RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 V9GYY9 64 aa4.86□□□□□ -1.63
PAAF1-209ENST00000540659 MUC2Q02817 5179 aa4.85□□□□□ -1.63
PAAF1-209ENST00000540659 PRR15LQ9BU68 103 aa4.85□□□□□ -1.63
PAAF1-209ENST00000540659 KRTAP4-1Q9BYQ7 146 aa4.83□□□□□ -1.64
PAAF1-209ENST00000540659 LINC01558Q9Y6Z2 57 aa4.83□□□□□ -1.64
PAAF1-209ENST00000540659 S4R3F8 94 aa4.81□□□□□ -1.64
PAAF1-209ENST00000540659 H1FX-AS1Q4G0G2 97 aa4.79□□□□□ -1.64
PAAF1-209ENST00000540659 LCA10Q71F78 164 aa4.79□□□□□ -1.64
PAAF1-209ENST00000540659 Q5VV11 94 aa4.78□□□□□ -1.64
PAAF1-209ENST00000540659 A0A1B0GU69 56 aa4.77□□□□□ -1.65
PAAF1-209ENST00000540659 SEC61GP60059 68 aa4.74□□□□□ -1.65
PAAF1-209ENST00000540659 KRTAP3-3Q9BYR6 98 aa4.74□□□□□ -1.65
PAAF1-209ENST00000540659 FAT4Q6V0I7 4981 aa4.72□□□□□ -1.65
PAAF1-209ENST00000540659 A6NED7 52 aa4.7□□□□□ -1.66
PAAF1-209ENST00000540659 CSAG1Q6PB30 78 aa4.7□□□□□ -1.66
PAAF1-209ENST00000540659 BRK1Q8WUW1 75 aa4.7□□□□□ -1.66
PAAF1-209ENST00000540659 LCE2AQ5TA79 106 aaPredicted RBP4.67□□□□□ -1.66
PAAF1-209ENST00000540659 KRTAP19-2Q3LHN2 52 aa4.65□□□□□ -1.67
PAAF1-209ENST00000540659 A8MU10 97 aa4.62□□□□□ -1.67
PAAF1-209ENST00000540659 UQCR11O14957 56 aa4.61□□□□□ -1.67
PAAF1-209ENST00000540659 LCE2CQ5TA81 110 aa4.6□□□□□ -1.67
PAAF1-209ENST00000540659 ADM2Q7Z4H4 148 aa4.6□□□□□ -1.67
PAAF1-209ENST00000540659 A0A1B0GU33 70 aa4.59□□□□□ -1.67
PAAF1-209ENST00000540659 CDC42SE1Q9NRR8 79 aa4.59□□□□□ -1.67
PAAF1-209ENST00000540659 H0YAA0 97 aa4.58□□□□□ -1.68
PAAF1-209ENST00000540659 MIR22HGQ0VDD5 57 aa4.58□□□□□ -1.68
PAAF1-209ENST00000540659 FLGP20930 4061 aaPredicted RBP4.57□□□□□ -1.68
PAAF1-209ENST00000540659 KRTAP10-6P60371 365 aaPredicted RBP4.57□□□□□ -1.68
PAAF1-209ENST00000540659 KRTAP3-2Q9BYR7 98 aa4.57□□□□□ -1.68
PAAF1-209ENST00000540659 P0C880 135 aa4.56□□□□□ -1.68
PAAF1-209ENST00000540659 M0R2T5 61 aa4.55□□□□□ -1.68
PAAF1-209ENST00000540659 SPATA8Q6RVD6 105 aa4.55□□□□□ -1.68
PAAF1-209ENST00000540659 PRO0628Q9UI54 55 aa4.55□□□□□ -1.68
PAAF1-209ENST00000540659 MT1HP80294 61 aa4.54□□□□□ -1.68
PAAF1-209ENST00000540659 KRTAP13-4Q3LI77 160 aa4.49□□□□□ -1.69
PAAF1-209ENST00000540659 CRIPTQ9P021 101 aa4.49□□□□□ -1.69
PAAF1-209ENST00000540659 A0A0D9SG42 100 aa4.46□□□□□ -1.7
PAAF1-209ENST00000540659 M0QZ58 72 aa4.46□□□□□ -1.7
PAAF1-209ENST00000540659 KRTAP9-2Q9BYQ4 174 aa4.46□□□□□ -1.7
PAAF1-209ENST00000540659 LORP23490 312 aaPredicted RBP4.45□□□□□ -1.7
PAAF1-209ENST00000540659 PMAIP1Q13794 54 aa4.42□□□□□ -1.7
PAAF1-209ENST00000540659 R4GN34 69 aa4.42□□□□□ -1.7
PAAF1-209ENST00000540659 K7ERS5 55 aa4.41□□□□□ -1.7
PAAF1-209ENST00000540659 LINC01554Q52M75 96 aa4.39□□□□□ -1.71
PAAF1-209ENST00000540659 A6NN06 94 aa4.37□□□□□ -1.71
PAAF1-209ENST00000540659 LCE2DQ5TA82 110 aaPredicted RBP4.37□□□□□ -1.71
PAAF1-209ENST00000540659 SPINT4Q6UDR6 99 aa4.36□□□□□ -1.71
PAAF1-209ENST00000540659 KRTAP12-2P59991 146 aa4.32□□□□□ -1.72
PAAF1-209ENST00000540659 KRTAP12-1P59990 96 aa4.31□□□□□ -1.72
PAAF1-209ENST00000540659 KRTAP9-8Q9BYQ0 159 aa4.31□□□□□ -1.72
PAAF1-209ENST00000540659 MT2AP02795 61 aa4.3□□□□□ -1.72
PAAF1-209ENST00000540659 KRTAP10-10P60014 251 aa4.3□□□□□ -1.72
PAAF1-209ENST00000540659 MT1FP04733 61 aa4.29□□□□□ -1.72
PAAF1-209ENST00000540659 KRTAP9-6A0A140TA67 174 aa4.27□□□□□ -1.73
PAAF1-209ENST00000540659 SVIPQ8NHG7 77 aa4.25□□□□□ -1.73
PAAF1-209ENST00000540659 KTN1-AS1Q86SY8 53 aa4.24□□□□□ -1.73
PAAF1-209ENST00000540659 CRCT1Q9UGL9 99 aa4.22□□□□□ -1.73
PAAF1-209ENST00000540659 PLAC4Q8WY50 150 aa4.21□□□□□ -1.74
PAAF1-209ENST00000540659 SPRR2GQ9BYE4 73 aa4.21□□□□□ -1.74
PAAF1-209ENST00000540659 KRTAP19-1Q8IUB9 90 aa4.2□□□□□ -1.74
PAAF1-209ENST00000540659 ROMO1P60602 79 aa4.19□□□□□ -1.74
PAAF1-209ENST00000540659 PRAC1Q96KF2 57 aa4.18□□□□□ -1.74
PAAF1-209ENST00000540659 USH2AO75445 5202 aa4.18□□□□□ -1.74
PAAF1-209ENST00000540659 KRTAP9-3Q9BYQ3 159 aa4.17□□□□□ -1.74
PAAF1-209ENST00000540659 FSIP2Q5CZC0 6907 aa4.17□□□□□ -1.74
PAAF1-209ENST00000540659 CAMK2N1Q7Z7J9 78 aa4.16□□□□□ -1.74
PAAF1-209ENST00000540659 LCE2BO14633 110 aa4.14□□□□□ -1.75
PAAF1-209ENST00000540659 SSPOA2VEC9 5147 aa4.09□□□□□ -1.76
PAAF1-209ENST00000540659 KRTAP19-8Q3LI54 63 aa4.08□□□□□ -1.76
PAAF1-209ENST00000540659 C10orf95Q9H7T3 257 aa4.08□□□□□ -1.76
PAAF1-209ENST00000540659 PRO2289Q9P1D8 64 aa4.07□□□□□ -1.76
PAAF1-209ENST00000540659 MT1BP07438 61 aa4.05□□□□□ -1.76
PAAF1-209ENST00000540659 FCGBPQ9Y6R7 5405 aaPredicted RBP4.03□□□□□ -1.76
PAAF1-209ENST00000540659 KRTAP25-1Q3LHN0 102 aa4.02□□□□□ -1.77
PAAF1-209ENST00000540659 KRTAP19-6Q3LI70 58 aa3.97□□□□□ -1.77
PAAF1-209ENST00000540659 TNP1P09430 55 aa3.95□□□□□ -1.78
PAAF1-209ENST00000540659 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.94□□□□□ -1.78
PAAF1-209ENST00000540659 KRTAP10-5P60370 271 aa3.94□□□□□ -1.78
PAAF1-209ENST00000540659 MT1XP80297 61 aa3.93□□□□□ -1.78
PAAF1-209ENST00000540659 PP632Q6XCG6 107 aa3.89□□□□□ -1.79
PAAF1-209ENST00000540659 KRTAP23-1A1A580 65 aa3.87□□□□□ -1.79
PAAF1-209ENST00000540659 KRTAP9-7A8MTY7 169 aa3.86□□□□□ -1.79
PAAF1-209ENST00000540659 KRTAP10-7P60409 375 aaPredicted RBP3.81□□□□□ -1.8
PAAF1-209ENST00000540659 MACF1Q9UPN3 7388 aaKnown RBP3.8□□□□□ -1.8
PAAF1-209ENST00000540659 LCE3AQ5TA76 89 aa3.79□□□□□ -1.8
PAAF1-209ENST00000540659 KRTAP10-12P60413 245 aa3.76□□□□□ -1.81
PAAF1-209ENST00000540659 SYNE2Q8WXH0 6885 aaKnown RBP3.69□□□□□ -1.82
PAAF1-209ENST00000540659 KRTAP6-3Q3LI67 103 aa3.69□□□□□ -1.82
PAAF1-209ENST00000540659 KRTAP4-8A0A0G2JLE6 195 aa3.66□□□□□ -1.82
PAAF1-209ENST00000540659 KRTAP4-8Q9BYQ9 185 aa3.66□□□□□ -1.82
PAAF1-209ENST00000540659 KRTAP8-1Q8IUC2 63 aa3.64□□□□□ -1.83
PAAF1-209ENST00000540659 KMT2DO14686 5537 aa3.62□□□□□ -1.83
PAAF1-209ENST00000540659 KRTAP19-4Q3LI73 84 aa3.61□□□□□ -1.83
PAAF1-209ENST00000540659 KRTAP12-3P60328 96 aa3.6□□□□□ -1.83
PAAF1-209ENST00000540659 MUC12Q9UKN1 5478 aa3.59□□□□□ -1.83
PAAF1-209ENST00000540659 KRTAP19-5Q3LI72 72 aa3.59□□□□□ -1.83
PAAF1-209ENST00000540659 KRTAP5-9P26371 169 aa3.58□□□□□ -1.84
PAAF1-209ENST00000540659 MDN1Q9NU22 5596 aa3.56□□□□□ -1.84
PAAF1-209ENST00000540659 KRTAP15-1Q3LI76 137 aa3.56□□□□□ -1.84
PAAF1-209ENST00000540659 NEBP20929 6669 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms