RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 PRLHP81277 87 aa3.4□□□□□ -1.87
CPSF7-219ENST00000539952 CD164Q04900 197 aa3.4□□□□□ -1.87
CPSF7-219ENST00000539952 DEFB116Q30KQ4 102 aa3.4□□□□□ -1.87
CPSF7-219ENST00000539952 KRTAP13-2Q52LG2 175 aa3.4□□□□□ -1.87
CPSF7-219ENST00000539952 Q5VV11 94 aa3.4□□□□□ -1.87
CPSF7-219ENST00000539952 ANAPC11Q9NYG5 84 aa3.4□□□□□ -1.87
CPSF7-219ENST00000539952 LINC01558Q9Y6Z2 57 aa3.4□□□□□ -1.87
CPSF7-219ENST00000539952 MUC17Q685J3 4493 aa3.4□□□□□ -1.87
CPSF7-219ENST00000539952 MMP24-AS1A0A0U1RRL7 71 aa3.39□□□□□ -1.87
CPSF7-219ENST00000539952 KRTAP4-11Q9BYQ6 195 aa3.39□□□□□ -1.87
CPSF7-219ENST00000539952 COA5Q86WW8 74 aa3.38□□□□□ -1.87
CPSF7-219ENST00000539952 PRR15LQ9BU68 103 aa3.38□□□□□ -1.87
CPSF7-219ENST00000539952 SSPOA2VEC9 5147 aa3.38□□□□□ -1.87
CPSF7-219ENST00000539952 C8orf17Q9NRJ1 99 aa3.37□□□□□ -1.87
CPSF7-219ENST00000539952 CDC42SE1Q9NRR8 79 aa3.37□□□□□ -1.87
CPSF7-219ENST00000539952 A0A1B0GVX0 72 aa3.36□□□□□ -1.87
CPSF7-219ENST00000539952 A6NED7 52 aa3.36□□□□□ -1.87
CPSF7-219ENST00000539952 KRTAP13-3Q3SY46 172 aa3.36□□□□□ -1.87
CPSF7-219ENST00000539952 LINC00483Q53H64 154 aa3.36□□□□□ -1.87
CPSF7-219ENST00000539952 KTN1-AS1Q86SY8 53 aa3.36□□□□□ -1.87
CPSF7-219ENST00000539952 KRTAP13-1Q8IUC0 172 aa3.36□□□□□ -1.87
CPSF7-219ENST00000539952 MRPL34Q9BQ48 92 aaKnown RBP3.36□□□□□ -1.87
CPSF7-219ENST00000539952 KRTAP4-1Q9BYQ7 146 aa3.35□□□□□ -1.87
CPSF7-219ENST00000539952 KRTAP4-2Q9BYR5 136 aa3.35□□□□□ -1.87
CPSF7-219ENST00000539952 A0A0G2JQZ4 141 aa3.34□□□□□ -1.87
CPSF7-219ENST00000539952 ACYP2P14621 99 aa3.34□□□□□ -1.87
CPSF7-219ENST00000539952 Q96NJ1 140 aa3.34□□□□□ -1.87
CPSF7-219ENST00000539952 C8orf87E5RJ46 101 aa3.33□□□□□ -1.88
CPSF7-219ENST00000539952 SPINK1P00995 79 aa3.33□□□□□ -1.88
CPSF7-219ENST00000539952 PCOTHQ58A44 107 aa3.32□□□□□ -1.88
CPSF7-219ENST00000539952 SSBP3-AS1Q7Z2R9 100 aa3.32□□□□□ -1.88
CPSF7-219ENST00000539952 SPTSSBQ8NFR3 76 aa3.32□□□□□ -1.88
CPSF7-219ENST00000539952 IGHV6-1A0A0B4J1U7 121 aa3.31□□□□□ -1.88
CPSF7-219ENST00000539952 IGLV9-49A0A0B4J1Y8 123 aa3.31□□□□□ -1.88
CPSF7-219ENST00000539952 LCA10Q71F78 164 aa3.31□□□□□ -1.88
CPSF7-219ENST00000539952 A6NN06 94 aa3.3□□□□□ -1.88
CPSF7-219ENST00000539952 HRES1P13985 223 aa3.3□□□□□ -1.88
CPSF7-219ENST00000539952 MT1HP80294 61 aa3.3□□□□□ -1.88
CPSF7-219ENST00000539952 C7orf65Q6ZTY9 151 aa3.3□□□□□ -1.88
CPSF7-219ENST00000539952 RPS29P62273 56 aaKnown RBP3.29□□□□□ -1.88
CPSF7-219ENST00000539952 SYNE2Q8WXH0 6885 aaKnown RBP3.29□□□□□ -1.88
CPSF7-219ENST00000539952 NEBP20929 6669 aa3.28□□□□□ -1.88
CPSF7-219ENST00000539952 KRTAP10-6P60371 365 aaPredicted RBP3.28□□□□□ -1.88
CPSF7-219ENST00000539952 KRTAP19-2Q3LHN2 52 aa3.28□□□□□ -1.88
CPSF7-219ENST00000539952 M0R2T5 61 aa3.27□□□□□ -1.89
CPSF7-219ENST00000539952 RBM12B-AS1Q9P1G2 102 aa3.26□□□□□ -1.89
CPSF7-219ENST00000539952 LINC00313P59037 77 aa3.25□□□□□ -1.89
CPSF7-219ENST00000539952 KRTAP20-1Q3LI63 56 aa3.25□□□□□ -1.89
CPSF7-219ENST00000539952 DMAC1Q96GE9 116 aa3.25□□□□□ -1.89
CPSF7-219ENST00000539952 A0A1B0GU69 56 aa3.23□□□□□ -1.89
CPSF7-219ENST00000539952 SPINK7P58062 85 aa3.23□□□□□ -1.89
CPSF7-219ENST00000539952 SPATA8Q6RVD6 105 aa3.23□□□□□ -1.89
CPSF7-219ENST00000539952 A8MU10 97 aa3.22□□□□□ -1.89
CPSF7-219ENST00000539952 UQCR11O14957 56 aa3.22□□□□□ -1.89
CPSF7-219ENST00000539952 COX6B2Q6YFQ2 88 aa3.22□□□□□ -1.89
CPSF7-219ENST00000539952 MACF1Q9UPN3 7388 aaKnown RBP3.22□□□□□ -1.89
CPSF7-219ENST00000539952 IGKV2-30P06310 120 aa3.21□□□□□ -1.9
CPSF7-219ENST00000539952 Q5W150 140 aa3.21□□□□□ -1.9
CPSF7-219ENST00000539952 GPR98Q8WXG9 6306 aa3.2□□□□□ -1.9
CPSF7-219ENST00000539952 NOTCH2NLQ7Z3S9 236 aa3.19□□□□□ -1.9
CPSF7-219ENST00000539952 USH2AO75445 5202 aa3.19□□□□□ -1.9
CPSF7-219ENST00000539952 MIR22HGQ0VDD5 57 aa3.18□□□□□ -1.9
CPSF7-219ENST00000539952 FCGBPQ9Y6R7 5405 aaPredicted RBP3.17□□□□□ -1.9
CPSF7-219ENST00000539952 C9orf92A6NGG3 77 aa3.17□□□□□ -1.9
CPSF7-219ENST00000539952 IGKV2D-30A0A075B6S6 120 aa3.15□□□□□ -1.91
CPSF7-219ENST00000539952 KRTAP16-1A8MUX0 517 aa3.13□□□□□ -1.91
CPSF7-219ENST00000539952 RPL37P61927 97 aaKnown RBP3.13□□□□□ -1.91
CPSF7-219ENST00000539952 LINC01554Q52M75 96 aa3.12□□□□□ -1.91
CPSF7-219ENST00000539952 KRTAP9-8Q9BYQ0 159 aa3.1□□□□□ -1.91
CPSF7-219ENST00000539952 KRTAP6-3Q3LI67 103 aa3.08□□□□□ -1.92
CPSF7-219ENST00000539952 K7ERS5 55 aa3.07□□□□□ -1.92
CPSF7-219ENST00000539952 FLGP20930 4061 aaPredicted RBP3.06□□□□□ -1.92
CPSF7-219ENST00000539952 PRAC1Q96KF2 57 aa3.05□□□□□ -1.92
CPSF7-219ENST00000539952 A0A1B0GU33 70 aa3.03□□□□□ -1.92
CPSF7-219ENST00000539952 A8MUU9 505 aa3.03□□□□□ -1.92
CPSF7-219ENST00000539952 CSAG1Q6PB30 78 aa3.02□□□□□ -1.93
CPSF7-219ENST00000539952 C20orf166-AS1Q96NR2 134 aa3.02□□□□□ -1.93
CPSF7-219ENST00000539952 MT2AP02795 61 aa3.01□□□□□ -1.93
CPSF7-219ENST00000539952 KRTAP10-10P60014 251 aa3.01□□□□□ -1.93
CPSF7-219ENST00000539952 ADM2Q7Z4H4 148 aa3.01□□□□□ -1.93
CPSF7-219ENST00000539952 KMT2DO14686 5537 aa3□□□□□ -1.93
CPSF7-219ENST00000539952 MUC12Q9UKN1 5478 aa3□□□□□ -1.93
CPSF7-219ENST00000539952 KRTAP19-6Q3LI70 58 aa3□□□□□ -1.93
CPSF7-219ENST00000539952 H1FX-AS1Q4G0G2 97 aa3□□□□□ -1.93
CPSF7-219ENST00000539952 LCE1AQ5T7P2 110 aa3□□□□□ -1.93
CPSF7-219ENST00000539952 KRTAP25-1Q3LHN0 102 aa2.99□□□□□ -1.93
CPSF7-219ENST00000539952 MT1FP04733 61 aa2.98□□□□□ -1.93
CPSF7-219ENST00000539952 H0YAA0 97 aa2.96□□□□□ -1.94
CPSF7-219ENST00000539952 KRTAP2-3P0C7H8 128 aa2.94□□□□□ -1.94
CPSF7-219ENST00000539952 KRTAP2-4Q9BYR9 128 aa2.94□□□□□ -1.94
CPSF7-219ENST00000539952 ROMO1P60602 79 aa2.92□□□□□ -1.94
CPSF7-219ENST00000539952 KRTAP5-3Q6L8H2 238 aa2.88□□□□□ -1.95
CPSF7-219ENST00000539952 CRIPTQ9P021 101 aa2.85□□□□□ -1.95
CPSF7-219ENST00000539952 S4R3F8 94 aa2.85□□□□□ -1.95
CPSF7-219ENST00000539952 MDN1Q9NU22 5596 aa2.83□□□□□ -1.96
CPSF7-219ENST00000539952 M0QZ58 72 aa2.81□□□□□ -1.96
CPSF7-219ENST00000539952 MT3P25713 68 aa2.8□□□□□ -1.96
CPSF7-219ENST00000539952 SPINT4Q6UDR6 99 aa2.8□□□□□ -1.96
CPSF7-219ENST00000539952 KRTAP2-2Q9BYT5 123 aa2.8□□□□□ -1.96
CPSF7-219ENST00000539952 KRTAP2-1Q9BYU5 128 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms