RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 CDC42SE1Q9NRR8 79 aa9.17□□□□□ -0.94
SNX17-210ENST00000537606 LPAP08519 4548 aa9.13□□□□□ -0.95
SNX17-210ENST00000537606 LRP2P98164 4655 aa9.13□□□□□ -0.95
SNX17-210ENST00000537606 KTN1-AS1Q86SY8 53 aa9.1□□□□□ -0.95
SNX17-210ENST00000537606 HERC2O95714 4834 aa9.08□□□□□ -0.96
SNX17-210ENST00000537606 COX6B2Q6YFQ2 88 aa9.05□□□□□ -0.96
SNX17-210ENST00000537606 TPRXLQ17RH7 258 aa9.02□□□□□ -0.97
SNX17-210ENST00000537606 BIRC6Q9NR09 4857 aa9.01□□□□□ -0.97
SNX17-210ENST00000537606 UQCR11O14957 56 aa8.96□□□□□ -0.98
SNX17-210ENST00000537606 A6NN06 94 aa8.94□□□□□ -0.98
SNX17-210ENST00000537606 MIR22HGQ0VDD5 57 aa8.94□□□□□ -0.98
SNX17-210ENST00000537606 SPATA8Q6RVD6 105 aa8.94□□□□□ -0.98
SNX17-210ENST00000537606 KRTAP3-3Q9BYR6 98 aa8.81□□□□□ -1
SNX17-210ENST00000537606 H0YAA0 97 aa8.78□□□□□ -1
SNX17-210ENST00000537606 A0A1B0GU33 70 aa8.77□□□□□ -1.01
SNX17-210ENST00000537606 S4R3F8 94 aa8.77□□□□□ -1.01
SNX17-210ENST00000537606 H1FX-AS1Q4G0G2 97 aa8.74□□□□□ -1.01
SNX17-210ENST00000537606 PCLOQ9Y6V0 5065 aa8.74□□□□□ -1.01
SNX17-210ENST00000537606 HERC1Q15751 4861 aa8.71□□□□□ -1.02
SNX17-210ENST00000537606 SEC61BP60468 96 aaKnown RBP8.7□□□□□ -1.02
SNX17-210ENST00000537606 MUC17Q685J3 4493 aa8.68□□□□□ -1.02
SNX17-210ENST00000537606 KRTAP4-1Q9BYQ7 146 aa8.67□□□□□ -1.02
SNX17-210ENST00000537606 KRTAP10-6P60371 365 aaPredicted RBP8.65□□□□□ -1.02
SNX17-210ENST00000537606 ADM2Q7Z4H4 148 aa8.64□□□□□ -1.03
SNX17-210ENST00000537606 KRTAP3-2Q9BYR7 98 aa8.61□□□□□ -1.03
SNX17-210ENST00000537606 PRAC1Q96KF2 57 aa8.61□□□□□ -1.03
SNX17-210ENST00000537606 MUC2Q02817 5179 aa8.6□□□□□ -1.03
SNX17-210ENST00000537606 LINC01554Q52M75 96 aa8.59□□□□□ -1.03
SNX17-210ENST00000537606 KRTAP13-4Q3LI77 160 aa8.56□□□□□ -1.04
SNX17-210ENST00000537606 P0C880 135 aa8.55□□□□□ -1.04
SNX17-210ENST00000537606 A0A0A0MQY5 61 aa8.54□□□□□ -1.04
SNX17-210ENST00000537606 CSAG1Q6PB30 78 aa8.52□□□□□ -1.05
SNX17-210ENST00000537606 HMCN2Q8NDA2 5059 aa8.52□□□□□ -1.05
SNX17-210ENST00000537606 A0A0D9SG42 100 aa8.48□□□□□ -1.05
SNX17-210ENST00000537606 KRTAP19-2Q3LHN2 52 aa8.4□□□□□ -1.06
SNX17-210ENST00000537606 K7ERS5 55 aa8.34□□□□□ -1.07
SNX17-210ENST00000537606 KRTAP12-2P59991 146 aa8.24□□□□□ -1.09
SNX17-210ENST00000537606 CRIPTQ9P021 101 aa8.23□□□□□ -1.09
SNX17-210ENST00000537606 FLGP20930 4061 aaPredicted RBP8.23□□□□□ -1.09
SNX17-210ENST00000537606 UBR4Q5T4S7 5183 aa8.22□□□□□ -1.09
SNX17-210ENST00000537606 LCE2DQ5TA82 110 aaPredicted RBP8.21□□□□□ -1.1
SNX17-210ENST00000537606 FAT4Q6V0I7 4981 aa8.2□□□□□ -1.1
SNX17-210ENST00000537606 RNF213Q63HN8 5207 aa8.2□□□□□ -1.1
SNX17-210ENST00000537606 LORP23490 312 aaPredicted RBP8.19□□□□□ -1.1
SNX17-210ENST00000537606 SPINT4Q6UDR6 99 aa8.19□□□□□ -1.1
SNX17-210ENST00000537606 KRTAP12-1P59990 96 aa8.17□□□□□ -1.1
SNX17-210ENST00000537606 M0QZ58 72 aa8.17□□□□□ -1.1
SNX17-210ENST00000537606 ROMO1P60602 79 aa8.15□□□□□ -1.1
SNX17-210ENST00000537606 R4GN34 69 aa8.13□□□□□ -1.11
SNX17-210ENST00000537606 KRTAP25-1Q3LHN0 102 aa8.12□□□□□ -1.11
SNX17-210ENST00000537606 LCE2CQ5TA81 110 aa8.09□□□□□ -1.11
SNX17-210ENST00000537606 C10orf95Q9H7T3 257 aa7.97□□□□□ -1.13
SNX17-210ENST00000537606 M0R2T5 61 aa7.93□□□□□ -1.14
SNX17-210ENST00000537606 MT1HP80294 61 aa7.91□□□□□ -1.14
SNX17-210ENST00000537606 MT2AP02795 61 aa7.67□□□□□ -1.18
SNX17-210ENST00000537606 MT1FP04733 61 aa7.67□□□□□ -1.18
SNX17-210ENST00000537606 CAMK2N1Q7Z7J9 78 aa7.67□□□□□ -1.18
SNX17-210ENST00000537606 KRTAP10-10P60014 251 aa7.66□□□□□ -1.18
SNX17-210ENST00000537606 KRTAP9-8Q9BYQ0 159 aa7.66□□□□□ -1.18
SNX17-210ENST00000537606 KRTAP19-1Q8IUB9 90 aa7.63□□□□□ -1.19
SNX17-210ENST00000537606 SPRR2GQ9BYE4 73 aa7.61□□□□□ -1.19
SNX17-210ENST00000537606 NDUFAF8A1L188 74 aa7.56□□□□□ -1.2
SNX17-210ENST00000537606 PLAC4Q8WY50 150 aa7.47□□□□□ -1.21
SNX17-210ENST00000537606 LCE2AQ5TA79 106 aaPredicted RBP7.39□□□□□ -1.23
SNX17-210ENST00000537606 LUZP6Q538Z0 58 aa7.35□□□□□ -1.23
SNX17-210ENST00000537606 KRTAP9-3Q9BYQ3 159 aa7.35□□□□□ -1.23
SNX17-210ENST00000537606 KRTAP15-1Q3LI76 137 aa7.34□□□□□ -1.23
SNX17-210ENST00000537606 KRTAP19-8Q3LI54 63 aa7.33□□□□□ -1.24
SNX17-210ENST00000537606 LCE2BO14633 110 aa7.32□□□□□ -1.24
SNX17-210ENST00000537606 KRTAP23-1A1A580 65 aa7.31□□□□□ -1.24
SNX17-210ENST00000537606 MT1BP07438 61 aa7.3□□□□□ -1.24
SNX17-210ENST00000537606 TNP1P09430 55 aa7.3□□□□□ -1.24
SNX17-210ENST00000537606 PP632Q6XCG6 107 aa7.25□□□□□ -1.25
SNX17-210ENST00000537606 KRTAP10-5P60370 271 aa7.15□□□□□ -1.26
SNX17-210ENST00000537606 MT1XP80297 61 aa7.15□□□□□ -1.27
SNX17-210ENST00000537606 USH2AO75445 5202 aa7.14□□□□□ -1.27
SNX17-210ENST00000537606 LCE3AQ5TA76 89 aa7.02□□□□□ -1.28
SNX17-210ENST00000537606 KRTAP10-7P60409 375 aaPredicted RBP6.95□□□□□ -1.3
SNX17-210ENST00000537606 PRO2289Q9P1D8 64 aa6.92□□□□□ -1.3
SNX17-210ENST00000537606 KRTAP10-12P60413 245 aa6.86□□□□□ -1.31
SNX17-210ENST00000537606 FSIP2Q5CZC0 6907 aa6.82□□□□□ -1.32
SNX17-210ENST00000537606 KMT2DO14686 5537 aa6.79□□□□□ -1.32
SNX17-210ENST00000537606 KRTAP8-1Q8IUC2 63 aa6.78□□□□□ -1.32
SNX17-210ENST00000537606 SSPOA2VEC9 5147 aa6.72□□□□□ -1.33
SNX17-210ENST00000537606 SPRR5A0A1B0GTR4 108 aa6.69□□□□□ -1.34
SNX17-210ENST00000537606 KRTAP12-3P60328 96 aa6.68□□□□□ -1.34
SNX17-210ENST00000537606 KRTAP4-8A0A0G2JLE6 195 aa6.65□□□□□ -1.34
SNX17-210ENST00000537606 KRTAP4-8Q9BYQ9 185 aa6.65□□□□□ -1.34
SNX17-210ENST00000537606 KRTAP19-5Q3LI72 72 aa6.57□□□□□ -1.36
SNX17-210ENST00000537606 KRTAP19-6Q3LI70 58 aa6.5□□□□□ -1.37
SNX17-210ENST00000537606 KRTAP19-7Q3SYF9 63 aa6.38□□□□□ -1.39
SNX17-210ENST00000537606 FCGBPQ9Y6R7 5405 aaPredicted RBP6.35□□□□□ -1.39
SNX17-210ENST00000537606 LCE3CQ5T5A8 94 aa6.25□□□□□ -1.41
SNX17-210ENST00000537606 MT1EP04732 61 aa6.21□□□□□ -1.41
SNX17-210ENST00000537606 KRTAP4-7Q9BYR0 210 aa6.18□□□□□ -1.42
SNX17-210ENST00000537606 MT1LQ93083 61 aa6.15□□□□□ -1.43
SNX17-210ENST00000537606 MUC12Q9UKN1 5478 aa6.12□□□□□ -1.43
SNX17-210ENST00000537606 KRTAP9-2Q9BYQ4 174 aa6.12□□□□□ -1.43
SNX17-210ENST00000537606 MACF1Q9UPN3 7388 aaKnown RBP6.11□□□□□ -1.43
SNX17-210ENST00000537606 KRTAP9-6A8MVA2 160 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 158.3 ms