RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 KLKP1Q107X0 134 aa10.19□□□□□ -0.78
SSPN-204ENST00000535504 LCE2BO14633 110 aa10.17□□□□□ -0.78
SSPN-204ENST00000535504 TRAV7A0A075B6U4 112 aa10.1□□□□□ -0.79
SSPN-204ENST00000535504 KRTAP3-3Q9BYR6 98 aa10.09□□□□□ -0.79
SSPN-204ENST00000535504 USH2AO75445 5202 aa10.06□□□□□ -0.8
SSPN-204ENST00000535504 DMAC1Q96GE9 116 aa9.98□□□□□ -0.81
SSPN-204ENST00000535504 KRTAP19-1Q8IUB9 90 aa9.95□□□□□ -0.82
SSPN-204ENST00000535504 CRIPTQ9P021 101 aa9.95□□□□□ -0.82
SSPN-204ENST00000535504 H0YAA0 97 aa9.93□□□□□ -0.82
SSPN-204ENST00000535504 SSPOA2VEC9 5147 aa9.9□□□□□ -0.82
SSPN-204ENST00000535504 ACYP2P14621 99 aa9.89□□□□□ -0.83
SSPN-204ENST00000535504 SERP2Q8N6R1 65 aa9.87□□□□□ -0.83
SSPN-204ENST00000535504 Q5VV11 94 aa9.85□□□□□ -0.83
SSPN-204ENST00000535504 ADM2Q7Z4H4 148 aa9.85□□□□□ -0.83
SSPN-204ENST00000535504 SPRR2GQ9BYE4 73 aa9.85□□□□□ -0.83
SSPN-204ENST00000535504 SNURFQ9Y675 71 aa9.85□□□□□ -0.83
SSPN-204ENST00000535504 KRTAP19-6Q3LI70 58 aa9.84□□□□□ -0.83
SSPN-204ENST00000535504 C20orf197Q8N268 126 aa9.82□□□□□ -0.84
SSPN-204ENST00000535504 SPTSSBQ8NFR3 76 aa9.82□□□□□ -0.84
SSPN-204ENST00000535504 CHKB-CPT1BH3BT56 60 aa9.79□□□□□ -0.84
SSPN-204ENST00000535504 KRTAP19-8Q3LI54 63 aa9.73□□□□□ -0.85
SSPN-204ENST00000535504 SPANXA2-OT1Q8N9U9 137 aa9.72□□□□□ -0.85
SSPN-204ENST00000535504 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.71□□□□□ -0.86
SSPN-204ENST00000535504 FCGBPQ9Y6R7 5405 aaPredicted RBP9.68□□□□□ -0.86
SSPN-204ENST00000535504 R4GN34 69 aa9.66□□□□□ -0.86
SSPN-204ENST00000535504 MT1BP07438 61 aa9.65□□□□□ -0.86
SSPN-204ENST00000535504 A6NN06 94 aa9.62□□□□□ -0.87
SSPN-204ENST00000535504 COX7CP15954 63 aa9.62□□□□□ -0.87
SSPN-204ENST00000535504 M0QZ58 72 aa9.56□□□□□ -0.88
SSPN-204ENST00000535504 P0C880 135 aa9.56□□□□□ -0.88
SSPN-204ENST00000535504 KRTAP9-7A8MTY7 169 aa9.55□□□□□ -0.88
SSPN-204ENST00000535504 PLAC4Q8WY50 150 aa9.5□□□□□ -0.89
SSPN-204ENST00000535504 ANAPC13Q9BS18 74 aa9.48□□□□□ -0.89
SSPN-204ENST00000535504 KRTAP3-2Q9BYR7 98 aa9.47□□□□□ -0.89
SSPN-204ENST00000535504 KRTAP10-5P60370 271 aa9.44□□□□□ -0.9
SSPN-204ENST00000535504 LINC01554Q52M75 96 aa9.42□□□□□ -0.9
SSPN-204ENST00000535504 COA5Q86WW8 74 aa9.42□□□□□ -0.9
SSPN-204ENST00000535504 PRO2289Q9P1D8 64 aa9.39□□□□□ -0.91
SSPN-204ENST00000535504 MACF1Q9UPN3 7388 aaKnown RBP9.37□□□□□ -0.91
SSPN-204ENST00000535504 H7BZZ5 65 aa9.36□□□□□ -0.91
SSPN-204ENST00000535504 SEC61GP60059 68 aa9.34□□□□□ -0.91
SSPN-204ENST00000535504 SERP1Q9Y6X1 66 aa9.28□□□□□ -0.92
SSPN-204ENST00000535504 CYSTM1Q9H1C7 97 aa9.26□□□□□ -0.93
SSPN-204ENST00000535504 SYNE2Q8WXH0 6885 aaKnown RBP9.22□□□□□ -0.93
SSPN-204ENST00000535504 KRTAP6-3Q3LI67 103 aa9.2□□□□□ -0.94
SSPN-204ENST00000535504 CCDC179H3BU77 68 aa9.16□□□□□ -0.94
SSPN-204ENST00000535504 ATP5EP56381 51 aaPredicted RBP9.14□□□□□ -0.95
SSPN-204ENST00000535504 MT1XP80297 61 aa9.13□□□□□ -0.95
SSPN-204ENST00000535504 A0A1B0GU69 56 aa9.02□□□□□ -0.97
SSPN-204ENST00000535504 A0A1B0GU33 70 aa9.01□□□□□ -0.97
SSPN-204ENST00000535504 KRTAP13-4Q3LI77 160 aa8.99□□□□□ -0.97
SSPN-204ENST00000535504 CAMK2N1Q7Z7J9 78 aa8.96□□□□□ -0.98
SSPN-204ENST00000535504 PCP4P48539 62 aa8.95□□□□□ -0.98
SSPN-204ENST00000535504 TMEM258P61165 79 aa8.95□□□□□ -0.98
SSPN-204ENST00000535504 KRTAP12-2P59991 146 aa8.92□□□□□ -0.98
SSPN-204ENST00000535504 PRR15LQ9BU68 103 aa8.92□□□□□ -0.98
SSPN-204ENST00000535504 A0A0D9SG42 100 aa8.91□□□□□ -0.98
SSPN-204ENST00000535504 SPATA8Q6RVD6 105 aa8.89□□□□□ -0.99
SSPN-204ENST00000535504 KRTAP5-9P26371 169 aa8.84□□□□□ -0.99
SSPN-204ENST00000535504 SMIM26A0A096LP01 95 aa8.83□□□□□ -1
SSPN-204ENST00000535504 KRTAP8-1Q8IUC2 63 aa8.82□□□□□ -1
SSPN-204ENST00000535504 SPINT4Q6UDR6 99 aa8.81□□□□□ -1
SSPN-204ENST00000535504 SPRR2FQ96RM1 72 aa8.74□□□□□ -1.01
SSPN-204ENST00000535504 KRTAP10-7P60409 375 aaPredicted RBP8.72□□□□□ -1.01
SSPN-204ENST00000535504 LINC01558Q9Y6Z2 57 aa8.72□□□□□ -1.01
SSPN-204ENST00000535504 KRTAP10-12P60413 245 aa8.69□□□□□ -1.02
SSPN-204ENST00000535504 NEBP20929 6669 aa8.65□□□□□ -1.02
SSPN-204ENST00000535504 KRTAP12-1P59990 96 aa8.64□□□□□ -1.03
SSPN-204ENST00000535504 KMT2DO14686 5537 aa8.64□□□□□ -1.03
SSPN-204ENST00000535504 MUC12Q9UKN1 5478 aa8.64□□□□□ -1.03
SSPN-204ENST00000535504 KRTAP4-8A0A0G2JLE6 195 aa8.62□□□□□ -1.03
SSPN-204ENST00000535504 KRTAP4-8Q9BYQ9 185 aa8.62□□□□□ -1.03
SSPN-204ENST00000535504 A8MU10 97 aa8.58□□□□□ -1.04
SSPN-204ENST00000535504 SPRR2EP22531 72 aa8.56□□□□□ -1.04
SSPN-204ENST00000535504 SPRR2BP35325 72 aa8.56□□□□□ -1.04
SSPN-204ENST00000535504 SPRR2AP35326 72 aa8.56□□□□□ -1.04
SSPN-204ENST00000535504 UQCR11O14957 56 aa8.55□□□□□ -1.04
SSPN-204ENST00000535504 V9GYY9 64 aa8.51□□□□□ -1.05
SSPN-204ENST00000535504 KRTAP20-1Q3LI63 56 aa8.45□□□□□ -1.06
SSPN-204ENST00000535504 MDN1Q9NU22 5596 aa8.42□□□□□ -1.06
SSPN-204ENST00000535504 LCE1AQ5T7P2 110 aa8.38□□□□□ -1.07
SSPN-204ENST00000535504 MIR22HGQ0VDD5 57 aa8.36□□□□□ -1.07
SSPN-204ENST00000535504 Q1T7F1 81 aa8.32□□□□□ -1.08
SSPN-204ENST00000535504 K7ERS5 55 aa8.31□□□□□ -1.08
SSPN-204ENST00000535504 TNP1P09430 55 aa8.31□□□□□ -1.08
SSPN-204ENST00000535504 PSPHP1O15172 72 aa8.3□□□□□ -1.08
SSPN-204ENST00000535504 KRTAP2-3P0C7H8 128 aa8.29□□□□□ -1.08
SSPN-204ENST00000535504 KRTAP2-4Q9BYR9 128 aa8.29□□□□□ -1.08
SSPN-204ENST00000535504 SPRR2DP22532 72 aa8.28□□□□□ -1.08
SSPN-204ENST00000535504 C10orf95Q9H7T3 257 aa8.21□□□□□ -1.1
SSPN-204ENST00000535504 RPS28P62857 69 aaKnown RBP8.14□□□□□ -1.11
SSPN-204ENST00000535504 KRTAP19-7Q3SYF9 63 aa8.13□□□□□ -1.11
SSPN-204ENST00000535504 A6NED7 52 aa8.12□□□□□ -1.11
SSPN-204ENST00000535504 MT1EP04732 61 aa8.09□□□□□ -1.11
SSPN-204ENST00000535504 KRTAP19-5Q3LI72 72 aa8.06□□□□□ -1.12
SSPN-204ENST00000535504 KRTAP2-2Q9BYT5 123 aa8.04□□□□□ -1.12
SSPN-204ENST00000535504 KRTAP2-1Q9BYU5 128 aa8.04□□□□□ -1.12
SSPN-204ENST00000535504 LCE3AQ5TA76 89 aa8.03□□□□□ -1.12
SSPN-204ENST00000535504 KRTAP19-3Q7Z4W3 81 aa8.02□□□□□ -1.13
SSPN-204ENST00000535504 LCE3BQ5TA77 95 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms