RNA–Protein interactions for RNA: ENST00000540585.1

NHLRC4-202, Transcript of NHL repeat containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLRC4, Length 2,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC4-202ENST00000540585 TNXBP22105 4242 aa12.17□□□□□ -0.46
NHLRC4-202ENST00000540585 RETNLBQ9BQ08 111 aa12.12□□□□□ -0.47
NHLRC4-202ENST00000540585 CSAG1Q6PB30 78 aa12.07□□□□□ -0.48
NHLRC4-202ENST00000540585 J3QL48 77 aa12.05□□□□□ -0.48
NHLRC4-202ENST00000540585 H3BS24 57 aa12.04□□□□□ -0.48
NHLRC4-202ENST00000540585 C9orf92A6NGG3 77 aa11.96□□□□□ -0.49
NHLRC4-202ENST00000540585 DMBT1Q9UGM3 2413 aaPredicted RBP11.95□□□□□ -0.5
NHLRC4-202ENST00000540585 IGKV2D-30A0A075B6S6 120 aa11.93□□□□□ -0.5
NHLRC4-202ENST00000540585 C20orf166-AS1Q96NR2 134 aa11.89□□□□□ -0.51
NHLRC4-202ENST00000540585 A8MUU9 505 aa11.88□□□□□ -0.51
NHLRC4-202ENST00000540585 HERC1Q15751 4861 aa11.82□□□□□ -0.52
NHLRC4-202ENST00000540585 KRTAP25-1Q3LHN0 102 aa11.74□□□□□ -0.53
NHLRC4-202ENST00000540585 H0YAA0 97 aa11.71□□□□□ -0.54
NHLRC4-202ENST00000540585 ROMO1P60602 79 aa11.62□□□□□ -0.55
NHLRC4-202ENST00000540585 HMCN2Q8NDA2 5059 aa11.57□□□□□ -0.56
NHLRC4-202ENST00000540585 XP32Q5T750 250 aa11.53□□□□□ -0.56
NHLRC4-202ENST00000540585 RPL37P61927 97 aaKnown RBP11.53□□□□□ -0.56
NHLRC4-202ENST00000540585 A0A1B0GU33 70 aa11.52□□□□□ -0.57
NHLRC4-202ENST00000540585 H1FX-AS1Q4G0G2 97 aa11.48□□□□□ -0.57
NHLRC4-202ENST00000540585 LPAP08519 4548 aa11.45□□□□□ -0.58
NHLRC4-202ENST00000540585 TPRXLQ17RH7 258 aa11.44□□□□□ -0.58
NHLRC4-202ENST00000540585 KRTAP3-1Q9BYR8 98 aa11.41□□□□□ -0.58
NHLRC4-202ENST00000540585 LRP2P98164 4655 aa11.37□□□□□ -0.59
NHLRC4-202ENST00000540585 COX6B2Q6YFQ2 88 aa11.34□□□□□ -0.59
NHLRC4-202ENST00000540585 K7ERS5 55 aa11.32□□□□□ -0.6
NHLRC4-202ENST00000540585 P0C880 135 aa11.28□□□□□ -0.6
NHLRC4-202ENST00000540585 CRIPTQ9P021 101 aa11.18□□□□□ -0.62
NHLRC4-202ENST00000540585 UBR4Q5T4S7 5183 aa11.09□□□□□ -0.63
NHLRC4-202ENST00000540585 SEC61BP60468 96 aaKnown RBP11.05□□□□□ -0.64
NHLRC4-202ENST00000540585 MUC17Q685J3 4493 aa11.05□□□□□ -0.64
NHLRC4-202ENST00000540585 S4R3F8 94 aa10.98□□□□□ -0.65
NHLRC4-202ENST00000540585 KRTAP3-3Q9BYR6 98 aa10.97□□□□□ -0.65
NHLRC4-202ENST00000540585 KRTAP10-6P60371 365 aaPredicted RBP10.96□□□□□ -0.65
NHLRC4-202ENST00000540585 RNF213Q63HN8 5207 aa10.94□□□□□ -0.66
NHLRC4-202ENST00000540585 SPINT4Q6UDR6 99 aa10.93□□□□□ -0.66
NHLRC4-202ENST00000540585 KRTAP4-1Q9BYQ7 146 aa10.9□□□□□ -0.66
NHLRC4-202ENST00000540585 KRTAP13-4Q3LI77 160 aa10.89□□□□□ -0.67
NHLRC4-202ENST00000540585 KRTAP15-1Q3LI76 137 aa10.88□□□□□ -0.67
NHLRC4-202ENST00000540585 KRTAP3-2Q9BYR7 98 aa10.84□□□□□ -0.67
NHLRC4-202ENST00000540585 MUC2Q02817 5179 aa10.84□□□□□ -0.67
NHLRC4-202ENST00000540585 A0A0D9SG42 100 aa10.77□□□□□ -0.69
NHLRC4-202ENST00000540585 C10orf95Q9H7T3 257 aa10.75□□□□□ -0.69
NHLRC4-202ENST00000540585 NDUFAF8A1L188 74 aa10.73□□□□□ -0.69
NHLRC4-202ENST00000540585 KRTAP12-2P59991 146 aa10.59□□□□□ -0.71
NHLRC4-202ENST00000540585 KRTAP19-2Q3LHN2 52 aa10.56□□□□□ -0.72
NHLRC4-202ENST00000540585 KRTAP12-1P59990 96 aa10.51□□□□□ -0.73
NHLRC4-202ENST00000540585 FAT4Q6V0I7 4981 aa10.5□□□□□ -0.73
NHLRC4-202ENST00000540585 LCE2CQ5TA81 110 aa10.48□□□□□ -0.73
NHLRC4-202ENST00000540585 M0QZ58 72 aa10.32□□□□□ -0.76
NHLRC4-202ENST00000540585 FLGP20930 4061 aaPredicted RBP10.31□□□□□ -0.76
NHLRC4-202ENST00000540585 MT1HP80294 61 aa10.29□□□□□ -0.76
NHLRC4-202ENST00000540585 LCE2AQ5TA79 106 aaPredicted RBP10.24□□□□□ -0.77
NHLRC4-202ENST00000540585 R4GN34 69 aa10.13□□□□□ -0.79
NHLRC4-202ENST00000540585 M0R2T5 61 aa10.11□□□□□ -0.79
NHLRC4-202ENST00000540585 LORP23490 312 aaPredicted RBP10.09□□□□□ -0.79
NHLRC4-202ENST00000540585 PLAC4Q8WY50 150 aa10.05□□□□□ -0.8
NHLRC4-202ENST00000540585 A0A0A0MQY5 61 aa10□□□□□ -0.81
NHLRC4-202ENST00000540585 LUZP6Q538Z0 58 aa9.92□□□□□ -0.82
NHLRC4-202ENST00000540585 KRTAP9-8Q9BYQ0 159 aa9.84□□□□□ -0.83
NHLRC4-202ENST00000540585 MT2AP02795 61 aa9.76□□□□□ -0.85
NHLRC4-202ENST00000540585 PP632Q6XCG6 107 aa9.76□□□□□ -0.85
NHLRC4-202ENST00000540585 MT1FP04733 61 aa9.7□□□□□ -0.86
NHLRC4-202ENST00000540585 KRTAP10-10P60014 251 aa9.65□□□□□ -0.87
NHLRC4-202ENST00000540585 SPRR2GQ9BYE4 73 aa9.56□□□□□ -0.88
NHLRC4-202ENST00000540585 CAMK2N1Q7Z7J9 78 aa9.55□□□□□ -0.88
NHLRC4-202ENST00000540585 KRTAP19-1Q8IUB9 90 aa9.51□□□□□ -0.89
NHLRC4-202ENST00000540585 KRTAP9-3Q9BYQ3 159 aa9.51□□□□□ -0.89
NHLRC4-202ENST00000540585 LCE2DQ5TA82 110 aaPredicted RBP9.46□□□□□ -0.89
NHLRC4-202ENST00000540585 SPRR5A0A1B0GTR4 108 aa9.4□□□□□ -0.9
NHLRC4-202ENST00000540585 KRTAP23-1A1A580 65 aa9.37□□□□□ -0.91
NHLRC4-202ENST00000540585 KRTAP9-2Q9BYQ4 174 aa9.37□□□□□ -0.91
NHLRC4-202ENST00000540585 LCE2BO14633 110 aa9.33□□□□□ -0.92
NHLRC4-202ENST00000540585 KRTAP19-8Q3LI54 63 aa9.23□□□□□ -0.93
NHLRC4-202ENST00000540585 USH2AO75445 5202 aa9.21□□□□□ -0.93
NHLRC4-202ENST00000540585 TNP1P09430 55 aa9.19□□□□□ -0.94
NHLRC4-202ENST00000540585 MT1BP07438 61 aa9.11□□□□□ -0.95
NHLRC4-202ENST00000540585 FSIP2Q5CZC0 6907 aa9.1□□□□□ -0.95
NHLRC4-202ENST00000540585 SSPOA2VEC9 5147 aa9□□□□□ -0.97
NHLRC4-202ENST00000540585 CRCT1Q9UGL9 99 aa8.95□□□□□ -0.98
NHLRC4-202ENST00000540585 MT1XP80297 61 aa8.92□□□□□ -0.98
NHLRC4-202ENST00000540585 PRO2289Q9P1D8 64 aa8.92□□□□□ -0.98
NHLRC4-202ENST00000540585 KRTAP10-5P60370 271 aa8.91□□□□□ -0.98
NHLRC4-202ENST00000540585 KRTAP19-6Q3LI70 58 aa8.86□□□□□ -0.99
NHLRC4-202ENST00000540585 KRTAP9-6A0A140TA67 174 aa8.82□□□□□ -1
NHLRC4-202ENST00000540585 INE1O15225 51 aa8.75□□□□□ -1.01
NHLRC4-202ENST00000540585 LCE3AQ5TA76 89 aa8.71□□□□□ -1.01
NHLRC4-202ENST00000540585 FCGBPQ9Y6R7 5405 aaPredicted RBP8.71□□□□□ -1.01
NHLRC4-202ENST00000540585 KRTAP10-7P60409 375 aaPredicted RBP8.6□□□□□ -1.03
NHLRC4-202ENST00000540585 KRTAP10-12P60413 245 aa8.6□□□□□ -1.03
NHLRC4-202ENST00000540585 KRTAP8-1Q8IUC2 63 aa8.52□□□□□ -1.05
NHLRC4-202ENST00000540585 KRTAP12-3P60328 96 aa8.34□□□□□ -1.07
NHLRC4-202ENST00000540585 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.32□□□□□ -1.08
NHLRC4-202ENST00000540585 MACF1Q9UPN3 7388 aaKnown RBP8.3□□□□□ -1.08
NHLRC4-202ENST00000540585 KRTAP19-5Q3LI72 72 aa8.16□□□□□ -1.1
NHLRC4-202ENST00000540585 KRTAP4-8A0A0G2JLE6 195 aa8.15□□□□□ -1.1
NHLRC4-202ENST00000540585 KRTAP4-8Q9BYQ9 185 aa8.15□□□□□ -1.1
NHLRC4-202ENST00000540585 KMT2DO14686 5537 aa8.15□□□□□ -1.11
NHLRC4-202ENST00000540585 SYNE2Q8WXH0 6885 aaKnown RBP8.06□□□□□ -1.12
NHLRC4-202ENST00000540585 KRTAP9-7A8MTY7 169 aa8.01□□□□□ -1.13
NHLRC4-202ENST00000540585 KRTAP6-3Q3LI67 103 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms