RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 LCE2BO14633 110 aa10.42□□□□□ -0.74
VPS37C-202ENST00000535818 TRAV7A0A075B6U4 112 aa10.39□□□□□ -0.75
VPS37C-202ENST00000535818 USH2AO75445 5202 aa10.39□□□□□ -0.75
VPS37C-202ENST00000535818 KLKP1Q107X0 134 aa10.38□□□□□ -0.75
VPS37C-202ENST00000535818 NDUFC1O43677 76 aa10.27□□□□□ -0.77
VPS37C-202ENST00000535818 KRTAP3-3Q9BYR6 98 aa10.27□□□□□ -0.77
VPS37C-202ENST00000535818 SSPOA2VEC9 5147 aa10.24□□□□□ -0.77
VPS37C-202ENST00000535818 DMAC1Q96GE9 116 aa10.19□□□□□ -0.78
VPS37C-202ENST00000535818 KRTAP19-1Q8IUB9 90 aa10.17□□□□□ -0.78
VPS37C-202ENST00000535818 SERP2Q8N6R1 65 aa10.17□□□□□ -0.78
VPS37C-202ENST00000535818 H0YAA0 97 aa10.08□□□□□ -0.8
VPS37C-202ENST00000535818 SNURFQ9Y675 71 aa10.08□□□□□ -0.8
VPS37C-202ENST00000535818 ACYP2P14621 99 aa10.07□□□□□ -0.8
VPS37C-202ENST00000535818 C20orf197Q8N268 126 aa10.07□□□□□ -0.8
VPS37C-202ENST00000535818 KRTAP19-6Q3LI70 58 aa10.03□□□□□ -0.8
VPS37C-202ENST00000535818 CRIPTQ9P021 101 aa10.01□□□□□ -0.81
VPS37C-202ENST00000535818 SPRR2GQ9BYE4 73 aa10□□□□□ -0.81
VPS37C-202ENST00000535818 SPANXA2-OT1Q8N9U9 137 aa9.99□□□□□ -0.81
VPS37C-202ENST00000535818 FCGBPQ9Y6R7 5405 aaPredicted RBP9.97□□□□□ -0.81
VPS37C-202ENST00000535818 SPTSSBQ8NFR3 76 aa9.97□□□□□ -0.81
VPS37C-202ENST00000535818 COX7CP15954 63 aa9.95□□□□□ -0.82
VPS37C-202ENST00000535818 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.94□□□□□ -0.82
VPS37C-202ENST00000535818 Q5VV11 94 aa9.94□□□□□ -0.82
VPS37C-202ENST00000535818 ADM2Q7Z4H4 148 aa9.93□□□□□ -0.82
VPS37C-202ENST00000535818 CHKB-CPT1BH3BT56 60 aa9.91□□□□□ -0.82
VPS37C-202ENST00000535818 KRTAP19-8Q3LI54 63 aa9.89□□□□□ -0.83
VPS37C-202ENST00000535818 MT1BP07438 61 aa9.86□□□□□ -0.83
VPS37C-202ENST00000535818 ANAPC13Q9BS18 74 aa9.81□□□□□ -0.84
VPS37C-202ENST00000535818 KRTAP9-7A8MTY7 169 aa9.76□□□□□ -0.85
VPS37C-202ENST00000535818 A6NN06 94 aa9.72□□□□□ -0.85
VPS37C-202ENST00000535818 P0C880 135 aa9.71□□□□□ -0.86
VPS37C-202ENST00000535818 R4GN34 69 aa9.71□□□□□ -0.86
VPS37C-202ENST00000535818 H7BZZ5 65 aa9.68□□□□□ -0.86
VPS37C-202ENST00000535818 COA5Q86WW8 74 aa9.64□□□□□ -0.87
VPS37C-202ENST00000535818 MACF1Q9UPN3 7388 aaKnown RBP9.64□□□□□ -0.87
VPS37C-202ENST00000535818 KRTAP3-2Q9BYR7 98 aa9.63□□□□□ -0.87
VPS37C-202ENST00000535818 M0QZ58 72 aa9.61□□□□□ -0.87
VPS37C-202ENST00000535818 KRTAP10-5P60370 271 aa9.6□□□□□ -0.87
VPS37C-202ENST00000535818 CYSTM1Q9H1C7 97 aa9.58□□□□□ -0.88
VPS37C-202ENST00000535818 PLAC4Q8WY50 150 aa9.51□□□□□ -0.89
VPS37C-202ENST00000535818 CCDC179H3BU77 68 aa9.5□□□□□ -0.89
VPS37C-202ENST00000535818 SEC61GP60059 68 aa9.48□□□□□ -0.89
VPS37C-202ENST00000535818 LINC01554Q52M75 96 aa9.48□□□□□ -0.89
VPS37C-202ENST00000535818 ATP5EP56381 51 aaPredicted RBP9.47□□□□□ -0.89
VPS37C-202ENST00000535818 SYNE2Q8WXH0 6885 aaKnown RBP9.46□□□□□ -0.9
VPS37C-202ENST00000535818 SERP1Q9Y6X1 66 aa9.42□□□□□ -0.9
VPS37C-202ENST00000535818 PRO2289Q9P1D8 64 aa9.39□□□□□ -0.91
VPS37C-202ENST00000535818 KRTAP6-3Q3LI67 103 aa9.38□□□□□ -0.91
VPS37C-202ENST00000535818 MT1XP80297 61 aa9.31□□□□□ -0.92
VPS37C-202ENST00000535818 TMEM258P61165 79 aa9.3□□□□□ -0.92
VPS37C-202ENST00000535818 A0A1B0GU69 56 aa9.2□□□□□ -0.94
VPS37C-202ENST00000535818 A0A1B0GU33 70 aa9.17□□□□□ -0.94
VPS37C-202ENST00000535818 KRTAP13-4Q3LI77 160 aa9.16□□□□□ -0.94
VPS37C-202ENST00000535818 PRR15LQ9BU68 103 aa9.11□□□□□ -0.95
VPS37C-202ENST00000535818 KRTAP12-2P59991 146 aa9.04□□□□□ -0.96
VPS37C-202ENST00000535818 KRTAP5-9P26371 169 aa9.03□□□□□ -0.96
VPS37C-202ENST00000535818 SPATA8Q6RVD6 105 aa9.01□□□□□ -0.97
VPS37C-202ENST00000535818 CAMK2N1Q7Z7J9 78 aa9□□□□□ -0.97
VPS37C-202ENST00000535818 A0A0D9SG42 100 aa8.99□□□□□ -0.97
VPS37C-202ENST00000535818 LINC01558Q9Y6Z2 57 aa8.99□□□□□ -0.97
VPS37C-202ENST00000535818 SMIM26A0A096LP01 95 aa8.98□□□□□ -0.97
VPS37C-202ENST00000535818 KRTAP8-1Q8IUC2 63 aa8.93□□□□□ -0.98
VPS37C-202ENST00000535818 KMT2DO14686 5537 aa8.92□□□□□ -0.98
VPS37C-202ENST00000535818 MUC12Q9UKN1 5478 aa8.91□□□□□ -0.98
VPS37C-202ENST00000535818 KRTAP10-7P60409 375 aaPredicted RBP8.9□□□□□ -0.98
VPS37C-202ENST00000535818 SPINT4Q6UDR6 99 aa8.88□□□□□ -0.99
VPS37C-202ENST00000535818 SPRR2FQ96RM1 72 aa8.88□□□□□ -0.99
VPS37C-202ENST00000535818 NEBP20929 6669 aa8.86□□□□□ -0.99
VPS37C-202ENST00000535818 KRTAP10-12P60413 245 aa8.84□□□□□ -0.99
VPS37C-202ENST00000535818 KRTAP4-8A0A0G2JLE6 195 aa8.83□□□□□ -1
VPS37C-202ENST00000535818 KRTAP4-8Q9BYQ9 185 aa8.83□□□□□ -1
VPS37C-202ENST00000535818 V9GYY9 64 aa8.81□□□□□ -1
VPS37C-202ENST00000535818 KRTAP12-1P59990 96 aa8.8□□□□□ -1
VPS37C-202ENST00000535818 UQCR11O14957 56 aa8.76□□□□□ -1.01
VPS37C-202ENST00000535818 PCP4P48539 62 aa8.74□□□□□ -1.01
VPS37C-202ENST00000535818 A8MU10 97 aa8.73□□□□□ -1.01
VPS37C-202ENST00000535818 MDN1Q9NU22 5596 aa8.7□□□□□ -1.02
VPS37C-202ENST00000535818 SPRR2EP22531 72 aa8.7□□□□□ -1.02
VPS37C-202ENST00000535818 SPRR2BP35325 72 aa8.7□□□□□ -1.02
VPS37C-202ENST00000535818 SPRR2AP35326 72 aa8.7□□□□□ -1.02
VPS37C-202ENST00000535818 Q1T7F1 81 aa8.65□□□□□ -1.02
VPS37C-202ENST00000535818 KRTAP20-1Q3LI63 56 aa8.6□□□□□ -1.03
VPS37C-202ENST00000535818 LCE1AQ5T7P2 110 aa8.57□□□□□ -1.04
VPS37C-202ENST00000535818 MIR22HGQ0VDD5 57 aa8.56□□□□□ -1.04
VPS37C-202ENST00000535818 PSPHP1O15172 72 aa8.55□□□□□ -1.04
VPS37C-202ENST00000535818 RPS28P62857 69 aaKnown RBP8.54□□□□□ -1.04
VPS37C-202ENST00000535818 K7ERS5 55 aa8.46□□□□□ -1.06
VPS37C-202ENST00000535818 KRTAP2-3P0C7H8 128 aa8.42□□□□□ -1.06
VPS37C-202ENST00000535818 KRTAP2-4Q9BYR9 128 aa8.42□□□□□ -1.06
VPS37C-202ENST00000535818 SPRR2DP22532 72 aa8.4□□□□□ -1.06
VPS37C-202ENST00000535818 TNP1P09430 55 aa8.39□□□□□ -1.07
VPS37C-202ENST00000535818 A6NED7 52 aa8.36□□□□□ -1.07
VPS37C-202ENST00000535818 C10orf95Q9H7T3 257 aa8.34□□□□□ -1.07
VPS37C-202ENST00000535818 KRTAP19-7Q3SYF9 63 aa8.31□□□□□ -1.08
VPS37C-202ENST00000535818 MT1EP04732 61 aa8.24□□□□□ -1.09
VPS37C-202ENST00000535818 KRTAP19-5Q3LI72 72 aa8.2□□□□□ -1.1
VPS37C-202ENST00000535818 KRTAP2-2Q9BYT5 123 aa8.18□□□□□ -1.1
VPS37C-202ENST00000535818 KRTAP2-1Q9BYU5 128 aa8.18□□□□□ -1.1
VPS37C-202ENST00000535818 LCE3AQ5TA76 89 aa8.15□□□□□ -1.1
VPS37C-202ENST00000535818 LCE3BQ5TA77 95 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms