RNA–Protein interactions for RNA: ENST00000537403.5

SEC23A-202, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 4,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-202ENST00000537403 A0A087X002 238 aa2.39□□□□□ -2.03
SEC23A-202ENST00000537403 LINC00483Q53H64 154 aa2.39□□□□□ -2.03
SEC23A-202ENST00000537403 CSAG1Q6PB30 78 aa2.39□□□□□ -2.03
SEC23A-202ENST00000537403 SEC61BP60468 96 aaKnown RBP2.39□□□□□ -2.03
SEC23A-202ENST00000537403 A0A1B0GU33 70 aa2.39□□□□□ -2.03
SEC23A-202ENST00000537403 LCE1DQ5T752 114 aa2.38□□□□□ -2.03
SEC23A-202ENST00000537403 MYCBP2O75592 4640 aa2.38□□□□□ -2.03
SEC23A-202ENST00000537403 KRTAP11-1Q8IUC1 163 aa2.38□□□□□ -2.03
SEC23A-202ENST00000537403 TNXBP22105 4242 aa2.38□□□□□ -2.03
SEC23A-202ENST00000537403 CDC42SE1Q9NRR8 79 aa2.37□□□□□ -2.03
SEC23A-202ENST00000537403 CAMK2N1Q7Z7J9 78 aa2.37□□□□□ -2.03
SEC23A-202ENST00000537403 Q1T7F1 81 aa2.37□□□□□ -2.03
SEC23A-202ENST00000537403 FAT1Q14517 4588 aa2.37□□□□□ -2.03
SEC23A-202ENST00000537403 CYSTM1Q9H1C7 97 aa2.37□□□□□ -2.03
SEC23A-202ENST00000537403 KRTAP7-1Q8IUC3 87 aa2.36□□□□□ -2.03
SEC23A-202ENST00000537403 FP248Q71RG6 208 aaPredicted RBP2.36□□□□□ -2.03
SEC23A-202ENST00000537403 S4R3F8 94 aa2.35□□□□□ -2.03
SEC23A-202ENST00000537403 LINC01558Q9Y6Z2 57 aa2.35□□□□□ -2.03
SEC23A-202ENST00000537403 KRTAP29-1A8MX34 341 aaPredicted RBP2.34□□□□□ -2.03
SEC23A-202ENST00000537403 NOTCH2NLQ7Z3S9 236 aa2.34□□□□□ -2.04
SEC23A-202ENST00000537403 R4GN34 69 aa2.34□□□□□ -2.04
SEC23A-202ENST00000537403 HERC1Q15751 4861 aa2.34□□□□□ -2.04
SEC23A-202ENST00000537403 KTN1-AS1Q86SY8 53 aa2.33□□□□□ -2.04
SEC23A-202ENST00000537403 KRTAP15-1Q3LI76 137 aa2.33□□□□□ -2.04
SEC23A-202ENST00000537403 Q75L30 129 aa2.33□□□□□ -2.04
SEC23A-202ENST00000537403 DMAC1Q96GE9 116 aa2.33□□□□□ -2.04
SEC23A-202ENST00000537403 OXTP01178 125 aa2.33□□□□□ -2.04
SEC23A-202ENST00000537403 HMCN2Q8NDA2 5059 aa2.32□□□□□ -2.04
SEC23A-202ENST00000537403 LCE5AQ5TCM9 118 aa2.32□□□□□ -2.04
SEC23A-202ENST00000537403 LCA10Q71F78 164 aa2.32□□□□□ -2.04
SEC23A-202ENST00000537403 KRTAP13-2Q52LG2 175 aa2.32□□□□□ -2.04
SEC23A-202ENST00000537403 KRTAP13-1Q8IUC0 172 aa2.32□□□□□ -2.04
SEC23A-202ENST00000537403 SRRM2Q9UQ35 2752 aaKnown RBP2.32□□□□□ -2.04
SEC23A-202ENST00000537403 ASB16-AS1Q495Z4 193 aa2.31□□□□□ -2.04
SEC23A-202ENST00000537403 KRTAP4-5Q9BYR2 181 aa2.31□□□□□ -2.04
SEC23A-202ENST00000537403 KRTAP4-7Q9BYR0 210 aa2.31□□□□□ -2.04
SEC23A-202ENST00000537403 RPS29P62273 56 aaKnown RBP2.3□□□□□ -2.04
SEC23A-202ENST00000537403 Q5VV11 94 aa2.3□□□□□ -2.04
SEC23A-202ENST00000537403 Q5XG85 94 aa2.3□□□□□ -2.04
SEC23A-202ENST00000537403 M0QZ58 72 aa2.28□□□□□ -2.04
SEC23A-202ENST00000537403 RPL37P61927 97 aaKnown RBP2.28□□□□□ -2.04
SEC23A-202ENST00000537403 KRTAP4-9Q9BYQ8 210 aa2.27□□□□□ -2.05
SEC23A-202ENST00000537403 LUZP6Q538Z0 58 aa2.27□□□□□ -2.05
SEC23A-202ENST00000537403 H1FX-AS1Q4G0G2 97 aa2.26□□□□□ -2.05
SEC23A-202ENST00000537403 ADM2Q7Z4H4 148 aa2.26□□□□□ -2.05
SEC23A-202ENST00000537403 PRAC1Q96KF2 57 aa2.25□□□□□ -2.05
SEC23A-202ENST00000537403 KRTAP4-11Q9BYQ6 195 aa2.25□□□□□ -2.05
SEC23A-202ENST00000537403 KRTAP10-4P60372 401 aaPredicted RBP2.25□□□□□ -2.05
SEC23A-202ENST00000537403 SPATA8Q6RVD6 105 aa2.25□□□□□ -2.05
SEC23A-202ENST00000537403 KRTAP4-2Q9BYR5 136 aa2.25□□□□□ -2.05
SEC23A-202ENST00000537403 LRP1Q07954 4544 aaKnown RBP2.24□□□□□ -2.05
SEC23A-202ENST00000537403 MUC17Q685J3 4493 aa2.23□□□□□ -2.05
SEC23A-202ENST00000537403 A0A0A0MQY5 61 aa2.23□□□□□ -2.05
SEC23A-202ENST00000537403 KRTAP1-4P0C5Y4 121 aa2.23□□□□□ -2.05
SEC23A-202ENST00000537403 PLAC4Q8WY50 150 aa2.22□□□□□ -2.05
SEC23A-202ENST00000537403 A8MUU9 505 aa2.22□□□□□ -2.05
SEC23A-202ENST00000537403 ROMO1P60602 79 aa2.22□□□□□ -2.05
SEC23A-202ENST00000537403 C20orf166-AS1Q96NR2 134 aa2.22□□□□□ -2.05
SEC23A-202ENST00000537403 A8MU10 97 aa2.19□□□□□ -2.06
SEC23A-202ENST00000537403 UBR4Q5T4S7 5183 aa2.18□□□□□ -2.06
SEC23A-202ENST00000537403 TPRXLQ17RH7 258 aa2.15□□□□□ -2.07
SEC23A-202ENST00000537403 MT1HL1P0DM35 61 aa2.13□□□□□ -2.07
SEC23A-202ENST00000537403 KRTAP16-1A8MUX0 517 aa2.12□□□□□ -2.07
SEC23A-202ENST00000537403 KRTAP10-8P60410 259 aa2.12□□□□□ -2.07
SEC23A-202ENST00000537403 LPAP08519 4548 aa2.12□□□□□ -2.07
SEC23A-202ENST00000537403 KRTAP13-3Q3SY46 172 aa2.12□□□□□ -2.07
SEC23A-202ENST00000537403 A6NN06 94 aa2.11□□□□□ -2.07
SEC23A-202ENST00000537403 TNP1P09430 55 aa2.11□□□□□ -2.07
SEC23A-202ENST00000537403 RNF213Q63HN8 5207 aa2.1□□□□□ -2.07
SEC23A-202ENST00000537403 KRTAP25-1Q3LHN0 102 aa2.1□□□□□ -2.07
SEC23A-202ENST00000537403 LRP2P98164 4655 aa2.08□□□□□ -2.08
SEC23A-202ENST00000537403 KRTAP10-10P60014 251 aa2.08□□□□□ -2.08
SEC23A-202ENST00000537403 FAT4Q6V0I7 4981 aa2.08□□□□□ -2.08
SEC23A-202ENST00000537403 P0C880 135 aa2.06□□□□□ -2.08
SEC23A-202ENST00000537403 H0YAA0 97 aa2.05□□□□□ -2.08
SEC23A-202ENST00000537403 C10orf95Q9H7T3 257 aa2.03□□□□□ -2.08
SEC23A-202ENST00000537403 MUC2Q02817 5179 aa2.03□□□□□ -2.09
SEC23A-202ENST00000537403 NDUFAF8A1L188 74 aa2.02□□□□□ -2.09
SEC23A-202ENST00000537403 PP632Q6XCG6 107 aa2.02□□□□□ -2.09
SEC23A-202ENST00000537403 FLGP20930 4061 aaPredicted RBP2.01□□□□□ -2.09
SEC23A-202ENST00000537403 PRO2289Q9P1D8 64 aa2□□□□□ -2.09
SEC23A-202ENST00000537403 KRTAP5-3Q6L8H2 238 aa1.96□□□□□ -2.09
SEC23A-202ENST00000537403 KRTAP12-2P59991 146 aa1.94□□□□□ -2.1
SEC23A-202ENST00000537403 KRTAP19-2Q3LHN2 52 aa1.93□□□□□ -2.1
SEC23A-202ENST00000537403 KRTAP12-1P59990 96 aa1.92□□□□□ -2.1
SEC23A-202ENST00000537403 KRTAP9-8Q9BYQ0 159 aa1.92□□□□□ -2.1
SEC23A-202ENST00000537403 LCE1AQ5T7P2 110 aa1.91□□□□□ -2.1
SEC23A-202ENST00000537403 KRTAP10-6P60371 365 aaPredicted RBP1.9□□□□□ -2.11
SEC23A-202ENST00000537403 KRTAP13-4Q3LI77 160 aa1.9□□□□□ -2.11
SEC23A-202ENST00000537403 KRTAP4-1Q9BYQ7 146 aa1.86□□□□□ -2.11
SEC23A-202ENST00000537403 KRTAP2-2Q9BYT5 123 aa1.82□□□□□ -2.12
SEC23A-202ENST00000537403 MT1HP80294 61 aa1.8□□□□□ -2.12
SEC23A-202ENST00000537403 CRCT1Q9UGL9 99 aa1.8□□□□□ -2.12
SEC23A-202ENST00000537403 SSPOA2VEC9 5147 aa1.78□□□□□ -2.12
SEC23A-202ENST00000537403 KRTAP10-12P60413 245 aa1.77□□□□□ -2.13
SEC23A-202ENST00000537403 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.76□□□□□ -2.13
SEC23A-202ENST00000537403 LCE1FQ5T754 118 aa1.74□□□□□ -2.13
SEC23A-202ENST00000537403 USH2AO75445 5202 aa1.74□□□□□ -2.13
SEC23A-202ENST00000537403 KRTAP12-3P60328 96 aa1.72□□□□□ -2.13
SEC23A-202ENST00000537403 LCE3CQ5T5A8 94 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms