RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 C7orf65Q6ZTY9 151 aa4.77□□□□□ -1.65
DDX55-208ENST00000541259 LINC00208Q96KT6 92 aa4.77□□□□□ -1.65
DDX55-208ENST00000541259 C1orf64Q8NEQ6 169 aa4.76□□□□□ -1.65
DDX55-208ENST00000541259 CYP4F30PQ9H0H9 118 aa4.76□□□□□ -1.65
DDX55-208ENST00000541259 LOC101927531A0A1B0GV80 90 aa4.75□□□□□ -1.65
DDX55-208ENST00000541259 MP68P56378 58 aa4.75□□□□□ -1.65
DDX55-208ENST00000541259 KRTAP19-2Q3LHN2 52 aa4.75□□□□□ -1.65
DDX55-208ENST00000541259 SERP2Q8N6R1 65 aa4.75□□□□□ -1.65
DDX55-208ENST00000541259 FLGP20930 4061 aaPredicted RBP4.72□□□□□ -1.65
DDX55-208ENST00000541259 KLKP1Q107X0 134 aa4.72□□□□□ -1.65
DDX55-208ENST00000541259 A0A0U1RQV1 116 aa4.71□□□□□ -1.66
DDX55-208ENST00000541259 H3BPC8 53 aa4.71□□□□□ -1.66
DDX55-208ENST00000541259 C4orf26Q17RF5 130 aa4.71□□□□□ -1.66
DDX55-208ENST00000541259 SNURFQ9Y675 71 aa4.7□□□□□ -1.66
DDX55-208ENST00000541259 COX7CP15954 63 aa4.69□□□□□ -1.66
DDX55-208ENST00000541259 C20orf197Q8N268 126 aa4.69□□□□□ -1.66
DDX55-208ENST00000541259 ANAPC13Q9BS18 74 aa4.69□□□□□ -1.66
DDX55-208ENST00000541259 RBM12B-AS1Q9P1G2 102 aa4.69□□□□□ -1.66
DDX55-208ENST00000541259 COX6B2Q6YFQ2 88 aa4.68□□□□□ -1.66
DDX55-208ENST00000541259 FAM236DA0A1B0GTK5 79 aa4.67□□□□□ -1.66
DDX55-208ENST00000541259 FAM236CP0DP71 79 aa4.67□□□□□ -1.66
DDX55-208ENST00000541259 CCDC179H3BU77 68 aa4.63□□□□□ -1.67
DDX55-208ENST00000541259 CYSTM1Q9H1C7 97 aa4.63□□□□□ -1.67
DDX55-208ENST00000541259 MT1HP80294 61 aa4.62□□□□□ -1.67
DDX55-208ENST00000541259 H1FX-AS1Q4G0G2 97 aa4.61□□□□□ -1.67
DDX55-208ENST00000541259 H7BZZ5 65 aa4.56□□□□□ -1.68
DDX55-208ENST00000541259 DMAC1Q96GE9 116 aa4.55□□□□□ -1.68
DDX55-208ENST00000541259 M0R2T5 61 aa4.54□□□□□ -1.68
DDX55-208ENST00000541259 NDUFC1O43677 76 aa4.54□□□□□ -1.68
DDX55-208ENST00000541259 A8MUN3 132 aa4.53□□□□□ -1.68
DDX55-208ENST00000541259 SPANXA2-OT1Q8N9U9 137 aa4.53□□□□□ -1.68
DDX55-208ENST00000541259 S4R3F8 94 aa4.53□□□□□ -1.68
DDX55-208ENST00000541259 LCA10Q71F78 164 aa4.52□□□□□ -1.69
DDX55-208ENST00000541259 ACYP2P14621 99 aa4.49□□□□□ -1.69
DDX55-208ENST00000541259 KRTAP10-6P60371 365 aaPredicted RBP4.48□□□□□ -1.69
DDX55-208ENST00000541259 LCE1AQ5T7P2 110 aa4.44□□□□□ -1.7
DDX55-208ENST00000541259 CSAG1Q6PB30 78 aa4.44□□□□□ -1.7
DDX55-208ENST00000541259 COA5Q86WW8 74 aa4.42□□□□□ -1.7
DDX55-208ENST00000541259 KRTAP9-8Q9BYQ0 159 aa4.42□□□□□ -1.7
DDX55-208ENST00000541259 TMEM258P61165 79 aa4.41□□□□□ -1.7
DDX55-208ENST00000541259 CHKB-CPT1BH3BT56 60 aa4.4□□□□□ -1.71
DDX55-208ENST00000541259 MT2AP02795 61 aa4.39□□□□□ -1.71
DDX55-208ENST00000541259 ATP5EP56381 51 aaPredicted RBP4.39□□□□□ -1.71
DDX55-208ENST00000541259 MT1FP04733 61 aa4.37□□□□□ -1.71
DDX55-208ENST00000541259 KRTAP10-10P60014 251 aa4.34□□□□□ -1.71
DDX55-208ENST00000541259 SPTSSBQ8NFR3 76 aa4.34□□□□□ -1.71
DDX55-208ENST00000541259 ADM2Q7Z4H4 148 aa4.31□□□□□ -1.72
DDX55-208ENST00000541259 H0YAA0 97 aa4.3□□□□□ -1.72
DDX55-208ENST00000541259 KRTAP5-3Q6L8H2 238 aa4.3□□□□□ -1.72
DDX55-208ENST00000541259 SERP1Q9Y6X1 66 aa4.29□□□□□ -1.72
DDX55-208ENST00000541259 P0C880 135 aa4.28□□□□□ -1.72
DDX55-208ENST00000541259 MT3P25713 68 aa4.23□□□□□ -1.73
DDX55-208ENST00000541259 USH2AO75445 5202 aa4.21□□□□□ -1.74
DDX55-208ENST00000541259 SEC61GP60059 68 aa4.18□□□□□ -1.74
DDX55-208ENST00000541259 RPS28P62857 69 aaKnown RBP4.18□□□□□ -1.74
DDX55-208ENST00000541259 SPRR2GQ9BYE4 73 aa4.18□□□□□ -1.74
DDX55-208ENST00000541259 CRIPTQ9P021 101 aa4.18□□□□□ -1.74
DDX55-208ENST00000541259 LINC01558Q9Y6Z2 57 aa4.18□□□□□ -1.74
DDX55-208ENST00000541259 A0A1B0GU69 56 aa4.16□□□□□ -1.74
DDX55-208ENST00000541259 M0QZ58 72 aa4.15□□□□□ -1.75
DDX55-208ENST00000541259 R4GN34 69 aa4.15□□□□□ -1.75
DDX55-208ENST00000541259 SMIM26A0A096LP01 95 aa4.14□□□□□ -1.75
DDX55-208ENST00000541259 KRTAP13-4Q3LI77 160 aa4.14□□□□□ -1.75
DDX55-208ENST00000541259 A0A1B0GU33 70 aa4.11□□□□□ -1.75
DDX55-208ENST00000541259 Q1T7F1 81 aa4.11□□□□□ -1.75
DDX55-208ENST00000541259 KRTAP19-8Q3LI54 63 aa4.11□□□□□ -1.75
DDX55-208ENST00000541259 PRAC1Q96KF2 57 aa4.11□□□□□ -1.75
DDX55-208ENST00000541259 PRR15LQ9BU68 103 aa4.11□□□□□ -1.75
DDX55-208ENST00000541259 SSPOA2VEC9 5147 aa4.11□□□□□ -1.75
DDX55-208ENST00000541259 KRTAP2-2Q9BYT5 123 aa4.1□□□□□ -1.75
DDX55-208ENST00000541259 MT1BP07438 61 aa4.09□□□□□ -1.75
DDX55-208ENST00000541259 LINC01554Q52M75 96 aa4.09□□□□□ -1.75
DDX55-208ENST00000541259 SPATA8Q6RVD6 105 aa4.09□□□□□ -1.75
DDX55-208ENST00000541259 FSIP2Q5CZC0 6907 aa4.08□□□□□ -1.76
DDX55-208ENST00000541259 PSPHP1O15172 72 aa4.08□□□□□ -1.76
DDX55-208ENST00000541259 V9GYY9 64 aa4.08□□□□□ -1.76
DDX55-208ENST00000541259 Q5VV11 94 aa4.07□□□□□ -1.76
DDX55-208ENST00000541259 A0A0D9SG42 100 aa4.03□□□□□ -1.76
DDX55-208ENST00000541259 NDUFAF8A1L188 74 aa4.01□□□□□ -1.77
DDX55-208ENST00000541259 A8MU10 97 aa4.01□□□□□ -1.77
DDX55-208ENST00000541259 CRCT1Q9UGL9 99 aa4□□□□□ -1.77
DDX55-208ENST00000541259 UQCR11O14957 56 aa3.99□□□□□ -1.77
DDX55-208ENST00000541259 PLAC4Q8WY50 150 aa3.99□□□□□ -1.77
DDX55-208ENST00000541259 A6NN06 94 aa3.97□□□□□ -1.77
DDX55-208ENST00000541259 KRTAP19-6Q3LI70 58 aa3.96□□□□□ -1.78
DDX55-208ENST00000541259 MIR22HGQ0VDD5 57 aa3.95□□□□□ -1.78
DDX55-208ENST00000541259 FCGBPQ9Y6R7 5405 aaPredicted RBP3.95□□□□□ -1.78
DDX55-208ENST00000541259 KRTAP12-1P59990 96 aa3.94□□□□□ -1.78
DDX55-208ENST00000541259 SPINT4Q6UDR6 99 aa3.94□□□□□ -1.78
DDX55-208ENST00000541259 A6NED7 52 aa3.93□□□□□ -1.78
DDX55-208ENST00000541259 KRTAP12-2P59991 146 aa3.93□□□□□ -1.78
DDX55-208ENST00000541259 KRTAP10-5P60370 271 aa3.91□□□□□ -1.78
DDX55-208ENST00000541259 MT1XP80297 61 aa3.91□□□□□ -1.78
DDX55-208ENST00000541259 CAMK2N1Q7Z7J9 78 aa3.86□□□□□ -1.79
DDX55-208ENST00000541259 CDC42SE1Q9NRR8 79 aa3.83□□□□□ -1.8
DDX55-208ENST00000541259 PRO2289Q9P1D8 64 aa3.83□□□□□ -1.8
DDX55-208ENST00000541259 K7ERS5 55 aa3.77□□□□□ -1.81
DDX55-208ENST00000541259 C10orf95Q9H7T3 257 aa3.76□□□□□ -1.81
DDX55-208ENST00000541259 KMT2DO14686 5537 aa3.75□□□□□ -1.81
DDX55-208ENST00000541259 KRTAP10-7P60409 375 aaPredicted RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms