RNA–Protein interactions for RNA: ENST00000540394.5

C1R-206, Transcript of complement C1r, humanhuman

TSL 2

Gene C1R, Length 3,501 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1R-206ENST00000540394 LPAP08519 4548 aa6.42□□□□□ -1.38
C1R-206ENST00000540394 MMP24-AS1A0A0U1RRL7 71 aa6.42□□□□□ -1.38
C1R-206ENST00000540394 KRTAP29-1A8MX34 341 aaPredicted RBP6.41□□□□□ -1.38
C1R-206ENST00000540394 KRTAP25-1Q3LHN0 102 aa6.41□□□□□ -1.38
C1R-206ENST00000540394 A0A1B0GVX0 72 aa6.4□□□□□ -1.39
C1R-206ENST00000540394 A8MUU9 505 aa6.38□□□□□ -1.39
C1R-206ENST00000540394 RPS29P62273 56 aaKnown RBP6.38□□□□□ -1.39
C1R-206ENST00000540394 HERC1Q15751 4861 aa6.35□□□□□ -1.39
C1R-206ENST00000540394 A0A1B0GU69 56 aa6.34□□□□□ -1.39
C1R-206ENST00000540394 LRP2P98164 4655 aa6.31□□□□□ -1.4
C1R-206ENST00000540394 IGLV7-46A0A075B6I9 117 aa6.28□□□□□ -1.4
C1R-206ENST00000540394 HRES1P13985 223 aa6.28□□□□□ -1.4
C1R-206ENST00000540394 C9orf92A6NGG3 77 aa6.28□□□□□ -1.4
C1R-206ENST00000540394 SPATA8Q6RVD6 105 aa6.27□□□□□ -1.41
C1R-206ENST00000540394 MRPL34Q9BQ48 92 aaKnown RBP6.27□□□□□ -1.41
C1R-206ENST00000540394 UQCR11O14957 56 aa6.26□□□□□ -1.41
C1R-206ENST00000540394 Q5W150 140 aa6.25□□□□□ -1.41
C1R-206ENST00000540394 KRTAP13-3Q3SY46 172 aa6.22□□□□□ -1.41
C1R-206ENST00000540394 H3BPC8 53 aa6.18□□□□□ -1.42
C1R-206ENST00000540394 HMCN2Q8NDA2 5059 aa6.17□□□□□ -1.42
C1R-206ENST00000540394 DMAC1Q96GE9 116 aa6.14□□□□□ -1.43
C1R-206ENST00000540394 MUC2Q02817 5179 aa6.13□□□□□ -1.43
C1R-206ENST00000540394 TP53AIP1Q9HCN2 124 aa6.13□□□□□ -1.43
C1R-206ENST00000540394 XP32Q5T750 250 aa6.13□□□□□ -1.43
C1R-206ENST00000540394 TPRXLQ17RH7 258 aa6.05□□□□□ -1.44
C1R-206ENST00000540394 MUC17Q685J3 4493 aa6.05□□□□□ -1.44
C1R-206ENST00000540394 RPL37P61927 97 aaKnown RBP6.03□□□□□ -1.44
C1R-206ENST00000540394 IGKV2-30P06310 120 aa6.02□□□□□ -1.45
C1R-206ENST00000540394 KRTAP15-1Q3LI76 137 aa6.01□□□□□ -1.45
C1R-206ENST00000540394 IGKV2D-30A0A075B6S6 120 aa6.01□□□□□ -1.45
C1R-206ENST00000540394 UBR4Q5T4S7 5183 aa6□□□□□ -1.45
C1R-206ENST00000540394 ACYP2P14621 99 aa5.99□□□□□ -1.45
C1R-206ENST00000540394 RNF213Q63HN8 5207 aa5.95□□□□□ -1.46
C1R-206ENST00000540394 KRTAP4-1Q9BYQ7 146 aa5.92□□□□□ -1.46
C1R-206ENST00000540394 KRTAP3-1Q9BYR8 98 aa5.89□□□□□ -1.47
C1R-206ENST00000540394 C10orf95Q9H7T3 257 aa5.88□□□□□ -1.47
C1R-206ENST00000540394 FAT4Q6V0I7 4981 aa5.83□□□□□ -1.48
C1R-206ENST00000540394 CAMK2N1Q7Z7J9 78 aa5.82□□□□□ -1.48
C1R-206ENST00000540394 H0YAA0 97 aa5.77□□□□□ -1.49
C1R-206ENST00000540394 FLGP20930 4061 aaPredicted RBP5.76□□□□□ -1.49
C1R-206ENST00000540394 KRTAP19-2Q3LHN2 52 aa5.75□□□□□ -1.49
C1R-206ENST00000540394 COX6B2Q6YFQ2 88 aa5.74□□□□□ -1.49
C1R-206ENST00000540394 KRTAP3-3Q9BYR6 98 aa5.68□□□□□ -1.5
C1R-206ENST00000540394 A0A1B0GU33 70 aa5.64□□□□□ -1.51
C1R-206ENST00000540394 H1FX-AS1Q4G0G2 97 aa5.61□□□□□ -1.51
C1R-206ENST00000540394 LCE2CQ5TA81 110 aa5.61□□□□□ -1.51
C1R-206ENST00000540394 S4R3F8 94 aa5.57□□□□□ -1.52
C1R-206ENST00000540394 R4GN34 69 aa5.55□□□□□ -1.52
C1R-206ENST00000540394 A0A0D9SG42 100 aa5.52□□□□□ -1.53
C1R-206ENST00000540394 KRTAP3-2Q9BYR7 98 aa5.45□□□□□ -1.54
C1R-206ENST00000540394 MT1HP80294 61 aa5.45□□□□□ -1.54
C1R-206ENST00000540394 KRTAP10-6P60371 365 aaPredicted RBP5.44□□□□□ -1.54
C1R-206ENST00000540394 PLAC4Q8WY50 150 aa5.4□□□□□ -1.54
C1R-206ENST00000540394 PRO2289Q9P1D8 64 aa5.39□□□□□ -1.55
C1R-206ENST00000540394 KRTAP23-1A1A580 65 aa5.38□□□□□ -1.55
C1R-206ENST00000540394 LORP23490 312 aaPredicted RBP5.36□□□□□ -1.55
C1R-206ENST00000540394 KRTAP13-4Q3LI77 160 aa5.34□□□□□ -1.55
C1R-206ENST00000540394 M0R2T5 61 aa5.27□□□□□ -1.57
C1R-206ENST00000540394 KRTAP9-8Q9BYQ0 159 aa5.27□□□□□ -1.57
C1R-206ENST00000540394 LCE2AQ5TA79 106 aaPredicted RBP5.26□□□□□ -1.57
C1R-206ENST00000540394 MT2AP02795 61 aa5.22□□□□□ -1.57
C1R-206ENST00000540394 MT1FP04733 61 aa5.22□□□□□ -1.57
C1R-206ENST00000540394 M0QZ58 72 aa5.14□□□□□ -1.59
C1R-206ENST00000540394 KRTAP19-1Q8IUB9 90 aa5.12□□□□□ -1.59
C1R-206ENST00000540394 USH2AO75445 5202 aa5.11□□□□□ -1.59
C1R-206ENST00000540394 KRTAP10-10P60014 251 aa5.1□□□□□ -1.59
C1R-206ENST00000540394 KRTAP12-2P59991 146 aa5.08□□□□□ -1.6
C1R-206ENST00000540394 SPRR2GQ9BYE4 73 aa5.06□□□□□ -1.6
C1R-206ENST00000540394 KRTAP9-3Q9BYQ3 159 aa5.06□□□□□ -1.6
C1R-206ENST00000540394 KRTAP12-1P59990 96 aa5.05□□□□□ -1.6
C1R-206ENST00000540394 LCE2BO14633 110 aa4.97□□□□□ -1.61
C1R-206ENST00000540394 FSIP2Q5CZC0 6907 aa4.96□□□□□ -1.62
C1R-206ENST00000540394 MT1BP07438 61 aa4.93□□□□□ -1.62
C1R-206ENST00000540394 INE1O15225 51 aa4.93□□□□□ -1.62
C1R-206ENST00000540394 KRTAP19-8Q3LI54 63 aa4.92□□□□□ -1.62
C1R-206ENST00000540394 SSPOA2VEC9 5147 aa4.85□□□□□ -1.63
C1R-206ENST00000540394 MT1XP80297 61 aa4.77□□□□□ -1.65
C1R-206ENST00000540394 KRTAP10-5P60370 271 aa4.76□□□□□ -1.65
C1R-206ENST00000540394 PP632Q6XCG6 107 aa4.75□□□□□ -1.65
C1R-206ENST00000540394 KMT2DO14686 5537 aa4.73□□□□□ -1.65
C1R-206ENST00000540394 LCE2DQ5TA82 110 aaPredicted RBP4.68□□□□□ -1.66
C1R-206ENST00000540394 KRTAP10-7P60409 375 aaPredicted RBP4.61□□□□□ -1.67
C1R-206ENST00000540394 FCGBPQ9Y6R7 5405 aaPredicted RBP4.61□□□□□ -1.67
C1R-206ENST00000540394 KRTAP9-2Q9BYQ4 174 aa4.59□□□□□ -1.68
C1R-206ENST00000540394 KRTAP19-6Q3LI70 58 aa4.57□□□□□ -1.68
C1R-206ENST00000540394 TNP1P09430 55 aa4.51□□□□□ -1.69
C1R-206ENST00000540394 KRTAP10-12P60413 245 aa4.47□□□□□ -1.69
C1R-206ENST00000540394 KRTAP4-8A0A0G2JLE6 195 aa4.47□□□□□ -1.69
C1R-206ENST00000540394 KRTAP4-8Q9BYQ9 185 aa4.47□□□□□ -1.69
C1R-206ENST00000540394 MACF1Q9UPN3 7388 aaKnown RBP4.47□□□□□ -1.69
C1R-206ENST00000540394 LCE3AQ5TA76 89 aa4.47□□□□□ -1.69
C1R-206ENST00000540394 SPRR5A0A1B0GTR4 108 aa4.46□□□□□ -1.69
C1R-206ENST00000540394 SYNE2Q8WXH0 6885 aaKnown RBP4.38□□□□□ -1.71
C1R-206ENST00000540394 CRCT1Q9UGL9 99 aa4.38□□□□□ -1.71
C1R-206ENST00000540394 KRTAP8-1Q8IUC2 63 aa4.32□□□□□ -1.72
C1R-206ENST00000540394 MUC12Q9UKN1 5478 aa4.31□□□□□ -1.72
C1R-206ENST00000540394 KRTAP19-5Q3LI72 72 aa4.29□□□□□ -1.72
C1R-206ENST00000540394 KRTAP19-7Q3SYF9 63 aa4.27□□□□□ -1.73
C1R-206ENST00000540394 KRTAP12-3P60328 96 aa4.23□□□□□ -1.73
C1R-206ENST00000540394 KRTAP9-6A0A140TA67 174 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms