RNA–Protein interactions for RNA: ENST00000536226.1

CRNKL1-207, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRNKL1, Length 4,009 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-207ENST00000536226 MGAM2Q2M2H8 2515 aa4.29□□□□□ -1.72
CRNKL1-207ENST00000536226 Q6ZRN7 208 aaPredicted RBP4.28□□□□□ -1.72
CRNKL1-207ENST00000536226 APOBP04114 4563 aaKnown RBP4.27□□□□□ -1.73
CRNKL1-207ENST00000536226 RYR3Q15413 4870 aa4.26□□□□□ -1.73
CRNKL1-207ENST00000536226 C9orf92A6NGG3 77 aa4.26□□□□□ -1.73
CRNKL1-207ENST00000536226 PP632Q6XCG6 107 aa4.26□□□□□ -1.73
CRNKL1-207ENST00000536226 TGP01266 2768 aa4.25□□□□□ -1.73
CRNKL1-207ENST00000536226 M0QZ58 72 aa4.22□□□□□ -1.73
CRNKL1-207ENST00000536226 INE1O15225 51 aa4.22□□□□□ -1.73
CRNKL1-207ENST00000536226 DYNC1H1Q14204 4646 aaKnown RBP4.21□□□□□ -1.74
CRNKL1-207ENST00000536226 KRTAP10-8P60410 259 aa4.21□□□□□ -1.74
CRNKL1-207ENST00000536226 KRTAP23-1A1A580 65 aa4.21□□□□□ -1.74
CRNKL1-207ENST00000536226 FAT3Q8TDW7 4589 aa4.17□□□□□ -1.74
CRNKL1-207ENST00000536226 XP32Q5T750 250 aa4.17□□□□□ -1.74
CRNKL1-207ENST00000536226 KRTAP21-3Q3LHN1 58 aa4.16□□□□□ -1.74
CRNKL1-207ENST00000536226 TNXBP22105 4242 aa4.14□□□□□ -1.75
CRNKL1-207ENST00000536226 KRTAP12-2P59991 146 aa4.13□□□□□ -1.75
CRNKL1-207ENST00000536226 HSPG2P98160 4391 aa4.12□□□□□ -1.75
CRNKL1-207ENST00000536226 FAT1Q14517 4588 aa4.1□□□□□ -1.75
CRNKL1-207ENST00000536226 KRTAP12-1P59990 96 aa4.07□□□□□ -1.76
CRNKL1-207ENST00000536226 KRTAP13-4Q3LI77 160 aa4.05□□□□□ -1.76
CRNKL1-207ENST00000536226 EPPK1P58107 5090 aaKnown RBP4.05□□□□□ -1.76
CRNKL1-207ENST00000536226 KRTAP10-2P60368 255 aa4.01□□□□□ -1.77
CRNKL1-207ENST00000536226 KRTAP10-6P60371 365 aaPredicted RBP4.01□□□□□ -1.77
CRNKL1-207ENST00000536226 RYR1P21817 5038 aa4.01□□□□□ -1.77
CRNKL1-207ENST00000536226 LRP1Q07954 4544 aaKnown RBP4□□□□□ -1.77
CRNKL1-207ENST00000536226 KRTAP13-2Q52LG2 175 aa4□□□□□ -1.77
CRNKL1-207ENST00000536226 KRTAP3-1Q9BYR8 98 aa3.99□□□□□ -1.77
CRNKL1-207ENST00000536226 KRTAP10-4P60372 401 aaPredicted RBP3.97□□□□□ -1.77
CRNKL1-207ENST00000536226 RPS29P62273 56 aaKnown RBP3.97□□□□□ -1.77
CRNKL1-207ENST00000536226 KRTAP17-1Q9BYP8 105 aa3.97□□□□□ -1.77
CRNKL1-207ENST00000536226 A0A1B0GVY2 172 aa3.96□□□□□ -1.78
CRNKL1-207ENST00000536226 TNP1P09430 55 aa3.95□□□□□ -1.78
CRNKL1-207ENST00000536226 KRTAP10-1P60331 282 aa3.94□□□□□ -1.78
CRNKL1-207ENST00000536226 MYCBP2O75592 4640 aa3.93□□□□□ -1.78
CRNKL1-207ENST00000536226 KRTAP3-2Q9BYR7 98 aa3.92□□□□□ -1.78
CRNKL1-207ENST00000536226 KRTAP1-4P0C5Y4 121 aa3.91□□□□□ -1.78
CRNKL1-207ENST00000536226 ABCA13Q86UQ4 5058 aa3.89□□□□□ -1.79
CRNKL1-207ENST00000536226 LPAP08519 4548 aa3.89□□□□□ -1.79
CRNKL1-207ENST00000536226 KIAA1109Q2LD37 5005 aa3.88□□□□□ -1.79
CRNKL1-207ENST00000536226 Q5VSD8 79 aa3.84□□□□□ -1.8
CRNKL1-207ENST00000536226 HERC2O95714 4834 aa3.75□□□□□ -1.81
CRNKL1-207ENST00000536226 KRTAP3-3Q9BYR6 98 aa3.74□□□□□ -1.81
CRNKL1-207ENST00000536226 MUC17Q685J3 4493 aa3.72□□□□□ -1.81
CRNKL1-207ENST00000536226 LRP2P98164 4655 aa3.7□□□□□ -1.82
CRNKL1-207ENST00000536226 BIRC6Q9NR09 4857 aa3.69□□□□□ -1.82
CRNKL1-207ENST00000536226 SMR3BP02814 79 aaPredicted RBP3.68□□□□□ -1.82
CRNKL1-207ENST00000536226 PCLOQ9Y6V0 5065 aa3.68□□□□□ -1.82
CRNKL1-207ENST00000536226 MT1HL1P0DM35 61 aa3.64□□□□□ -1.83
CRNKL1-207ENST00000536226 KRTAP4-5Q9BYR2 181 aa3.61□□□□□ -1.83
CRNKL1-207ENST00000536226 FLGP20930 4061 aaPredicted RBP3.59□□□□□ -1.83
CRNKL1-207ENST00000536226 HERC1Q15751 4861 aa3.58□□□□□ -1.84
CRNKL1-207ENST00000536226 HMCN2Q8NDA2 5059 aa3.57□□□□□ -1.84
CRNKL1-207ENST00000536226 SPRR5A0A1B0GTR4 108 aa3.57□□□□□ -1.84
CRNKL1-207ENST00000536226 MUC2Q02817 5179 aa3.56□□□□□ -1.84
CRNKL1-207ENST00000536226 KRTAP19-2Q3LHN2 52 aa3.46□□□□□ -1.86
CRNKL1-207ENST00000536226 KRTAP4-1Q9BYQ7 146 aa3.4□□□□□ -1.87
CRNKL1-207ENST00000536226 M0R2T5 61 aa3.38□□□□□ -1.87
CRNKL1-207ENST00000536226 UBR4Q5T4S7 5183 aa3.37□□□□□ -1.87
CRNKL1-207ENST00000536226 FAT4Q6V0I7 4981 aa3.35□□□□□ -1.87
CRNKL1-207ENST00000536226 LCE2DQ5TA82 110 aaPredicted RBP3.34□□□□□ -1.88
CRNKL1-207ENST00000536226 RNF213Q63HN8 5207 aa3.32□□□□□ -1.88
CRNKL1-207ENST00000536226 LCE3AQ5TA76 89 aa3.27□□□□□ -1.89
CRNKL1-207ENST00000536226 LORP23490 312 aaPredicted RBP3.25□□□□□ -1.89
CRNKL1-207ENST00000536226 LCE2CQ5TA81 110 aa3.24□□□□□ -1.89
CRNKL1-207ENST00000536226 KRTAP12-3P60328 96 aa3.22□□□□□ -1.89
CRNKL1-207ENST00000536226 KRTAP10-10P60014 251 aa3.22□□□□□ -1.89
CRNKL1-207ENST00000536226 KRTAP8-1Q8IUC2 63 aa3.09□□□□□ -1.91
CRNKL1-207ENST00000536226 KRTAP10-12P60413 245 aa3.09□□□□□ -1.91
CRNKL1-207ENST00000536226 MT1HP80294 61 aa3.04□□□□□ -1.92
CRNKL1-207ENST00000536226 KRTAP9-8Q9BYQ0 159 aa3.02□□□□□ -1.93
CRNKL1-207ENST00000536226 KRTAP19-1Q8IUB9 90 aa2.98□□□□□ -1.93
CRNKL1-207ENST00000536226 MT1FP04733 61 aa2.95□□□□□ -1.94
CRNKL1-207ENST00000536226 KRTAP10-5P60370 271 aa2.94□□□□□ -1.94
CRNKL1-207ENST00000536226 MT2AP02795 61 aa2.94□□□□□ -1.94
CRNKL1-207ENST00000536226 SPRR2GQ9BYE4 73 aa2.94□□□□□ -1.94
CRNKL1-207ENST00000536226 LCE3CQ5T5A8 94 aa2.93□□□□□ -1.94
CRNKL1-207ENST00000536226 KRTAP12-4P60329 112 aa2.93□□□□□ -1.94
CRNKL1-207ENST00000536226 LCE2AQ5TA79 106 aaPredicted RBP2.92□□□□□ -1.94
CRNKL1-207ENST00000536226 USH2AO75445 5202 aa2.9□□□□□ -1.95
CRNKL1-207ENST00000536226 LCE2BO14633 110 aa2.89□□□□□ -1.95
CRNKL1-207ENST00000536226 KRTAP9-3Q9BYQ3 159 aa2.88□□□□□ -1.95
CRNKL1-207ENST00000536226 MT1BP07438 61 aa2.85□□□□□ -1.95
CRNKL1-207ENST00000536226 KRTAP19-8Q3LI54 63 aa2.85□□□□□ -1.95
CRNKL1-207ENST00000536226 SSPOA2VEC9 5147 aa2.83□□□□□ -1.96
CRNKL1-207ENST00000536226 MT1XP80297 61 aa2.78□□□□□ -1.96
CRNKL1-207ENST00000536226 KMT2DO14686 5537 aa2.77□□□□□ -1.97
CRNKL1-207ENST00000536226 KRTAP2-3P0C7H8 128 aa2.75□□□□□ -1.97
CRNKL1-207ENST00000536226 KRTAP19-4Q3LI73 84 aa2.75□□□□□ -1.97
CRNKL1-207ENST00000536226 KRTAP2-4Q9BYR9 128 aa2.75□□□□□ -1.97
CRNKL1-207ENST00000536226 KRTAP2-1Q9BYU5 128 aa2.75□□□□□ -1.97
CRNKL1-207ENST00000536226 KRTAP19-5Q3LI72 72 aa2.72□□□□□ -1.97
CRNKL1-207ENST00000536226 CRCT1Q9UGL9 99 aa2.68□□□□□ -1.98
CRNKL1-207ENST00000536226 KRTAP10-7P60409 375 aaPredicted RBP2.66□□□□□ -1.98
CRNKL1-207ENST00000536226 PRM1P04553 51 aa2.64□□□□□ -1.99
CRNKL1-207ENST00000536226 KRTAP2-2Q9BYT5 123 aa2.61□□□□□ -1.99
CRNKL1-207ENST00000536226 LCE1AQ5T7P2 110 aa2.61□□□□□ -1.99
CRNKL1-207ENST00000536226 MT3P25713 68 aa2.59□□□□□ -1.99
CRNKL1-207ENST00000536226 LCE3EQ5T5B0 92 aa2.57□□□□□ -2
CRNKL1-207ENST00000536226 LOC100996750A0A140TA64 210 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms