RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 LRP1BQ9NZR2 4599 aa4.84□□□□□ -1.63
TTC39C-203ENST00000540918 ROMO1P60602 79 aa4.84□□□□□ -1.64
TTC39C-203ENST00000540918 MYCBP2O75592 4640 aa4.83□□□□□ -1.64
TTC39C-203ENST00000540918 DYNC1H1Q14204 4646 aaKnown RBP4.82□□□□□ -1.64
TTC39C-203ENST00000540918 PLAC4Q8WY50 150 aa4.81□□□□□ -1.64
TTC39C-203ENST00000540918 KRTAP3-1Q9BYR8 98 aa4.8□□□□□ -1.64
TTC39C-203ENST00000540918 H0YAA0 97 aa4.79□□□□□ -1.64
TTC39C-203ENST00000540918 DNAH17Q9UFH2 4485 aa4.78□□□□□ -1.64
TTC39C-203ENST00000540918 A6NN06 94 aa4.77□□□□□ -1.65
TTC39C-203ENST00000540918 FAT2Q9NYQ8 4349 aa4.77□□□□□ -1.65
TTC39C-203ENST00000540918 FAT3Q8TDW7 4589 aa4.76□□□□□ -1.65
TTC39C-203ENST00000540918 HECTD4Q9Y4D8 3996 aa4.76□□□□□ -1.65
TTC39C-203ENST00000540918 KRTAP10-10P60014 251 aa4.75□□□□□ -1.65
TTC39C-203ENST00000540918 RYR3Q15413 4870 aa4.75□□□□□ -1.65
TTC39C-203ENST00000540918 C10orf95Q9H7T3 257 aa4.74□□□□□ -1.65
TTC39C-203ENST00000540918 VPS13BQ7Z7G8 4022 aa4.73□□□□□ -1.65
TTC39C-203ENST00000540918 SACSQ9NZJ4 4579 aa4.72□□□□□ -1.65
TTC39C-203ENST00000540918 DYNC2H1Q8NCM8 4307 aaKnown RBP4.7□□□□□ -1.66
TTC39C-203ENST00000540918 LRP1Q07954 4544 aaKnown RBP4.69□□□□□ -1.66
TTC39C-203ENST00000540918 LUZP6Q538Z0 58 aa4.64□□□□□ -1.67
TTC39C-203ENST00000540918 APOBP04114 4563 aaKnown RBP4.63□□□□□ -1.67
TTC39C-203ENST00000540918 ALMS1Q8TCU4 4167 aa4.63□□□□□ -1.67
TTC39C-203ENST00000540918 KRTAP25-1Q3LHN0 102 aa4.62□□□□□ -1.67
TTC39C-203ENST00000540918 KRTAP17-1Q9BYP8 105 aa4.62□□□□□ -1.67
TTC39C-203ENST00000540918 EPPK1P58107 5090 aaKnown RBP4.62□□□□□ -1.67
TTC39C-203ENST00000540918 KRTAP13-4Q3LI77 160 aa4.58□□□□□ -1.68
TTC39C-203ENST00000540918 KRTAP12-2P59991 146 aa4.58□□□□□ -1.68
TTC39C-203ENST00000540918 RYR2Q92736 4967 aa4.57□□□□□ -1.68
TTC39C-203ENST00000540918 TNP1P09430 55 aa4.56□□□□□ -1.68
TTC39C-203ENST00000540918 PKD1P98161 4303 aa4.55□□□□□ -1.68
TTC39C-203ENST00000540918 KRTAP10-6P60371 365 aaPredicted RBP4.53□□□□□ -1.68
TTC39C-203ENST00000540918 KRTAP3-3Q9BYR6 98 aa4.51□□□□□ -1.69
TTC39C-203ENST00000540918 HERC2O95714 4834 aa4.49□□□□□ -1.69
TTC39C-203ENST00000540918 LRP2P98164 4655 aa4.48□□□□□ -1.69
TTC39C-203ENST00000540918 HSPG2P98160 4391 aa4.48□□□□□ -1.69
TTC39C-203ENST00000540918 KRTAP12-1P59990 96 aa4.47□□□□□ -1.69
TTC39C-203ENST00000540918 KRTAP4-1Q9BYQ7 146 aa4.45□□□□□ -1.7
TTC39C-203ENST00000540918 KRTAP3-2Q9BYR7 98 aa4.43□□□□□ -1.7
TTC39C-203ENST00000540918 MUC2Q02817 5179 aa4.43□□□□□ -1.7
TTC39C-203ENST00000540918 NDUFAF8A1L188 74 aa4.41□□□□□ -1.7
TTC39C-203ENST00000540918 LORP23490 312 aaPredicted RBP4.41□□□□□ -1.7
TTC39C-203ENST00000540918 ABCA13Q86UQ4 5058 aa4.41□□□□□ -1.7
TTC39C-203ENST00000540918 H3BS24 57 aa4.39□□□□□ -1.71
TTC39C-203ENST00000540918 LPAP08519 4548 aa4.39□□□□□ -1.71
TTC39C-203ENST00000540918 PCLOQ9Y6V0 5065 aa4.38□□□□□ -1.71
TTC39C-203ENST00000540918 HERC1Q15751 4861 aa4.35□□□□□ -1.71
TTC39C-203ENST00000540918 RNF213Q63HN8 5207 aa4.33□□□□□ -1.72
TTC39C-203ENST00000540918 PKHD1L1Q86WI1 4243 aa4.29□□□□□ -1.72
TTC39C-203ENST00000540918 PRO2289Q9P1D8 64 aa4.29□□□□□ -1.72
TTC39C-203ENST00000540918 PP632Q6XCG6 107 aa4.24□□□□□ -1.73
TTC39C-203ENST00000540918 BIRC6Q9NR09 4857 aa4.23□□□□□ -1.73
TTC39C-203ENST00000540918 FSIP2Q5CZC0 6907 aa4.21□□□□□ -1.74
TTC39C-203ENST00000540918 UBR4Q5T4S7 5183 aa4.21□□□□□ -1.74
TTC39C-203ENST00000540918 A0A0A0MQY5 61 aa4.2□□□□□ -1.74
TTC39C-203ENST00000540918 FAT4Q6V0I7 4981 aa4.19□□□□□ -1.74
TTC39C-203ENST00000540918 MT1HP80294 61 aa4.15□□□□□ -1.75
TTC39C-203ENST00000540918 TNXBP22105 4242 aa4.14□□□□□ -1.75
TTC39C-203ENST00000540918 MT2AP02795 61 aa4.07□□□□□ -1.76
TTC39C-203ENST00000540918 MT1FP04733 61 aa4.06□□□□□ -1.76
TTC39C-203ENST00000540918 KRTAP10-12P60413 245 aa4.02□□□□□ -1.77
TTC39C-203ENST00000540918 KRTAP15-1Q3LI76 137 aa4.02□□□□□ -1.77
TTC39C-203ENST00000540918 LCE3AQ5TA76 89 aa3.99□□□□□ -1.77
TTC39C-203ENST00000540918 CRCT1Q9UGL9 99 aa3.99□□□□□ -1.77
TTC39C-203ENST00000540918 HMCN2Q8NDA2 5059 aa3.96□□□□□ -1.77
TTC39C-203ENST00000540918 KRTAP12-3P60328 96 aa3.91□□□□□ -1.78
TTC39C-203ENST00000540918 LCE2CQ5TA81 110 aa3.89□□□□□ -1.79
TTC39C-203ENST00000540918 SPRR2GQ9BYE4 73 aa3.88□□□□□ -1.79
TTC39C-203ENST00000540918 KRTAP19-1Q8IUB9 90 aa3.87□□□□□ -1.79
TTC39C-203ENST00000540918 USH2AO75445 5202 aa3.82□□□□□ -1.8
TTC39C-203ENST00000540918 KRTAP9-8Q9BYQ0 159 aa3.81□□□□□ -1.8
TTC39C-203ENST00000540918 KRTAP19-2Q3LHN2 52 aa3.8□□□□□ -1.8
TTC39C-203ENST00000540918 KRTAP8-1Q8IUC2 63 aa3.78□□□□□ -1.8
TTC39C-203ENST00000540918 MUC17Q685J3 4493 aa3.77□□□□□ -1.81
TTC39C-203ENST00000540918 KRTAP10-7P60409 375 aaPredicted RBP3.74□□□□□ -1.81
TTC39C-203ENST00000540918 OBSCNQ5VST9 7968 aa3.73□□□□□ -1.81
TTC39C-203ENST00000540918 MT1BP07438 61 aa3.7□□□□□ -1.82
TTC39C-203ENST00000540918 KRTAP4-8A0A0G2JLE6 195 aa3.69□□□□□ -1.82
TTC39C-203ENST00000540918 KRTAP4-8Q9BYQ9 185 aa3.69□□□□□ -1.82
TTC39C-203ENST00000540918 FLGP20930 4061 aaPredicted RBP3.69□□□□□ -1.82
TTC39C-203ENST00000540918 KRTAP19-5Q3LI72 72 aa3.68□□□□□ -1.82
TTC39C-203ENST00000540918 MT1XP80297 61 aa3.67□□□□□ -1.82
TTC39C-203ENST00000540918 KRTAP9-3Q9BYQ3 159 aa3.67□□□□□ -1.82
TTC39C-203ENST00000540918 SPRR2FQ96RM1 72 aa3.65□□□□□ -1.82
TTC39C-203ENST00000540918 LCE2BO14633 110 aa3.64□□□□□ -1.83
TTC39C-203ENST00000540918 KRTAP19-8Q3LI54 63 aa3.64□□□□□ -1.83
TTC39C-203ENST00000540918 KRTAP10-5P60370 271 aa3.64□□□□□ -1.83
TTC39C-203ENST00000540918 SYNE1Q8NF91 8797 aaKnown RBP3.63□□□□□ -1.83
TTC39C-203ENST00000540918 KMT2DO14686 5537 aa3.6□□□□□ -1.83
TTC39C-203ENST00000540918 KRTAP23-1A1A580 65 aa3.59□□□□□ -1.83
TTC39C-203ENST00000540918 DSTQ03001 7570 aaKnown RBP3.55□□□□□ -1.84
TTC39C-203ENST00000540918 KRTAP4-7Q9BYR0 210 aa3.46□□□□□ -1.85
TTC39C-203ENST00000540918 LCE2AQ5TA79 106 aaPredicted RBP3.46□□□□□ -1.86
TTC39C-203ENST00000540918 LCE3CQ5T5A8 94 aa3.45□□□□□ -1.86
TTC39C-203ENST00000540918 FCGBPQ9Y6R7 5405 aaPredicted RBP3.44□□□□□ -1.86
TTC39C-203ENST00000540918 MT1GP13640 62 aa3.38□□□□□ -1.87
TTC39C-203ENST00000540918 SYNE2Q8WXH0 6885 aaKnown RBP3.37□□□□□ -1.87
TTC39C-203ENST00000540918 KRTAP9-2Q9BYQ4 174 aa3.36□□□□□ -1.87
TTC39C-203ENST00000540918 SPRR2EP22531 72 aa3.36□□□□□ -1.87
TTC39C-203ENST00000540918 SPRR2BP35325 72 aa3.36□□□□□ -1.87
TTC39C-203ENST00000540918 SPRR2AP35326 72 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms