RNA–Protein interactions for RNA: ENST00000533507.5

NDUFS3-211, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2

Gene NDUFS3, Length 1,769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-211ENST00000533507 COA5Q86WW8 74 aa13.07□□□□□ -0.32
NDUFS3-211ENST00000533507 S4R3F8 94 aa13.04□□□□□ -0.32
NDUFS3-211ENST00000533507 FLGP20930 4061 aaPredicted RBP13□□□□□ -0.33
NDUFS3-211ENST00000533507 LCA10Q71F78 164 aa12.98□□□□□ -0.33
NDUFS3-211ENST00000533507 CHKB-CPT1BH3BT56 60 aa12.97□□□□□ -0.33
NDUFS3-211ENST00000533507 M0R2T5 61 aa12.95□□□□□ -0.34
NDUFS3-211ENST00000533507 MT1HP80294 61 aa12.95□□□□□ -0.34
NDUFS3-211ENST00000533507 SMIM26A0A096LP01 95 aa12.85□□□□□ -0.35
NDUFS3-211ENST00000533507 KRTAP3-3Q9BYR6 98 aa12.84□□□□□ -0.35
NDUFS3-211ENST00000533507 CSAG1Q6PB30 78 aa12.81□□□□□ -0.36
NDUFS3-211ENST00000533507 SPTSSBQ8NFR3 76 aa12.74□□□□□ -0.37
NDUFS3-211ENST00000533507 LCE2AQ5TA79 106 aaPredicted RBP12.69□□□□□ -0.38
NDUFS3-211ENST00000533507 Q1T7F1 81 aa12.63□□□□□ -0.39
NDUFS3-211ENST00000533507 V9GYY9 64 aa12.57□□□□□ -0.4
NDUFS3-211ENST00000533507 KRTAP10-6P60371 365 aaPredicted RBP12.54□□□□□ -0.4
NDUFS3-211ENST00000533507 LINC01558Q9Y6Z2 57 aa12.54□□□□□ -0.4
NDUFS3-211ENST00000533507 LORP23490 312 aaPredicted RBP12.45□□□□□ -0.42
NDUFS3-211ENST00000533507 ADM2Q7Z4H4 148 aa12.43□□□□□ -0.42
NDUFS3-211ENST00000533507 PSPHP1O15172 72 aa12.4□□□□□ -0.42
NDUFS3-211ENST00000533507 PRR15LQ9BU68 103 aa12.4□□□□□ -0.42
NDUFS3-211ENST00000533507 KRTAP9-8Q9BYQ0 159 aa12.38□□□□□ -0.43
NDUFS3-211ENST00000533507 H0YAA0 97 aa12.36□□□□□ -0.43
NDUFS3-211ENST00000533507 SEC61GP60059 68 aa12.35□□□□□ -0.43
NDUFS3-211ENST00000533507 A0A1B0GU69 56 aa12.35□□□□□ -0.43
NDUFS3-211ENST00000533507 MT2AP02795 61 aa12.33□□□□□ -0.44
NDUFS3-211ENST00000533507 KRTAP10-10P60014 251 aa12.31□□□□□ -0.44
NDUFS3-211ENST00000533507 Q5VV11 94 aa12.3□□□□□ -0.44
NDUFS3-211ENST00000533507 P0C880 135 aa12.26□□□□□ -0.45
NDUFS3-211ENST00000533507 KRTAP3-2Q9BYR7 98 aa12.26□□□□□ -0.45
NDUFS3-211ENST00000533507 MT1FP04733 61 aa12.25□□□□□ -0.45
NDUFS3-211ENST00000533507 R4GN34 69 aa12.04□□□□□ -0.48
NDUFS3-211ENST00000533507 SVIPQ8NHG7 77 aa12.03□□□□□ -0.48
NDUFS3-211ENST00000533507 CRIPTQ9P021 101 aa12.02□□□□□ -0.49
NDUFS3-211ENST00000533507 A0A1B0GU33 70 aa12.01□□□□□ -0.49
NDUFS3-211ENST00000533507 A6NED7 52 aa12.01□□□□□ -0.49
NDUFS3-211ENST00000533507 M0QZ58 72 aa12□□□□□ -0.49
NDUFS3-211ENST00000533507 UQCR11O14957 56 aa11.97□□□□□ -0.49
NDUFS3-211ENST00000533507 KRTAP9-3Q9BYQ3 159 aa11.95□□□□□ -0.5
NDUFS3-211ENST00000533507 SPATA8Q6RVD6 105 aa11.87□□□□□ -0.51
NDUFS3-211ENST00000533507 LINC01554Q52M75 96 aa11.86□□□□□ -0.51
NDUFS3-211ENST00000533507 KRTAP19-1Q8IUB9 90 aa11.86□□□□□ -0.51
NDUFS3-211ENST00000533507 KRTAP13-4Q3LI77 160 aa11.85□□□□□ -0.51
NDUFS3-211ENST00000533507 BRK1Q8WUW1 75 aa11.84□□□□□ -0.51
NDUFS3-211ENST00000533507 SPRR2GQ9BYE4 73 aa11.84□□□□□ -0.51
NDUFS3-211ENST00000533507 MIR22HGQ0VDD5 57 aa11.83□□□□□ -0.52
NDUFS3-211ENST00000533507 CDC42SE1Q9NRR8 79 aa11.8□□□□□ -0.52
NDUFS3-211ENST00000533507 A8MU10 97 aa11.76□□□□□ -0.53
NDUFS3-211ENST00000533507 PRO0628Q9UI54 55 aa11.74□□□□□ -0.53
NDUFS3-211ENST00000533507 A0A0D9SG42 100 aa11.72□□□□□ -0.53
NDUFS3-211ENST00000533507 LCE2BO14633 110 aa11.71□□□□□ -0.54
NDUFS3-211ENST00000533507 LCE2DQ5TA82 110 aaPredicted RBP11.69□□□□□ -0.54
NDUFS3-211ENST00000533507 KRTAP19-8Q3LI54 63 aa11.57□□□□□ -0.56
NDUFS3-211ENST00000533507 KRTAP9-2Q9BYQ4 174 aa11.53□□□□□ -0.56
NDUFS3-211ENST00000533507 USH2AO75445 5202 aa11.5□□□□□ -0.57
NDUFS3-211ENST00000533507 PLAC4Q8WY50 150 aa11.49□□□□□ -0.57
NDUFS3-211ENST00000533507 MT1BP07438 61 aa11.48□□□□□ -0.57
NDUFS3-211ENST00000533507 SPINT4Q6UDR6 99 aa11.48□□□□□ -0.57
NDUFS3-211ENST00000533507 FSIP2Q5CZC0 6907 aa11.46□□□□□ -0.58
NDUFS3-211ENST00000533507 A6NN06 94 aa11.43□□□□□ -0.58
NDUFS3-211ENST00000533507 KRTAP12-1P59990 96 aa11.37□□□□□ -0.59
NDUFS3-211ENST00000533507 KRTAP12-2P59991 146 aa11.36□□□□□ -0.59
NDUFS3-211ENST00000533507 K7ERS5 55 aa11.28□□□□□ -0.6
NDUFS3-211ENST00000533507 CAMK2N1Q7Z7J9 78 aa11.26□□□□□ -0.61
NDUFS3-211ENST00000533507 PMAIP1Q13794 54 aa11.2□□□□□ -0.62
NDUFS3-211ENST00000533507 SSPOA2VEC9 5147 aa11.2□□□□□ -0.62
NDUFS3-211ENST00000533507 KRTAP19-6Q3LI70 58 aa11.06□□□□□ -0.64
NDUFS3-211ENST00000533507 CRCT1Q9UGL9 99 aa11.05□□□□□ -0.64
NDUFS3-211ENST00000533507 PRO2289Q9P1D8 64 aa11.03□□□□□ -0.64
NDUFS3-211ENST00000533507 MT1XP80297 61 aa11.03□□□□□ -0.64
NDUFS3-211ENST00000533507 KRTAP10-5P60370 271 aa11□□□□□ -0.65
NDUFS3-211ENST00000533507 ROMO1P60602 79 aa10.83□□□□□ -0.68
NDUFS3-211ENST00000533507 KTN1-AS1Q86SY8 53 aa10.8□□□□□ -0.68
NDUFS3-211ENST00000533507 FCGBPQ9Y6R7 5405 aaPredicted RBP10.8□□□□□ -0.68
NDUFS3-211ENST00000533507 C10orf95Q9H7T3 257 aa10.8□□□□□ -0.68
NDUFS3-211ENST00000533507 KRTAP9-6A0A140TA67 174 aa10.79□□□□□ -0.68
NDUFS3-211ENST00000533507 KRTAP10-7P60409 375 aaPredicted RBP10.6□□□□□ -0.71
NDUFS3-211ENST00000533507 TNP1P09430 55 aa10.59□□□□□ -0.71
NDUFS3-211ENST00000533507 PRAC1Q96KF2 57 aa10.5□□□□□ -0.73
NDUFS3-211ENST00000533507 KRTAP10-12P60413 245 aa10.44□□□□□ -0.74
NDUFS3-211ENST00000533507 KRTAP25-1Q3LHN0 102 aa10.43□□□□□ -0.74
NDUFS3-211ENST00000533507 MACF1Q9UPN3 7388 aaKnown RBP10.41□□□□□ -0.74
NDUFS3-211ENST00000533507 KMT2DO14686 5537 aa10.4□□□□□ -0.74
NDUFS3-211ENST00000533507 KRTAP4-8A0A0G2JLE6 195 aa10.32□□□□□ -0.76
NDUFS3-211ENST00000533507 KRTAP4-8Q9BYQ9 185 aa10.32□□□□□ -0.76
NDUFS3-211ENST00000533507 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.23□□□□□ -0.77
NDUFS3-211ENST00000533507 SYNE2Q8WXH0 6885 aaKnown RBP10.22□□□□□ -0.77
NDUFS3-211ENST00000533507 LCE3AQ5TA76 89 aa10.2□□□□□ -0.78
NDUFS3-211ENST00000533507 KRTAP8-1Q8IUC2 63 aa10.16□□□□□ -0.78
NDUFS3-211ENST00000533507 KRTAP23-1A1A580 65 aa10.07□□□□□ -0.8
NDUFS3-211ENST00000533507 PP632Q6XCG6 107 aa10.04□□□□□ -0.8
NDUFS3-211ENST00000533507 KRTAP19-5Q3LI72 72 aa9.92□□□□□ -0.82
NDUFS3-211ENST00000533507 SPRR2FQ96RM1 72 aa9.89□□□□□ -0.83
NDUFS3-211ENST00000533507 KRTAP6-3Q3LI67 103 aa9.84□□□□□ -0.83
NDUFS3-211ENST00000533507 KRTAP9-7A8MTY7 169 aa9.83□□□□□ -0.84
NDUFS3-211ENST00000533507 KRTAP19-7Q3SYF9 63 aa9.83□□□□□ -0.84
NDUFS3-211ENST00000533507 KRTAP12-3P60328 96 aa9.8□□□□□ -0.84
NDUFS3-211ENST00000533507 KRTAP5-9P26371 169 aa9.78□□□□□ -0.84
NDUFS3-211ENST00000533507 MT1EP04732 61 aa9.7□□□□□ -0.86
NDUFS3-211ENST00000533507 MUC12Q9UKN1 5478 aa9.7□□□□□ -0.86
NDUFS3-211ENST00000533507 MDN1Q9NU22 5596 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms