RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 FCGBPQ9Y6R7 5405 aaPredicted RBP4.86□□□□□ -1.63
CDCA3-208ENST00000540683 PRAC1Q96KF2 57 aa4.85□□□□□ -1.63
CDCA3-208ENST00000540683 LOC101927531A0A1B0GV80 90 aa4.84□□□□□ -1.63
CDCA3-208ENST00000540683 FAM240AA0A1B0GVK7 77 aa4.84□□□□□ -1.63
CDCA3-208ENST00000540683 C5orf47Q569G3 176 aa4.84□□□□□ -1.63
CDCA3-208ENST00000540683 TRAV22A0A0B4J277 110 aa4.83□□□□□ -1.64
CDCA3-208ENST00000540683 ATOX1O00244 68 aa4.83□□□□□ -1.64
CDCA3-208ENST00000540683 KRTAP4-7Q9BYR0 210 aa4.83□□□□□ -1.64
CDCA3-208ENST00000540683 CYP4F30PQ9H0H9 118 aa4.8□□□□□ -1.64
CDCA3-208ENST00000540683 UQCRQO14949 82 aa4.79□□□□□ -1.64
CDCA3-208ENST00000540683 SEC61GP60059 68 aa4.79□□□□□ -1.64
CDCA3-208ENST00000540683 LCA10Q71F78 164 aa4.79□□□□□ -1.64
CDCA3-208ENST00000540683 HIST1H4AP62805 103 aaKnown RBP4.78□□□□□ -1.64
CDCA3-208ENST00000540683 CRIPTQ9P021 101 aa4.77□□□□□ -1.65
CDCA3-208ENST00000540683 Q5VV11 94 aa4.75□□□□□ -1.65
CDCA3-208ENST00000540683 A8MUN3 132 aa4.74□□□□□ -1.65
CDCA3-208ENST00000540683 NDUFC1O43677 76 aa4.74□□□□□ -1.65
CDCA3-208ENST00000540683 IMUPQ9GZP8 106 aa4.74□□□□□ -1.65
CDCA3-208ENST00000540683 KLKP1Q107X0 134 aa4.73□□□□□ -1.65
CDCA3-208ENST00000540683 LINC00643Q86TS7 51 aa4.73□□□□□ -1.65
CDCA3-208ENST00000540683 H0Y9P7 68 aa4.72□□□□□ -1.65
CDCA3-208ENST00000540683 SPRR2GQ9BYE4 73 aa4.72□□□□□ -1.65
CDCA3-208ENST00000540683 A0A1B0GV90 55 aa4.71□□□□□ -1.66
CDCA3-208ENST00000540683 MACF1Q9UPN3 7388 aaKnown RBP4.71□□□□□ -1.66
CDCA3-208ENST00000540683 MP68P56378 58 aa4.7□□□□□ -1.66
CDCA3-208ENST00000540683 A6NN06 94 aa4.69□□□□□ -1.66
CDCA3-208ENST00000540683 J3QR89 54 aa4.69□□□□□ -1.66
CDCA3-208ENST00000540683 KRTAP4-2Q9BYR5 136 aa4.68□□□□□ -1.66
CDCA3-208ENST00000540683 H0YAA0 97 aa4.67□□□□□ -1.66
CDCA3-208ENST00000540683 KRTAP19-8Q3LI54 63 aa4.66□□□□□ -1.66
CDCA3-208ENST00000540683 KRTAP6-3Q3LI67 103 aa4.66□□□□□ -1.66
CDCA3-208ENST00000540683 LCE1DQ5T752 114 aa4.66□□□□□ -1.66
CDCA3-208ENST00000540683 SYNE2Q8WXH0 6885 aaKnown RBP4.66□□□□□ -1.66
CDCA3-208ENST00000540683 H3BPC8 53 aa4.65□□□□□ -1.67
CDCA3-208ENST00000540683 LINC00208Q96KT6 92 aa4.64□□□□□ -1.67
CDCA3-208ENST00000540683 LCE5AQ5TCM9 118 aa4.63□□□□□ -1.67
CDCA3-208ENST00000540683 C20orf197Q8N268 126 aa4.63□□□□□ -1.67
CDCA3-208ENST00000540683 OCR1Q9BZK8 76 aa4.63□□□□□ -1.67
CDCA3-208ENST00000540683 KRTAP4-9Q9BYQ8 210 aa4.62□□□□□ -1.67
CDCA3-208ENST00000540683 A0A087WVE0 104 aa4.6□□□□□ -1.67
CDCA3-208ENST00000540683 MT1BP07438 61 aa4.6□□□□□ -1.67
CDCA3-208ENST00000540683 SCGB1A1P11684 91 aa4.6□□□□□ -1.67
CDCA3-208ENST00000540683 KRTAP10-5P60370 271 aa4.58□□□□□ -1.68
CDCA3-208ENST00000540683 PRO2289Q9P1D8 64 aa4.56□□□□□ -1.68
CDCA3-208ENST00000540683 ADM2Q7Z4H4 148 aa4.55□□□□□ -1.68
CDCA3-208ENST00000540683 KRTAP5-3Q6L8H2 238 aa4.53□□□□□ -1.68
CDCA3-208ENST00000540683 SMIM20Q8N5G0 67 aa4.52□□□□□ -1.69
CDCA3-208ENST00000540683 PLAC4Q8WY50 150 aa4.52□□□□□ -1.69
CDCA3-208ENST00000540683 R4GN34 69 aa4.52□□□□□ -1.69
CDCA3-208ENST00000540683 SPTSSBQ8NFR3 76 aa4.51□□□□□ -1.69
CDCA3-208ENST00000540683 DMAC1Q96GE9 116 aa4.51□□□□□ -1.69
CDCA3-208ENST00000540683 TRAV7A0A075B6U4 112 aa4.48□□□□□ -1.69
CDCA3-208ENST00000540683 ACYP2P14621 99 aa4.46□□□□□ -1.7
CDCA3-208ENST00000540683 K7ERU9 68 aa4.45□□□□□ -1.7
CDCA3-208ENST00000540683 M0QZ58 72 aa4.43□□□□□ -1.7
CDCA3-208ENST00000540683 KRTAP5-9P26371 169 aa4.42□□□□□ -1.7
CDCA3-208ENST00000540683 NDUFAF8A1L188 74 aa4.4□□□□□ -1.71
CDCA3-208ENST00000540683 CHKB-CPT1BH3BT56 60 aa4.4□□□□□ -1.71
CDCA3-208ENST00000540683 NEBP20929 6669 aa4.39□□□□□ -1.71
CDCA3-208ENST00000540683 P0C880 135 aa4.37□□□□□ -1.71
CDCA3-208ENST00000540683 KRTAP4-11Q9BYQ6 195 aa4.37□□□□□ -1.71
CDCA3-208ENST00000540683 MUC12Q9UKN1 5478 aa4.36□□□□□ -1.71
CDCA3-208ENST00000540683 MT-ATP8P03928 68 aa4.35□□□□□ -1.71
CDCA3-208ENST00000540683 LINC01554Q52M75 96 aa4.35□□□□□ -1.71
CDCA3-208ENST00000540683 KRTAP12-2P59991 146 aa4.33□□□□□ -1.72
CDCA3-208ENST00000540683 MT1XP80297 61 aa4.33□□□□□ -1.72
CDCA3-208ENST00000540683 KRTAP20-1Q3LI63 56 aa4.33□□□□□ -1.72
CDCA3-208ENST00000540683 SPANXA2-OT1Q8N9U9 137 aa4.31□□□□□ -1.72
CDCA3-208ENST00000540683 KMT2DO14686 5537 aa4.31□□□□□ -1.72
CDCA3-208ENST00000540683 KRTAP8-1Q8IUC2 63 aa4.3□□□□□ -1.72
CDCA3-208ENST00000540683 SPRR2FQ96RM1 72 aa4.29□□□□□ -1.72
CDCA3-208ENST00000540683 MDN1Q9NU22 5596 aa4.27□□□□□ -1.73
CDCA3-208ENST00000540683 SERP2Q8N6R1 65 aa4.25□□□□□ -1.73
CDCA3-208ENST00000540683 SNURFQ9Y675 71 aa4.25□□□□□ -1.73
CDCA3-208ENST00000540683 KRTAP2-3P0C7H8 128 aa4.24□□□□□ -1.73
CDCA3-208ENST00000540683 LCE1AQ5T7P2 110 aa4.24□□□□□ -1.73
CDCA3-208ENST00000540683 KRTAP2-4Q9BYR9 128 aa4.24□□□□□ -1.73
CDCA3-208ENST00000540683 SPRR2EP22531 72 aa4.23□□□□□ -1.73
CDCA3-208ENST00000540683 SPRR2BP35325 72 aa4.23□□□□□ -1.73
CDCA3-208ENST00000540683 SPRR2AP35326 72 aa4.23□□□□□ -1.73
CDCA3-208ENST00000540683 SERP1Q9Y6X1 66 aa4.18□□□□□ -1.74
CDCA3-208ENST00000540683 CAMK2N1Q7Z7J9 78 aa4.17□□□□□ -1.74
CDCA3-208ENST00000540683 KRTAP10-12P60413 245 aa4.16□□□□□ -1.74
CDCA3-208ENST00000540683 V9GYY9 64 aa4.13□□□□□ -1.75
CDCA3-208ENST00000540683 COA5Q86WW8 74 aa4.12□□□□□ -1.75
CDCA3-208ENST00000540683 SPRR2DP22532 72 aa4.11□□□□□ -1.75
CDCA3-208ENST00000540683 KRTAP10-7P60409 375 aaPredicted RBP4.1□□□□□ -1.75
CDCA3-208ENST00000540683 KRTAP2-2Q9BYT5 123 aa4.1□□□□□ -1.75
CDCA3-208ENST00000540683 KRTAP2-1Q9BYU5 128 aa4.1□□□□□ -1.75
CDCA3-208ENST00000540683 COX7CP15954 63 aa4.09□□□□□ -1.75
CDCA3-208ENST00000540683 MT3P25713 68 aa4.09□□□□□ -1.75
CDCA3-208ENST00000540683 A0A1B0GU33 70 aa4.04□□□□□ -1.76
CDCA3-208ENST00000540683 KRTAP13-4Q3LI77 160 aa4.02□□□□□ -1.77
CDCA3-208ENST00000540683 ANAPC13Q9BS18 74 aa4.02□□□□□ -1.77
CDCA3-208ENST00000540683 SMIM26A0A096LP01 95 aa4□□□□□ -1.77
CDCA3-208ENST00000540683 A0A0D9SG42 100 aa3.99□□□□□ -1.77
CDCA3-208ENST00000540683 A0A1B0GU69 56 aa3.99□□□□□ -1.77
CDCA3-208ENST00000540683 H7BZZ5 65 aa3.99□□□□□ -1.77
CDCA3-208ENST00000540683 SPINT4Q6UDR6 99 aa3.98□□□□□ -1.77
CDCA3-208ENST00000540683 CYSTM1Q9H1C7 97 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms