RNA–Protein interactions for RNA: ENST00000533957.1

CLNS1A-212, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 4

Gene CLNS1A, Length 369 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-212ENST00000533957 PSPHP1O15172 72 aa3.37□□□□□ -1.87
CLNS1A-212ENST00000533957 Q6ZSA8 131 aa3.36□□□□□ -1.87
CLNS1A-212ENST00000533957 NOTCH2NLQ7Z3S9 236 aa3.36□□□□□ -1.87
CLNS1A-212ENST00000533957 DMAC1Q96GE9 116 aa3.36□□□□□ -1.87
CLNS1A-212ENST00000533957 PKHD1P08F94 4074 aa3.35□□□□□ -1.87
CLNS1A-212ENST00000533957 A6NED7 52 aa3.35□□□□□ -1.87
CLNS1A-212ENST00000533957 PRR4Q16378 134 aa3.35□□□□□ -1.87
CLNS1A-212ENST00000533957 KRTAP13-3Q3SY46 172 aa3.35□□□□□ -1.87
CLNS1A-212ENST00000533957 CIRBP-AS1Q8TBR5 109 aa3.35□□□□□ -1.87
CLNS1A-212ENST00000533957 OBSCNQ5VST9 7968 aa3.35□□□□□ -1.87
CLNS1A-212ENST00000533957 LRP1BQ9NZR2 4599 aa3.34□□□□□ -1.87
CLNS1A-212ENST00000533957 KRTAP16-1A8MUX0 517 aa3.34□□□□□ -1.87
CLNS1A-212ENST00000533957 HRES1P13985 223 aa3.34□□□□□ -1.87
CLNS1A-212ENST00000533957 SPTSSBQ8NFR3 76 aa3.34□□□□□ -1.87
CLNS1A-212ENST00000533957 APOBP04114 4563 aaKnown RBP3.34□□□□□ -1.87
CLNS1A-212ENST00000533957 PCOTHQ58A44 107 aa3.33□□□□□ -1.88
CLNS1A-212ENST00000533957 SPINK6Q6UWN8 80 aa3.33□□□□□ -1.88
CLNS1A-212ENST00000533957 RYR1P21817 5038 aa3.33□□□□□ -1.88
CLNS1A-212ENST00000533957 DNAH8Q96JB1 4490 aa3.32□□□□□ -1.88
CLNS1A-212ENST00000533957 HERC2O95714 4834 aa3.32□□□□□ -1.88
CLNS1A-212ENST00000533957 KRTAP4-3Q9BYR4 195 aa3.32□□□□□ -1.88
CLNS1A-212ENST00000533957 KIAA1109Q2LD37 5005 aa3.32□□□□□ -1.88
CLNS1A-212ENST00000533957 Q5W150 140 aa3.3□□□□□ -1.88
CLNS1A-212ENST00000533957 KTN1-AS1Q86SY8 53 aa3.3□□□□□ -1.88
CLNS1A-212ENST00000533957 A0A1B0GU69 56 aa3.29□□□□□ -1.88
CLNS1A-212ENST00000533957 UQCR11O14957 56 aa3.29□□□□□ -1.88
CLNS1A-212ENST00000533957 SEC61GP60059 68 aa3.29□□□□□ -1.88
CLNS1A-212ENST00000533957 HSPG2P98160 4391 aa3.28□□□□□ -1.88
CLNS1A-212ENST00000533957 LCA10Q71F78 164 aa3.28□□□□□ -1.88
CLNS1A-212ENST00000533957 TYMSOSQ8TAI1 123 aa3.28□□□□□ -1.88
CLNS1A-212ENST00000533957 SPATA8Q6RVD6 105 aa3.27□□□□□ -1.89
CLNS1A-212ENST00000533957 ANAPC11Q9NYG5 84 aa3.27□□□□□ -1.89
CLNS1A-212ENST00000533957 KRTAP13-2Q52LG2 175 aa3.26□□□□□ -1.89
CLNS1A-212ENST00000533957 LCE3EQ5T5B0 92 aa3.26□□□□□ -1.89
CLNS1A-212ENST00000533957 C7orf65Q6ZTY9 151 aa3.26□□□□□ -1.89
CLNS1A-212ENST00000533957 A6NN06 94 aa3.25□□□□□ -1.89
CLNS1A-212ENST00000533957 KRTAP1-4P0C5Y4 121 aa3.25□□□□□ -1.89
CLNS1A-212ENST00000533957 NDUFAF8A1L188 74 aa3.24□□□□□ -1.89
CLNS1A-212ENST00000533957 LCE3AQ5TA76 89 aa3.24□□□□□ -1.89
CLNS1A-212ENST00000533957 LINC00304Q8N9R0 145 aa3.24□□□□□ -1.89
CLNS1A-212ENST00000533957 ABCA13Q86UQ4 5058 aa3.24□□□□□ -1.89
CLNS1A-212ENST00000533957 FAT1Q14517 4588 aa3.22□□□□□ -1.89
CLNS1A-212ENST00000533957 KRTAP10-1P60331 282 aa3.22□□□□□ -1.89
CLNS1A-212ENST00000533957 C20orf166-AS1Q96NR2 134 aa3.22□□□□□ -1.89
CLNS1A-212ENST00000533957 PCLOQ9Y6V0 5065 aa3.22□□□□□ -1.89
CLNS1A-212ENST00000533957 MIR22HGQ0VDD5 57 aa3.21□□□□□ -1.9
CLNS1A-212ENST00000533957 A8MUU9 505 aa3.2□□□□□ -1.9
CLNS1A-212ENST00000533957 SPINK7P58062 85 aa3.2□□□□□ -1.9
CLNS1A-212ENST00000533957 RETNLBQ9BQ08 111 aa3.18□□□□□ -1.9
CLNS1A-212ENST00000533957 PKHD1L1Q86WI1 4243 aa3.18□□□□□ -1.9
CLNS1A-212ENST00000533957 VPS13BQ7Z7G8 4022 aa3.17□□□□□ -1.9
CLNS1A-212ENST00000533957 KRTAP12-2P59991 146 aa3.16□□□□□ -1.9
CLNS1A-212ENST00000533957 MYCBP2O75592 4640 aa3.15□□□□□ -1.91
CLNS1A-212ENST00000533957 K7ERS5 55 aa3.15□□□□□ -1.91
CLNS1A-212ENST00000533957 SRRM2Q9UQ35 2752 aaKnown RBP3.15□□□□□ -1.91
CLNS1A-212ENST00000533957 RBM12B-AS1Q9P1G2 102 aa3.14□□□□□ -1.91
CLNS1A-212ENST00000533957 FAT3Q8TDW7 4589 aa3.14□□□□□ -1.91
CLNS1A-212ENST00000533957 KRTAP10-8P60410 259 aa3.13□□□□□ -1.91
CLNS1A-212ENST00000533957 Q5VSD8 79 aa3.13□□□□□ -1.91
CLNS1A-212ENST00000533957 COX6B2Q6YFQ2 88 aa3.12□□□□□ -1.91
CLNS1A-212ENST00000533957 A0A1B0GU33 70 aa3.11□□□□□ -1.91
CLNS1A-212ENST00000533957 A8MU10 97 aa3.11□□□□□ -1.91
CLNS1A-212ENST00000533957 SMR3BP02814 79 aaPredicted RBP3.11□□□□□ -1.91
CLNS1A-212ENST00000533957 KRTAP10-4P60372 401 aaPredicted RBP3.11□□□□□ -1.91
CLNS1A-212ENST00000533957 KRTAP5-2Q701N4 177 aa3.1□□□□□ -1.91
CLNS1A-212ENST00000533957 LRP1Q07954 4544 aaKnown RBP3.09□□□□□ -1.91
CLNS1A-212ENST00000533957 PRAC1Q96KF2 57 aa3.07□□□□□ -1.92
CLNS1A-212ENST00000533957 H1FX-AS1Q4G0G2 97 aa3.06□□□□□ -1.92
CLNS1A-212ENST00000533957 LINC01554Q52M75 96 aa3.06□□□□□ -1.92
CLNS1A-212ENST00000533957 TNXBP22105 4242 aa3.05□□□□□ -1.92
CLNS1A-212ENST00000533957 FLG2Q5D862 2391 aaPredicted RBP3.04□□□□□ -1.92
CLNS1A-212ENST00000533957 RPL37P61927 97 aaKnown RBP3.03□□□□□ -1.92
CLNS1A-212ENST00000533957 HERC1Q15751 4861 aa3.03□□□□□ -1.93
CLNS1A-212ENST00000533957 C9orf92A6NGG3 77 aa3.02□□□□□ -1.93
CLNS1A-212ENST00000533957 HMCN2Q8NDA2 5059 aa3□□□□□ -1.93
CLNS1A-212ENST00000533957 H0YAA0 97 aa2.99□□□□□ -1.93
CLNS1A-212ENST00000533957 MT1HL1P0DM35 61 aa2.99□□□□□ -1.93
CLNS1A-212ENST00000533957 KRTAP5-5Q701N2 237 aaPredicted RBP2.99□□□□□ -1.93
CLNS1A-212ENST00000533957 DMBT1Q9UGM3 2413 aaPredicted RBP2.99□□□□□ -1.93
CLNS1A-212ENST00000533957 M0QZ58 72 aa2.97□□□□□ -1.93
CLNS1A-212ENST00000533957 KRTAP25-1Q3LHN0 102 aa2.97□□□□□ -1.93
CLNS1A-212ENST00000533957 S4R3F8 94 aa2.97□□□□□ -1.93
CLNS1A-212ENST00000533957 TPRXLQ17RH7 258 aa2.96□□□□□ -1.94
CLNS1A-212ENST00000533957 ROMO1P60602 79 aa2.95□□□□□ -1.94
CLNS1A-212ENST00000533957 CSAG1Q6PB30 78 aa2.95□□□□□ -1.94
CLNS1A-212ENST00000533957 ADM2Q7Z4H4 148 aa2.9□□□□□ -1.95
CLNS1A-212ENST00000533957 CRIPTQ9P021 101 aa2.89□□□□□ -1.95
CLNS1A-212ENST00000533957 LPAP08519 4548 aa2.89□□□□□ -1.95
CLNS1A-212ENST00000533957 UBR4Q5T4S7 5183 aa2.88□□□□□ -1.95
CLNS1A-212ENST00000533957 LRP2P98164 4655 aa2.88□□□□□ -1.95
CLNS1A-212ENST00000533957 MUC17Q685J3 4493 aa2.85□□□□□ -1.95
CLNS1A-212ENST00000533957 LCE1CQ5T751 118 aa2.85□□□□□ -1.95
CLNS1A-212ENST00000533957 LCE1BQ5T7P3 118 aa2.85□□□□□ -1.95
CLNS1A-212ENST00000533957 RNF213Q63HN8 5207 aa2.8□□□□□ -1.96
CLNS1A-212ENST00000533957 P0C880 135 aa2.79□□□□□ -1.96
CLNS1A-212ENST00000533957 A0A0D9SG42 100 aa2.78□□□□□ -1.96
CLNS1A-212ENST00000533957 KRTAP12-1P59990 96 aa2.78□□□□□ -1.96
CLNS1A-212ENST00000533957 KRTAP13-4Q3LI77 160 aa2.78□□□□□ -1.96
CLNS1A-212ENST00000533957 PP632Q6XCG6 107 aa2.78□□□□□ -1.96
CLNS1A-212ENST00000533957 R4GN34 69 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms