RNA–Protein interactions for RNA: ENST00000534062.1

RTL1-201, Transcript of retrotransposon Gag like 1, humanhuman

APPRIS P1 BASIC

Gene RTL1, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1-201ENST00000534062 MT1HL1P0DM35 61 aa5.32□□□□□ -1.56
RTL1-201ENST00000534062 BIRC6Q9NR09 4857 aa5.3□□□□□ -1.56
RTL1-201ENST00000534062 P0C880 135 aa5.28□□□□□ -1.56
RTL1-201ENST00000534062 DMAC1Q96GE9 116 aa5.28□□□□□ -1.56
RTL1-201ENST00000534062 KRTAP13-3Q3SY46 172 aa5.27□□□□□ -1.57
RTL1-201ENST00000534062 PKHD1L1Q86WI1 4243 aa5.27□□□□□ -1.57
RTL1-201ENST00000534062 KRTAP25-1Q3LHN0 102 aa5.27□□□□□ -1.57
RTL1-201ENST00000534062 HERC2O95714 4834 aa5.25□□□□□ -1.57
RTL1-201ENST00000534062 ABCA13Q86UQ4 5058 aa5.24□□□□□ -1.57
RTL1-201ENST00000534062 FAT3Q8TDW7 4589 aa5.23□□□□□ -1.57
RTL1-201ENST00000534062 KRTAP16-1A8MUX0 517 aa5.21□□□□□ -1.57
RTL1-201ENST00000534062 SEC61BP60468 96 aaKnown RBP5.21□□□□□ -1.58
RTL1-201ENST00000534062 A8MUU9 505 aa5.2□□□□□ -1.58
RTL1-201ENST00000534062 TNXBP22105 4242 aa5.2□□□□□ -1.58
RTL1-201ENST00000534062 CRIPTQ9P021 101 aa5.17□□□□□ -1.58
RTL1-201ENST00000534062 XP32Q5T750 250 aa5.15□□□□□ -1.59
RTL1-201ENST00000534062 C20orf166-AS1Q96NR2 134 aa5.14□□□□□ -1.59
RTL1-201ENST00000534062 H0YAA0 97 aa5.13□□□□□ -1.59
RTL1-201ENST00000534062 A0A0A0MQY5 61 aa5.12□□□□□ -1.59
RTL1-201ENST00000534062 S4R3F8 94 aa5.1□□□□□ -1.59
RTL1-201ENST00000534062 RPL37P61927 97 aaKnown RBP5.1□□□□□ -1.59
RTL1-201ENST00000534062 TPRXLQ17RH7 258 aa5.1□□□□□ -1.59
RTL1-201ENST00000534062 M0R2T5 61 aa5.09□□□□□ -1.59
RTL1-201ENST00000534062 PCLOQ9Y6V0 5065 aa5.07□□□□□ -1.6
RTL1-201ENST00000534062 A0A0D9SG42 100 aa5.07□□□□□ -1.6
RTL1-201ENST00000534062 NDUFAF8A1L188 74 aa5.05□□□□□ -1.6
RTL1-201ENST00000534062 A0A1B0GU33 70 aa5.04□□□□□ -1.6
RTL1-201ENST00000534062 LPAP08519 4548 aa5.03□□□□□ -1.6
RTL1-201ENST00000534062 LRP2P98164 4655 aa5.02□□□□□ -1.61
RTL1-201ENST00000534062 SPINT4Q6UDR6 99 aa5.01□□□□□ -1.61
RTL1-201ENST00000534062 HERC1Q15751 4861 aa5.01□□□□□ -1.61
RTL1-201ENST00000534062 H1FX-AS1Q4G0G2 97 aa4.97□□□□□ -1.61
RTL1-201ENST00000534062 KRTAP15-1Q3LI76 137 aa4.95□□□□□ -1.62
RTL1-201ENST00000534062 R4GN34 69 aa4.93□□□□□ -1.62
RTL1-201ENST00000534062 C10orf95Q9H7T3 257 aa4.88□□□□□ -1.63
RTL1-201ENST00000534062 CAMK2N1Q7Z7J9 78 aa4.87□□□□□ -1.63
RTL1-201ENST00000534062 M0QZ58 72 aa4.86□□□□□ -1.63
RTL1-201ENST00000534062 KRTAP3-1Q9BYR8 98 aa4.84□□□□□ -1.63
RTL1-201ENST00000534062 KRTAP4-1Q9BYQ7 146 aa4.83□□□□□ -1.64
RTL1-201ENST00000534062 HMCN2Q8NDA2 5059 aa4.82□□□□□ -1.64
RTL1-201ENST00000534062 MUC2Q02817 5179 aa4.78□□□□□ -1.64
RTL1-201ENST00000534062 LUZP6Q538Z0 58 aa4.75□□□□□ -1.65
RTL1-201ENST00000534062 UBR4Q5T4S7 5183 aa4.73□□□□□ -1.65
RTL1-201ENST00000534062 KRTAP13-4Q3LI77 160 aa4.72□□□□□ -1.65
RTL1-201ENST00000534062 RNF213Q63HN8 5207 aa4.71□□□□□ -1.65
RTL1-201ENST00000534062 PLAC4Q8WY50 150 aa4.66□□□□□ -1.66
RTL1-201ENST00000534062 KRTAP10-6P60371 365 aaPredicted RBP4.65□□□□□ -1.66
RTL1-201ENST00000534062 KRTAP3-3Q9BYR6 98 aa4.64□□□□□ -1.67
RTL1-201ENST00000534062 MUC17Q685J3 4493 aa4.64□□□□□ -1.67
RTL1-201ENST00000534062 KRTAP12-2P59991 146 aa4.6□□□□□ -1.67
RTL1-201ENST00000534062 FAT4Q6V0I7 4981 aa4.59□□□□□ -1.67
RTL1-201ENST00000534062 KRTAP3-2Q9BYR7 98 aa4.58□□□□□ -1.68
RTL1-201ENST00000534062 KRTAP10-10P60014 251 aa4.56□□□□□ -1.68
RTL1-201ENST00000534062 KRTAP19-2Q3LHN2 52 aa4.55□□□□□ -1.68
RTL1-201ENST00000534062 LCE2CQ5TA81 110 aa4.52□□□□□ -1.69
RTL1-201ENST00000534062 MT1HP80294 61 aa4.5□□□□□ -1.69
RTL1-201ENST00000534062 KRTAP12-1P59990 96 aa4.5□□□□□ -1.69
RTL1-201ENST00000534062 FLGP20930 4061 aaPredicted RBP4.47□□□□□ -1.69
RTL1-201ENST00000534062 LORP23490 312 aaPredicted RBP4.42□□□□□ -1.7
RTL1-201ENST00000534062 TNP1P09430 55 aa4.41□□□□□ -1.7
RTL1-201ENST00000534062 MT2AP02795 61 aa4.32□□□□□ -1.72
RTL1-201ENST00000534062 MT1FP04733 61 aa4.31□□□□□ -1.72
RTL1-201ENST00000534062 KRTAP9-8Q9BYQ0 159 aa4.28□□□□□ -1.72
RTL1-201ENST00000534062 PRO2289Q9P1D8 64 aa4.26□□□□□ -1.73
RTL1-201ENST00000534062 LCE2AQ5TA79 106 aaPredicted RBP4.24□□□□□ -1.73
RTL1-201ENST00000534062 PP632Q6XCG6 107 aa4.22□□□□□ -1.73
RTL1-201ENST00000534062 KRTAP19-1Q8IUB9 90 aa4.18□□□□□ -1.74
RTL1-201ENST00000534062 SPRR2GQ9BYE4 73 aa4.17□□□□□ -1.74
RTL1-201ENST00000534062 KRTAP9-3Q9BYQ3 159 aa4.13□□□□□ -1.75
RTL1-201ENST00000534062 FSIP2Q5CZC0 6907 aa4.07□□□□□ -1.76
RTL1-201ENST00000534062 SPRR5A0A1B0GTR4 108 aa4.07□□□□□ -1.76
RTL1-201ENST00000534062 LCE2BO14633 110 aa4.05□□□□□ -1.76
RTL1-201ENST00000534062 MT1BP07438 61 aa4.03□□□□□ -1.76
RTL1-201ENST00000534062 KRTAP19-8Q3LI54 63 aa4.03□□□□□ -1.76
RTL1-201ENST00000534062 USH2AO75445 5202 aa4.03□□□□□ -1.76
RTL1-201ENST00000534062 KRTAP10-12P60413 245 aa3.91□□□□□ -1.78
RTL1-201ENST00000534062 MT1XP80297 61 aa3.91□□□□□ -1.78
RTL1-201ENST00000534062 INE1O15225 51 aa3.9□□□□□ -1.78
RTL1-201ENST00000534062 KRTAP10-5P60370 271 aa3.89□□□□□ -1.79
RTL1-201ENST00000534062 LCE2DQ5TA82 110 aaPredicted RBP3.87□□□□□ -1.79
RTL1-201ENST00000534062 KRTAP9-2Q9BYQ4 174 aa3.84□□□□□ -1.8
RTL1-201ENST00000534062 SSPOA2VEC9 5147 aa3.82□□□□□ -1.8
RTL1-201ENST00000534062 LCE3AQ5TA76 89 aa3.81□□□□□ -1.8
RTL1-201ENST00000534062 KRTAP10-7P60409 375 aaPredicted RBP3.81□□□□□ -1.8
RTL1-201ENST00000534062 KRTAP23-1A1A580 65 aa3.79□□□□□ -1.8
RTL1-201ENST00000534062 KRTAP12-3P60328 96 aa3.77□□□□□ -1.81
RTL1-201ENST00000534062 KRTAP19-6Q3LI70 58 aa3.75□□□□□ -1.81
RTL1-201ENST00000534062 KMT2DO14686 5537 aa3.72□□□□□ -1.81
RTL1-201ENST00000534062 KRTAP4-8A0A0G2JLE6 195 aa3.71□□□□□ -1.82
RTL1-201ENST00000534062 KRTAP4-8Q9BYQ9 185 aa3.71□□□□□ -1.82
RTL1-201ENST00000534062 CRCT1Q9UGL9 99 aa3.7□□□□□ -1.82
RTL1-201ENST00000534062 KRTAP8-1Q8IUC2 63 aa3.68□□□□□ -1.82
RTL1-201ENST00000534062 FCGBPQ9Y6R7 5405 aaPredicted RBP3.68□□□□□ -1.82
RTL1-201ENST00000534062 KRTAP19-5Q3LI72 72 aa3.6□□□□□ -1.83
RTL1-201ENST00000534062 MACF1Q9UPN3 7388 aaKnown RBP3.54□□□□□ -1.84
RTL1-201ENST00000534062 KRTAP9-6A0A140TA67 174 aa3.53□□□□□ -1.84
RTL1-201ENST00000534062 SPRR2FQ96RM1 72 aa3.51□□□□□ -1.85
RTL1-201ENST00000534062 SYNE2Q8WXH0 6885 aaKnown RBP3.49□□□□□ -1.85
RTL1-201ENST00000534062 KRTAP19-7Q3SYF9 63 aa3.47□□□□□ -1.85
RTL1-201ENST00000534062 MUC12Q9UKN1 5478 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms