RNA–Protein interactions for RNA: ENST00000537739.5

HDGF-210, Transcript of heparin binding growth factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGF, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-210ENST00000537739 LCA10Q71F78 164 aa13.28□□□□□ -0.28
HDGF-210ENST00000537739 SPTSSBQ8NFR3 76 aa13.2□□□□□ -0.3
HDGF-210ENST00000537739 CDC42SE1Q9NRR8 79 aa13.13□□□□□ -0.31
HDGF-210ENST00000537739 KRTAP3-3Q9BYR6 98 aa13.08□□□□□ -0.32
HDGF-210ENST00000537739 SEC61GP60059 68 aa13.03□□□□□ -0.32
HDGF-210ENST00000537739 PCLOQ9Y6V0 5065 aa12.97□□□□□ -0.33
HDGF-210ENST00000537739 S4R3F8 94 aa12.97□□□□□ -0.33
HDGF-210ENST00000537739 UQCR11O14957 56 aa12.96□□□□□ -0.33
HDGF-210ENST00000537739 H1FX-AS1Q4G0G2 97 aa12.95□□□□□ -0.34
HDGF-210ENST00000537739 SPATA8Q6RVD6 105 aa12.93□□□□□ -0.34
HDGF-210ENST00000537739 MUC17Q685J3 4493 aa12.92□□□□□ -0.34
HDGF-210ENST00000537739 SEC61BP60468 96 aaKnown RBP12.92□□□□□ -0.34
HDGF-210ENST00000537739 MIR22HGQ0VDD5 57 aa12.9□□□□□ -0.34
HDGF-210ENST00000537739 KRTAP4-1Q9BYQ7 146 aa12.89□□□□□ -0.35
HDGF-210ENST00000537739 RBM12B-AS1Q9P1G2 102 aa12.88□□□□□ -0.35
HDGF-210ENST00000537739 HERC1Q15751 4861 aa12.86□□□□□ -0.35
HDGF-210ENST00000537739 PMAIP1Q13794 54 aa12.82□□□□□ -0.36
HDGF-210ENST00000537739 A0A1B0GU33 70 aa12.79□□□□□ -0.36
HDGF-210ENST00000537739 H0YAA0 97 aa12.75□□□□□ -0.37
HDGF-210ENST00000537739 KRTAP10-6P60371 365 aaPredicted RBP12.74□□□□□ -0.37
HDGF-210ENST00000537739 KRTAP3-2Q9BYR7 98 aa12.74□□□□□ -0.37
HDGF-210ENST00000537739 A6NN06 94 aa12.71□□□□□ -0.37
HDGF-210ENST00000537739 HMCN2Q8NDA2 5059 aa12.7□□□□□ -0.38
HDGF-210ENST00000537739 CSAG1Q6PB30 78 aa12.6□□□□□ -0.39
HDGF-210ENST00000537739 MUC2Q02817 5179 aa12.6□□□□□ -0.39
HDGF-210ENST00000537739 P0C880 135 aa12.6□□□□□ -0.39
HDGF-210ENST00000537739 KRTAP19-2Q3LHN2 52 aa12.58□□□□□ -0.4
HDGF-210ENST00000537739 ADM2Q7Z4H4 148 aa12.53□□□□□ -0.4
HDGF-210ENST00000537739 KRTAP13-4Q3LI77 160 aa12.52□□□□□ -0.4
HDGF-210ENST00000537739 KTN1-AS1Q86SY8 53 aa12.37□□□□□ -0.43
HDGF-210ENST00000537739 A0A0D9SG42 100 aa12.3□□□□□ -0.44
HDGF-210ENST00000537739 FLGP20930 4061 aaPredicted RBP12.28□□□□□ -0.44
HDGF-210ENST00000537739 UBR4Q5T4S7 5183 aa12.14□□□□□ -0.47
HDGF-210ENST00000537739 M0QZ58 72 aa12.11□□□□□ -0.47
HDGF-210ENST00000537739 LORP23490 312 aaPredicted RBP12.11□□□□□ -0.47
HDGF-210ENST00000537739 RNF213Q63HN8 5207 aa12.1□□□□□ -0.47
HDGF-210ENST00000537739 PRAC1Q96KF2 57 aa12.1□□□□□ -0.47
HDGF-210ENST00000537739 K7ERS5 55 aa12.09□□□□□ -0.47
HDGF-210ENST00000537739 LCE2CQ5TA81 110 aa12.09□□□□□ -0.47
HDGF-210ENST00000537739 FAT4Q6V0I7 4981 aa12.04□□□□□ -0.48
HDGF-210ENST00000537739 KRTAP12-2P59991 146 aa12.03□□□□□ -0.48
HDGF-210ENST00000537739 KRTAP12-1P59990 96 aa11.99□□□□□ -0.49
HDGF-210ENST00000537739 R4GN34 69 aa11.98□□□□□ -0.49
HDGF-210ENST00000537739 SPINT4Q6UDR6 99 aa11.92□□□□□ -0.5
HDGF-210ENST00000537739 LINC01554Q52M75 96 aa11.91□□□□□ -0.5
HDGF-210ENST00000537739 ROMO1P60602 79 aa11.79□□□□□ -0.52
HDGF-210ENST00000537739 MT1HP80294 61 aa11.77□□□□□ -0.53
HDGF-210ENST00000537739 CRIPTQ9P021 101 aa11.69□□□□□ -0.54
HDGF-210ENST00000537739 M0R2T5 61 aa11.66□□□□□ -0.54
HDGF-210ENST00000537739 KRTAP25-1Q3LHN0 102 aa11.57□□□□□ -0.56
HDGF-210ENST00000537739 KRTAP9-8Q9BYQ0 159 aa11.43□□□□□ -0.58
HDGF-210ENST00000537739 MT2AP02795 61 aa11.42□□□□□ -0.58
HDGF-210ENST00000537739 MT1FP04733 61 aa11.4□□□□□ -0.58
HDGF-210ENST00000537739 C10orf95Q9H7T3 257 aa11.39□□□□□ -0.59
HDGF-210ENST00000537739 KRTAP19-1Q8IUB9 90 aa11.37□□□□□ -0.59
HDGF-210ENST00000537739 SPRR2GQ9BYE4 73 aa11.36□□□□□ -0.59
HDGF-210ENST00000537739 KRTAP10-10P60014 251 aa11.32□□□□□ -0.6
HDGF-210ENST00000537739 CAMK2N1Q7Z7J9 78 aa11.28□□□□□ -0.6
HDGF-210ENST00000537739 PLAC4Q8WY50 150 aa11.04□□□□□ -0.64
HDGF-210ENST00000537739 KRTAP9-3Q9BYQ3 159 aa10.98□□□□□ -0.65
HDGF-210ENST00000537739 KRTAP19-8Q3LI54 63 aa10.97□□□□□ -0.65
HDGF-210ENST00000537739 LCE2AQ5TA79 106 aaPredicted RBP10.94□□□□□ -0.66
HDGF-210ENST00000537739 MT1BP07438 61 aa10.88□□□□□ -0.67
HDGF-210ENST00000537739 TNP1P09430 55 aa10.77□□□□□ -0.69
HDGF-210ENST00000537739 LCE2BO14633 110 aa10.65□□□□□ -0.7
HDGF-210ENST00000537739 KRTAP10-5P60370 271 aa10.64□□□□□ -0.71
HDGF-210ENST00000537739 MT1XP80297 61 aa10.64□□□□□ -0.71
HDGF-210ENST00000537739 PP632Q6XCG6 107 aa10.63□□□□□ -0.71
HDGF-210ENST00000537739 KRTAP23-1A1A580 65 aa10.49□□□□□ -0.73
HDGF-210ENST00000537739 USH2AO75445 5202 aa10.43□□□□□ -0.74
HDGF-210ENST00000537739 KRTAP15-1Q3LI76 137 aa10.41□□□□□ -0.74
HDGF-210ENST00000537739 LCE3AQ5TA76 89 aa10.37□□□□□ -0.75
HDGF-210ENST00000537739 KRTAP10-7P60409 375 aaPredicted RBP10.29□□□□□ -0.76
HDGF-210ENST00000537739 PRO2289Q9P1D8 64 aa10.26□□□□□ -0.77
HDGF-210ENST00000537739 KRTAP10-12P60413 245 aa10.16□□□□□ -0.78
HDGF-210ENST00000537739 KRTAP8-1Q8IUC2 63 aa10.09□□□□□ -0.79
HDGF-210ENST00000537739 H3BS24 57 aa10.05□□□□□ -0.8
HDGF-210ENST00000537739 SSPOA2VEC9 5147 aa9.96□□□□□ -0.82
HDGF-210ENST00000537739 KMT2DO14686 5537 aa9.92□□□□□ -0.82
HDGF-210ENST00000537739 KRTAP12-3P60328 96 aa9.88□□□□□ -0.83
HDGF-210ENST00000537739 FSIP2Q5CZC0 6907 aa9.85□□□□□ -0.83
HDGF-210ENST00000537739 KRTAP4-8A0A0G2JLE6 195 aa9.83□□□□□ -0.84
HDGF-210ENST00000537739 NDUFAF8A1L188 74 aa9.83□□□□□ -0.84
HDGF-210ENST00000537739 KRTAP4-8Q9BYQ9 185 aa9.83□□□□□ -0.84
HDGF-210ENST00000537739 KRTAP19-6Q3LI70 58 aa9.75□□□□□ -0.85
HDGF-210ENST00000537739 SPRR5A0A1B0GTR4 108 aa9.73□□□□□ -0.85
HDGF-210ENST00000537739 KRTAP19-5Q3LI72 72 aa9.73□□□□□ -0.85
HDGF-210ENST00000537739 LCE2DQ5TA82 110 aaPredicted RBP9.66□□□□□ -0.86
HDGF-210ENST00000537739 LUZP6Q538Z0 58 aa9.53□□□□□ -0.88
HDGF-210ENST00000537739 KRTAP19-7Q3SYF9 63 aa9.49□□□□□ -0.89
HDGF-210ENST00000537739 FCGBPQ9Y6R7 5405 aaPredicted RBP9.43□□□□□ -0.9
HDGF-210ENST00000537739 LCE3CQ5T5A8 94 aa9.27□□□□□ -0.93
HDGF-210ENST00000537739 MT1EP04732 61 aa9.26□□□□□ -0.93
HDGF-210ENST00000537739 MT1LQ93083 61 aa9.15□□□□□ -0.94
HDGF-210ENST00000537739 KRTAP9-2Q9BYQ4 174 aa9.12□□□□□ -0.95
HDGF-210ENST00000537739 KRTAP4-7Q9BYR0 210 aa9.11□□□□□ -0.95
HDGF-210ENST00000537739 MUC12Q9UKN1 5478 aa8.97□□□□□ -0.97
HDGF-210ENST00000537739 MACF1Q9UPN3 7388 aaKnown RBP8.97□□□□□ -0.97
HDGF-210ENST00000537739 KRTAP9-6A8MVA2 160 aa8.95□□□□□ -0.98
HDGF-210ENST00000537739 KRTAP19-4Q3LI73 84 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms