RNA–Protein interactions for RNA: ENST00000533476.5

UBXN1-215, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 1,912 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-215ENST00000533476 KRTAP3-1Q9BYR8 98 aa10.22□□□□□ -0.77
UBXN1-215ENST00000533476 MYCBP2O75592 4640 aa10.22□□□□□ -0.77
UBXN1-215ENST00000533476 RBM12B-AS1Q9P1G2 102 aa10.17□□□□□ -0.78
UBXN1-215ENST00000533476 PCLOQ9Y6V0 5065 aa10.15□□□□□ -0.78
UBXN1-215ENST00000533476 RPL37P61927 97 aaKnown RBP10.14□□□□□ -0.79
UBXN1-215ENST00000533476 MT1HL1P0DM35 61 aa10.13□□□□□ -0.79
UBXN1-215ENST00000533476 COX6B2Q6YFQ2 88 aa10.13□□□□□ -0.79
UBXN1-215ENST00000533476 XP32Q5T750 250 aa10.1□□□□□ -0.79
UBXN1-215ENST00000533476 DMBT1Q9UGM3 2413 aaPredicted RBP10.05□□□□□ -0.8
UBXN1-215ENST00000533476 A0A1B0GU33 70 aa9.94□□□□□ -0.82
UBXN1-215ENST00000533476 H0YAA0 97 aa9.93□□□□□ -0.82
UBXN1-215ENST00000533476 H1FX-AS1Q4G0G2 97 aa9.92□□□□□ -0.82
UBXN1-215ENST00000533476 PRAC1Q96KF2 57 aa9.91□□□□□ -0.82
UBXN1-215ENST00000533476 ADM2Q7Z4H4 148 aa9.9□□□□□ -0.83
UBXN1-215ENST00000533476 TPRXLQ17RH7 258 aa9.87□□□□□ -0.83
UBXN1-215ENST00000533476 J3QL48 77 aa9.84□□□□□ -0.83
UBXN1-215ENST00000533476 HERC1Q15751 4861 aa9.82□□□□□ -0.84
UBXN1-215ENST00000533476 KRTAP3-3Q9BYR6 98 aa9.82□□□□□ -0.84
UBXN1-215ENST00000533476 S4R3F8 94 aa9.78□□□□□ -0.84
UBXN1-215ENST00000533476 LINC01554Q52M75 96 aa9.7□□□□□ -0.86
UBXN1-215ENST00000533476 CSAG1Q6PB30 78 aa9.68□□□□□ -0.86
UBXN1-215ENST00000533476 KRTAP10-6P60371 365 aaPredicted RBP9.66□□□□□ -0.86
UBXN1-215ENST00000533476 K7ERS5 55 aa9.65□□□□□ -0.86
UBXN1-215ENST00000533476 KRTAP3-2Q9BYR7 98 aa9.62□□□□□ -0.87
UBXN1-215ENST00000533476 LRP2P98164 4655 aa9.59□□□□□ -0.87
UBXN1-215ENST00000533476 LPAP08519 4548 aa9.52□□□□□ -0.89
UBXN1-215ENST00000533476 KRTAP25-1Q3LHN0 102 aa9.51□□□□□ -0.89
UBXN1-215ENST00000533476 SEC61BP60468 96 aaKnown RBP9.49□□□□□ -0.89
UBXN1-215ENST00000533476 KRTAP13-4Q3LI77 160 aa9.49□□□□□ -0.89
UBXN1-215ENST00000533476 P0C880 135 aa9.48□□□□□ -0.89
UBXN1-215ENST00000533476 HMCN2Q8NDA2 5059 aa9.46□□□□□ -0.9
UBXN1-215ENST00000533476 ROMO1P60602 79 aa9.41□□□□□ -0.9
UBXN1-215ENST00000533476 A0A0D9SG42 100 aa9.36□□□□□ -0.91
UBXN1-215ENST00000533476 KRTAP4-1Q9BYQ7 146 aa9.31□□□□□ -0.92
UBXN1-215ENST00000533476 MUC17Q685J3 4493 aa9.27□□□□□ -0.93
UBXN1-215ENST00000533476 UBR4Q5T4S7 5183 aa9.26□□□□□ -0.93
UBXN1-215ENST00000533476 M0QZ58 72 aa9.25□□□□□ -0.93
UBXN1-215ENST00000533476 CRIPTQ9P021 101 aa9.18□□□□□ -0.94
UBXN1-215ENST00000533476 KRTAP12-2P59991 146 aa9.17□□□□□ -0.94
UBXN1-215ENST00000533476 KRTAP12-1P59990 96 aa9.16□□□□□ -0.94
UBXN1-215ENST00000533476 KRTAP19-2Q3LHN2 52 aa9.16□□□□□ -0.94
UBXN1-215ENST00000533476 MUC2Q02817 5179 aa9.1□□□□□ -0.95
UBXN1-215ENST00000533476 RNF213Q63HN8 5207 aa9.09□□□□□ -0.95
UBXN1-215ENST00000533476 SPINT4Q6UDR6 99 aa9.07□□□□□ -0.96
UBXN1-215ENST00000533476 R4GN34 69 aa9.03□□□□□ -0.96
UBXN1-215ENST00000533476 LORP23490 312 aaPredicted RBP8.94□□□□□ -0.98
UBXN1-215ENST00000533476 C10orf95Q9H7T3 257 aa8.92□□□□□ -0.98
UBXN1-215ENST00000533476 FLGP20930 4061 aaPredicted RBP8.86□□□□□ -0.99
UBXN1-215ENST00000533476 FAT4Q6V0I7 4981 aa8.71□□□□□ -1.02
UBXN1-215ENST00000533476 LCE2CQ5TA81 110 aa8.7□□□□□ -1.02
UBXN1-215ENST00000533476 H3BS24 57 aa8.66□□□□□ -1.02
UBXN1-215ENST00000533476 KRTAP15-1Q3LI76 137 aa8.66□□□□□ -1.02
UBXN1-215ENST00000533476 CAMK2N1Q7Z7J9 78 aa8.54□□□□□ -1.04
UBXN1-215ENST00000533476 MT1HP80294 61 aa8.47□□□□□ -1.05
UBXN1-215ENST00000533476 M0R2T5 61 aa8.43□□□□□ -1.06
UBXN1-215ENST00000533476 PP632Q6XCG6 107 aa8.43□□□□□ -1.06
UBXN1-215ENST00000533476 SPRR2GQ9BYE4 73 aa8.41□□□□□ -1.06
UBXN1-215ENST00000533476 KRTAP19-1Q8IUB9 90 aa8.34□□□□□ -1.07
UBXN1-215ENST00000533476 LCE2AQ5TA79 106 aaPredicted RBP8.33□□□□□ -1.08
UBXN1-215ENST00000533476 NDUFAF8A1L188 74 aa8.32□□□□□ -1.08
UBXN1-215ENST00000533476 PLAC4Q8WY50 150 aa8.3□□□□□ -1.08
UBXN1-215ENST00000533476 MT2AP02795 61 aa8.29□□□□□ -1.08
UBXN1-215ENST00000533476 MT1FP04733 61 aa8.27□□□□□ -1.09
UBXN1-215ENST00000533476 KRTAP9-8Q9BYQ0 159 aa8.25□□□□□ -1.09
UBXN1-215ENST00000533476 KRTAP23-1A1A580 65 aa8.24□□□□□ -1.09
UBXN1-215ENST00000533476 KRTAP10-10P60014 251 aa8.23□□□□□ -1.09
UBXN1-215ENST00000533476 TNP1P09430 55 aa8.21□□□□□ -1.09
UBXN1-215ENST00000533476 KRTAP19-8Q3LI54 63 aa8.09□□□□□ -1.11
UBXN1-215ENST00000533476 MT1BP07438 61 aa7.95□□□□□ -1.14
UBXN1-215ENST00000533476 KRTAP9-3Q9BYQ3 159 aa7.92□□□□□ -1.14
UBXN1-215ENST00000533476 LUZP6Q538Z0 58 aa7.91□□□□□ -1.14
UBXN1-215ENST00000533476 KRTAP10-5P60370 271 aa7.84□□□□□ -1.16
UBXN1-215ENST00000533476 MT1XP80297 61 aa7.84□□□□□ -1.16
UBXN1-215ENST00000533476 SPRR5A0A1B0GTR4 108 aa7.83□□□□□ -1.16
UBXN1-215ENST00000533476 LCE3AQ5TA76 89 aa7.8□□□□□ -1.16
UBXN1-215ENST00000533476 FSIP2Q5CZC0 6907 aa7.77□□□□□ -1.17
UBXN1-215ENST00000533476 KRTAP9-2Q9BYQ4 174 aa7.77□□□□□ -1.17
UBXN1-215ENST00000533476 LCE2DQ5TA82 110 aaPredicted RBP7.66□□□□□ -1.18
UBXN1-215ENST00000533476 KRTAP8-1Q8IUC2 63 aa7.65□□□□□ -1.18
UBXN1-215ENST00000533476 USH2AO75445 5202 aa7.64□□□□□ -1.19
UBXN1-215ENST00000533476 PRO2289Q9P1D8 64 aa7.62□□□□□ -1.19
UBXN1-215ENST00000533476 LCE2BO14633 110 aa7.62□□□□□ -1.19
UBXN1-215ENST00000533476 KRTAP10-12P60413 245 aa7.61□□□□□ -1.19
UBXN1-215ENST00000533476 KRTAP10-7P60409 375 aaPredicted RBP7.56□□□□□ -1.2
UBXN1-215ENST00000533476 A0A0A0MQY5 61 aa7.5□□□□□ -1.21
UBXN1-215ENST00000533476 KRTAP12-3P60328 96 aa7.45□□□□□ -1.22
UBXN1-215ENST00000533476 SSPOA2VEC9 5147 aa7.43□□□□□ -1.22
UBXN1-215ENST00000533476 CRCT1Q9UGL9 99 aa7.38□□□□□ -1.23
UBXN1-215ENST00000533476 KRTAP9-6A0A140TA67 174 aa7.32□□□□□ -1.24
UBXN1-215ENST00000533476 KRTAP19-5Q3LI72 72 aa7.21□□□□□ -1.25
UBXN1-215ENST00000533476 FCGBPQ9Y6R7 5405 aaPredicted RBP7.17□□□□□ -1.26
UBXN1-215ENST00000533476 KRTAP19-6Q3LI70 58 aa7.14□□□□□ -1.27
UBXN1-215ENST00000533476 KRTAP4-8A0A0G2JLE6 195 aa7.11□□□□□ -1.27
UBXN1-215ENST00000533476 KRTAP4-8Q9BYQ9 185 aa7.11□□□□□ -1.27
UBXN1-215ENST00000533476 LCE3CQ5T5A8 94 aa7.01□□□□□ -1.29
UBXN1-215ENST00000533476 KRTAP19-7Q3SYF9 63 aa6.98□□□□□ -1.29
UBXN1-215ENST00000533476 KMT2DO14686 5537 aa6.95□□□□□ -1.3
UBXN1-215ENST00000533476 MACF1Q9UPN3 7388 aaKnown RBP6.93□□□□□ -1.3
UBXN1-215ENST00000533476 INE1O15225 51 aa6.89□□□□□ -1.31
UBXN1-215ENST00000533476 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms