RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 HCG22E2RYF7 251 aa5.56□□□□□ -1.52
RTN3-209ENST00000538995 IMUPQ9GZP8 106 aa5.56□□□□□ -1.52
RTN3-209ENST00000538995 UQCRQO14949 82 aa5.53□□□□□ -1.52
RTN3-209ENST00000538995 KRTAP5-3Q6L8H2 238 aa5.52□□□□□ -1.53
RTN3-209ENST00000538995 PRO0628Q9UI54 55 aa5.51□□□□□ -1.53
RTN3-209ENST00000538995 FCGBPQ9Y6R7 5405 aaPredicted RBP5.51□□□□□ -1.53
RTN3-209ENST00000538995 FAM240AA0A1B0GVK7 77 aa5.5□□□□□ -1.53
RTN3-209ENST00000538995 SEC61GP60059 68 aa5.5□□□□□ -1.53
RTN3-209ENST00000538995 LCE5AQ5TCM9 118 aa5.49□□□□□ -1.53
RTN3-209ENST00000538995 TMEM258P61165 79 aa5.47□□□□□ -1.53
RTN3-209ENST00000538995 TP53AIP1Q9HCN2 124 aa5.47□□□□□ -1.53
RTN3-209ENST00000538995 V9GYY9 64 aa5.47□□□□□ -1.53
RTN3-209ENST00000538995 ACYP1P07311 99 aa5.46□□□□□ -1.54
RTN3-209ENST00000538995 C4orf26Q17RF5 130 aa5.46□□□□□ -1.54
RTN3-209ENST00000538995 COX7CP15954 63 aa5.43□□□□□ -1.54
RTN3-209ENST00000538995 ATOX1O00244 68 aa5.4□□□□□ -1.54
RTN3-209ENST00000538995 SYNE2Q8WXH0 6885 aaKnown RBP5.39□□□□□ -1.55
RTN3-209ENST00000538995 KRTAP19-6Q3LI70 58 aa5.39□□□□□ -1.55
RTN3-209ENST00000538995 MACF1Q9UPN3 7388 aaKnown RBP5.39□□□□□ -1.55
RTN3-209ENST00000538995 ATP5EP2Q5VTU8 51 aa5.38□□□□□ -1.55
RTN3-209ENST00000538995 LINC00643Q86TS7 51 aa5.38□□□□□ -1.55
RTN3-209ENST00000538995 C1orf64Q8NEQ6 169 aa5.38□□□□□ -1.55
RTN3-209ENST00000538995 KRTAP3-1Q9BYR8 98 aa5.38□□□□□ -1.55
RTN3-209ENST00000538995 S4R3F8 94 aa5.37□□□□□ -1.55
RTN3-209ENST00000538995 TRAV22A0A0B4J277 110 aa5.34□□□□□ -1.55
RTN3-209ENST00000538995 FAM236AA0A1B0GUQ0 79 aa5.34□□□□□ -1.55
RTN3-209ENST00000538995 FAM236BA0A1B0GV22 79 aa5.34□□□□□ -1.55
RTN3-209ENST00000538995 HIST1H4AP62805 103 aaKnown RBP5.33□□□□□ -1.56
RTN3-209ENST00000538995 CSAG1Q6PB30 78 aa5.33□□□□□ -1.56
RTN3-209ENST00000538995 CYP4F30PQ9H0H9 118 aa5.33□□□□□ -1.56
RTN3-209ENST00000538995 LOC101927531A0A1B0GV80 90 aa5.32□□□□□ -1.56
RTN3-209ENST00000538995 LCA10Q71F78 164 aa5.32□□□□□ -1.56
RTN3-209ENST00000538995 SERP2Q8N6R1 65 aa5.31□□□□□ -1.56
RTN3-209ENST00000538995 SERP1Q9Y6X1 66 aa5.31□□□□□ -1.56
RTN3-209ENST00000538995 SMIM26A0A096LP01 95 aa5.3□□□□□ -1.56
RTN3-209ENST00000538995 KRTAP19-4Q3LI73 84 aa5.3□□□□□ -1.56
RTN3-209ENST00000538995 ATP5EP56381 51 aaPredicted RBP5.25□□□□□ -1.57
RTN3-209ENST00000538995 H0Y9P7 68 aa5.23□□□□□ -1.57
RTN3-209ENST00000538995 SPRR2GQ9BYE4 73 aa5.23□□□□□ -1.57
RTN3-209ENST00000538995 KLKP1Q107X0 134 aa5.21□□□□□ -1.58
RTN3-209ENST00000538995 PMAIP1Q13794 54 aa5.21□□□□□ -1.58
RTN3-209ENST00000538995 A0A087WVE0 104 aa5.2□□□□□ -1.58
RTN3-209ENST00000538995 NDUFC1O43677 76 aa5.2□□□□□ -1.58
RTN3-209ENST00000538995 KRTAP19-8Q3LI54 63 aa5.2□□□□□ -1.58
RTN3-209ENST00000538995 Q5VV11 94 aa5.2□□□□□ -1.58
RTN3-209ENST00000538995 A8MUN3 132 aa5.18□□□□□ -1.58
RTN3-209ENST00000538995 MT1BP07438 61 aa5.18□□□□□ -1.58
RTN3-209ENST00000538995 CRIPTQ9P021 101 aa5.18□□□□□ -1.58
RTN3-209ENST00000538995 H0YAA0 97 aa5.15□□□□□ -1.59
RTN3-209ENST00000538995 OCR1Q9BZK8 76 aa5.15□□□□□ -1.59
RTN3-209ENST00000538995 MP68P56378 58 aa5.14□□□□□ -1.59
RTN3-209ENST00000538995 BRK1Q8WUW1 75 aa5.14□□□□□ -1.59
RTN3-209ENST00000538995 LINC00208Q96KT6 92 aa5.14□□□□□ -1.59
RTN3-209ENST00000538995 A6NN06 94 aa5.13□□□□□ -1.59
RTN3-209ENST00000538995 KRTAP6-3Q3LI67 103 aa5.12□□□□□ -1.59
RTN3-209ENST00000538995 CYSTM1Q9H1C7 97 aa5.12□□□□□ -1.59
RTN3-209ENST00000538995 TRAV7A0A075B6U4 112 aa5.1□□□□□ -1.59
RTN3-209ENST00000538995 H7BZZ5 65 aa5.1□□□□□ -1.59
RTN3-209ENST00000538995 NEBP20929 6669 aa5.1□□□□□ -1.59
RTN3-209ENST00000538995 H3BPC8 53 aa5.09□□□□□ -1.59
RTN3-209ENST00000538995 KRTAP10-5P60370 271 aa5.08□□□□□ -1.6
RTN3-209ENST00000538995 MUC12Q9UKN1 5478 aa5.05□□□□□ -1.6
RTN3-209ENST00000538995 C20orf197Q8N268 126 aa5.04□□□□□ -1.6
RTN3-209ENST00000538995 ADM2Q7Z4H4 148 aa5.03□□□□□ -1.6
RTN3-209ENST00000538995 DMAC1Q96GE9 116 aa5.02□□□□□ -1.61
RTN3-209ENST00000538995 Q1T7F1 81 aa5□□□□□ -1.61
RTN3-209ENST00000538995 KTN1-AS1Q86SY8 53 aa4.98□□□□□ -1.61
RTN3-209ENST00000538995 R4GN34 69 aa4.93□□□□□ -1.62
RTN3-209ENST00000538995 PRO2289Q9P1D8 64 aa4.92□□□□□ -1.62
RTN3-209ENST00000538995 P0C880 135 aa4.91□□□□□ -1.62
RTN3-209ENST00000538995 KRTAP23-1A1A580 65 aa4.9□□□□□ -1.63
RTN3-209ENST00000538995 KRTAP5-9P26371 169 aa4.9□□□□□ -1.63
RTN3-209ENST00000538995 PLAC4Q8WY50 150 aa4.89□□□□□ -1.63
RTN3-209ENST00000538995 KMT2DO14686 5537 aa4.88□□□□□ -1.63
RTN3-209ENST00000538995 M0QZ58 72 aa4.87□□□□□ -1.63
RTN3-209ENST00000538995 ACYP2P14621 99 aa4.87□□□□□ -1.63
RTN3-209ENST00000538995 SNURFQ9Y675 71 aa4.87□□□□□ -1.63
RTN3-209ENST00000538995 MT1XP80297 61 aa4.86□□□□□ -1.63
RTN3-209ENST00000538995 MDN1Q9NU22 5596 aa4.86□□□□□ -1.63
RTN3-209ENST00000538995 SPTSSBQ8NFR3 76 aa4.85□□□□□ -1.63
RTN3-209ENST00000538995 KRTAP20-1Q3LI63 56 aa4.81□□□□□ -1.64
RTN3-209ENST00000538995 KRTAP12-2P59991 146 aa4.79□□□□□ -1.64
RTN3-209ENST00000538995 CHKB-CPT1BH3BT56 60 aa4.78□□□□□ -1.64
RTN3-209ENST00000538995 LINC01554Q52M75 96 aa4.78□□□□□ -1.64
RTN3-209ENST00000538995 SPANXA2-OT1Q8N9U9 137 aa4.77□□□□□ -1.65
RTN3-209ENST00000538995 PSPHP1O15172 72 aa4.73□□□□□ -1.65
RTN3-209ENST00000538995 CDC42SE1Q9NRR8 79 aa4.73□□□□□ -1.65
RTN3-209ENST00000538995 KRTAP8-1Q8IUC2 63 aa4.72□□□□□ -1.65
RTN3-209ENST00000538995 SPRR2FQ96RM1 72 aa4.72□□□□□ -1.65
RTN3-209ENST00000538995 A6NED7 52 aa4.65□□□□□ -1.67
RTN3-209ENST00000538995 SPRR2EP22531 72 aa4.65□□□□□ -1.67
RTN3-209ENST00000538995 SPRR2BP35325 72 aa4.65□□□□□ -1.67
RTN3-209ENST00000538995 SPRR2AP35326 72 aa4.65□□□□□ -1.67
RTN3-209ENST00000538995 KRTAP10-12P60413 245 aa4.63□□□□□ -1.67
RTN3-209ENST00000538995 PRR15LQ9BU68 103 aa4.63□□□□□ -1.67
RTN3-209ENST00000538995 KRTAP10-7P60409 375 aaPredicted RBP4.62□□□□□ -1.67
RTN3-209ENST00000538995 KRTAP2-3P0C7H8 128 aa4.61□□□□□ -1.67
RTN3-209ENST00000538995 KRTAP2-4Q9BYR9 128 aa4.61□□□□□ -1.67
RTN3-209ENST00000538995 LCE1AQ5T7P2 110 aa4.6□□□□□ -1.67
RTN3-209ENST00000538995 COA5Q86WW8 74 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms