.28□□□□□ -2.04
SPARCL1-209ENST00000541496 CRIPTQ9P021 101 aa2.28□□□□□ -2.04
SPARCL1-209ENST00000541496 SMIM26A0A096LP01 95 aa2.27□□□□□ -2.05
SPARCL1-209ENST00000541496 SPRR2GQ9BYE4 73 aa2.26□□□□□ -2.05
SPARCL1-209ENST00000541496 KRTAP9-6A8MVA2 160 aa2.25□□□□□ -2.05
SPARCL1-209ENST00000541496 P0C880 135 aa2.25□□□□□ -2.05
SPARCL1-209ENST00000541496 KRTAP4-4Q9BYR3 166 aa2.25□□□□□ -2.05
SPARCL1-209ENST00000541496 KRTAP5-4Q6L8H1 288 aa2.24□□□□□ -2.05
SPARCL1-209ENST00000541496 SEC61GP60059 68 aa2.23□□□□□ -2.05
SPARCL1-209ENST00000541496 M0QZ58 72 aa2.22□□□□□ -2.05
SPARCL1-209ENST00000541496 KRTAP19-8Q3LI54 63 aa2.22□□□□□ -2.05
SPARCL1-209ENST00000541496 LINC01558Q9Y6Z2 57 aa2.22□□□□□ -2.05
SPARCL1-209ENST00000541496 R4GN34 69 aa2.22□□□□□ -2.05
SPARCL1-209ENST00000541496 V9GYY9 64 aa2.22□□□□□ -2.05
SPARCL1-209ENST00000541496 KRTAP5-9P26371 169 aa2.21□□□□□ -2.06
SPARCL1-209ENST00000541496 PRAC1Q96KF2 57 aa2.21□□□□□ -2.06
SPARCL1-209ENST00000541496 A0A1B0GU69 56 aa2.2□□□□□ -2.06
SPARCL1-209ENST00000541496 Q5VV11 94 aa2.2□□□□□ -2.06
SPARCL1-209ENST00000541496 MT1BP07438 61 aa2.19□□□□□ -2.06
SPARCL1-209ENST00000541496 Q1T7F1 81 aa2.19□□□□□ -2.06
SPARCL1-209ENST00000541496 PRR15LQ9BU68 103 aa2.19□□□□□ -2.06
SPARCL1-209ENST00000541496 A0A1B0GU33 70 aa2.18□□□□□ -2.06
SPARCL1-209ENST00000541496 A6NN06 94 aa2.17□□□□□ -2.06
SPARCL1-209ENST00000541496 KRTAP13-4Q3LI77 160 aa2.17□□□□□ -2.06
SPARCL1-209ENST00000541496 PMAIP1Q13794 54 aa2.16□□□□□ -2.06
SPARCL1-209ENST00000541496 LCE3CQ5T5A8 94 aa2.16□□□□□ -2.06
SPARCL1-209ENST00000541496 CRCT1Q9UGL9 99 aa2.16□□□□□ -2.06
SPARCL1-209ENST00000541496 KRTAP19-6Q3LI70 58 aa2.15□□□□□ -2.07
SPARCL1-209ENST00000541496 BRK1Q8WUW1 75 aa2.15□□□□□ -2.07
SPARCL1-209ENST00000541496 LINC01554Q52M75 96 aa2.14□□□□□ -2.07
SPARCL1-209ENST00000541496 SPATA8Q6RVD6 105 aa2.13□□□□□ -2.07
SPARCL1-209ENST00000541496 PLAC4Q8WY50 150 aa2.13□□□□□ -2.07
SPARCL1-209ENST00000541496 UQCR11O14957 56 aa2.12□□□□□ -2.07
SPARCL1-209ENST00000541496 PSPHP1O15172 72 aa2.11□□□□□ -2.07
SPARCL1-209ENST00000541496 KTN1-AS1Q86SY8 53 aa2.11□□□□□ -2.07
SPARCL1-209ENST00000541496 A0A0D9SG42 100 aa2.1□□□□□ -2.07
SPARCL1-209ENST00000541496 KRTAP12-1P59990 96 aa2.09□□□□□ -2.07
SPARCL1-209ENST00000541496 MT1XP80297 61 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms