RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 IGKV2D-30A0A075B6S6 120 aa9.88□□□□□ -0.83
SMPD1-208ENST00000533123 RPL37P61927 97 aaKnown RBP9.87□□□□□ -0.83
SMPD1-208ENST00000533123 KTN1-AS1Q86SY8 53 aa9.86□□□□□ -0.83
SMPD1-208ENST00000533123 A6NN06 94 aa9.84□□□□□ -0.83
SMPD1-208ENST00000533123 SPINK7P58062 85 aa9.82□□□□□ -0.84
SMPD1-208ENST00000533123 C7orf65Q6ZTY9 151 aa9.76□□□□□ -0.85
SMPD1-208ENST00000533123 SEC61BP60468 96 aaKnown RBP9.72□□□□□ -0.85
SMPD1-208ENST00000533123 ACYP2P14621 99 aa9.7□□□□□ -0.86
SMPD1-208ENST00000533123 RBM12B-AS1Q9P1G2 102 aa9.7□□□□□ -0.86
SMPD1-208ENST00000533123 UBR4Q5T4S7 5183 aa9.69□□□□□ -0.86
SMPD1-208ENST00000533123 MUC17Q685J3 4493 aa9.68□□□□□ -0.86
SMPD1-208ENST00000533123 DMAC1Q96GE9 116 aa9.67□□□□□ -0.86
SMPD1-208ENST00000533123 MUC2Q02817 5179 aa9.63□□□□□ -0.87
SMPD1-208ENST00000533123 KRTAP4-1Q9BYQ7 146 aa9.59□□□□□ -0.87
SMPD1-208ENST00000533123 A0A1B0GU69 56 aa9.52□□□□□ -0.88
SMPD1-208ENST00000533123 RNF213Q63HN8 5207 aa9.51□□□□□ -0.89
SMPD1-208ENST00000533123 KRTAP3-1Q9BYR8 98 aa9.5□□□□□ -0.89
SMPD1-208ENST00000533123 SPATA8Q6RVD6 105 aa9.47□□□□□ -0.89
SMPD1-208ENST00000533123 COX6B2Q6YFQ2 88 aa9.42□□□□□ -0.9
SMPD1-208ENST00000533123 PRAC1Q96KF2 57 aa9.39□□□□□ -0.91
SMPD1-208ENST00000533123 UQCR11O14957 56 aa9.39□□□□□ -0.91
SMPD1-208ENST00000533123 MIR22HGQ0VDD5 57 aa9.39□□□□□ -0.91
SMPD1-208ENST00000533123 ADM2Q7Z4H4 148 aa9.37□□□□□ -0.91
SMPD1-208ENST00000533123 KRTAP19-2Q3LHN2 52 aa9.25□□□□□ -0.93
SMPD1-208ENST00000533123 FAT4Q6V0I7 4981 aa9.23□□□□□ -0.93
SMPD1-208ENST00000533123 LINC01554Q52M75 96 aa9.17□□□□□ -0.94
SMPD1-208ENST00000533123 LCE2CQ5TA81 110 aa9.16□□□□□ -0.94
SMPD1-208ENST00000533123 H1FX-AS1Q4G0G2 97 aa9.15□□□□□ -0.94
SMPD1-208ENST00000533123 KRTAP3-3Q9BYR6 98 aa9.15□□□□□ -0.95
SMPD1-208ENST00000533123 S4R3F8 94 aa9.14□□□□□ -0.95
SMPD1-208ENST00000533123 FLGP20930 4061 aaPredicted RBP9.11□□□□□ -0.95
SMPD1-208ENST00000533123 CSAG1Q6PB30 78 aa9.09□□□□□ -0.95
SMPD1-208ENST00000533123 H0YAA0 97 aa9.05□□□□□ -0.96
SMPD1-208ENST00000533123 MT1HP80294 61 aa9□□□□□ -0.97
SMPD1-208ENST00000533123 A0A1B0GU33 70 aa8.95□□□□□ -0.98
SMPD1-208ENST00000533123 M0R2T5 61 aa8.91□□□□□ -0.98
SMPD1-208ENST00000533123 KRTAP3-2Q9BYR7 98 aa8.85□□□□□ -0.99
SMPD1-208ENST00000533123 KRTAP10-6P60371 365 aaPredicted RBP8.84□□□□□ -0.99
SMPD1-208ENST00000533123 LCE2AQ5TA79 106 aaPredicted RBP8.84□□□□□ -0.99
SMPD1-208ENST00000533123 KRTAP25-1Q3LHN0 102 aa8.82□□□□□ -1
SMPD1-208ENST00000533123 P0C880 135 aa8.78□□□□□ -1
SMPD1-208ENST00000533123 K7ERS5 55 aa8.69□□□□□ -1.02
SMPD1-208ENST00000533123 LORP23490 312 aaPredicted RBP8.66□□□□□ -1.02
SMPD1-208ENST00000533123 KRTAP13-4Q3LI77 160 aa8.66□□□□□ -1.02
SMPD1-208ENST00000533123 KRTAP9-8Q9BYQ0 159 aa8.63□□□□□ -1.03
SMPD1-208ENST00000533123 CRIPTQ9P021 101 aa8.63□□□□□ -1.03
SMPD1-208ENST00000533123 ROMO1P60602 79 aa8.62□□□□□ -1.03
SMPD1-208ENST00000533123 H3BS24 57 aa8.61□□□□□ -1.03
SMPD1-208ENST00000533123 MT2AP02795 61 aa8.57□□□□□ -1.04
SMPD1-208ENST00000533123 MT1FP04733 61 aa8.52□□□□□ -1.05
SMPD1-208ENST00000533123 A0A0D9SG42 100 aa8.52□□□□□ -1.05
SMPD1-208ENST00000533123 KRTAP10-10P60014 251 aa8.5□□□□□ -1.05
SMPD1-208ENST00000533123 M0QZ58 72 aa8.45□□□□□ -1.06
SMPD1-208ENST00000533123 R4GN34 69 aa8.43□□□□□ -1.06
SMPD1-208ENST00000533123 KRTAP9-3Q9BYQ3 159 aa8.32□□□□□ -1.08
SMPD1-208ENST00000533123 KRTAP12-2P59991 146 aa8.31□□□□□ -1.08
SMPD1-208ENST00000533123 C10orf95Q9H7T3 257 aa8.3□□□□□ -1.08
SMPD1-208ENST00000533123 KRTAP12-1P59990 96 aa8.29□□□□□ -1.08
SMPD1-208ENST00000533123 SPINT4Q6UDR6 99 aa8.27□□□□□ -1.08
SMPD1-208ENST00000533123 KRTAP19-1Q8IUB9 90 aa8.26□□□□□ -1.09
SMPD1-208ENST00000533123 SPRR2GQ9BYE4 73 aa8.23□□□□□ -1.09
SMPD1-208ENST00000533123 LCE2BO14633 110 aa8.15□□□□□ -1.1
SMPD1-208ENST00000533123 KRTAP15-1Q3LI76 137 aa8.12□□□□□ -1.11
SMPD1-208ENST00000533123 LCE2DQ5TA82 110 aaPredicted RBP8.11□□□□□ -1.11
SMPD1-208ENST00000533123 KRTAP19-8Q3LI54 63 aa8.05□□□□□ -1.12
SMPD1-208ENST00000533123 USH2AO75445 5202 aa8.04□□□□□ -1.12
SMPD1-208ENST00000533123 FSIP2Q5CZC0 6907 aa8.04□□□□□ -1.12
SMPD1-208ENST00000533123 MT1BP07438 61 aa7.99□□□□□ -1.13
SMPD1-208ENST00000533123 KRTAP9-2Q9BYQ4 174 aa7.99□□□□□ -1.13
SMPD1-208ENST00000533123 NDUFAF8A1L188 74 aa7.97□□□□□ -1.13
SMPD1-208ENST00000533123 CAMK2N1Q7Z7J9 78 aa7.92□□□□□ -1.14
SMPD1-208ENST00000533123 PLAC4Q8WY50 150 aa7.91□□□□□ -1.14
SMPD1-208ENST00000533123 SSPOA2VEC9 5147 aa7.85□□□□□ -1.15
SMPD1-208ENST00000533123 KRTAP19-6Q3LI70 58 aa7.68□□□□□ -1.18
SMPD1-208ENST00000533123 MT1XP80297 61 aa7.68□□□□□ -1.18
SMPD1-208ENST00000533123 KRTAP10-5P60370 271 aa7.66□□□□□ -1.18
SMPD1-208ENST00000533123 CRCT1Q9UGL9 99 aa7.66□□□□□ -1.18
SMPD1-208ENST00000533123 PRO2289Q9P1D8 64 aa7.6□□□□□ -1.19
SMPD1-208ENST00000533123 FCGBPQ9Y6R7 5405 aaPredicted RBP7.55□□□□□ -1.2
SMPD1-208ENST00000533123 TNP1P09430 55 aa7.52□□□□□ -1.21
SMPD1-208ENST00000533123 PP632Q6XCG6 107 aa7.5□□□□□ -1.21
SMPD1-208ENST00000533123 KRTAP9-6A0A140TA67 174 aa7.46□□□□□ -1.22
SMPD1-208ENST00000533123 KRTAP10-7P60409 375 aaPredicted RBP7.37□□□□□ -1.23
SMPD1-208ENST00000533123 LUZP6Q538Z0 58 aa7.31□□□□□ -1.24
SMPD1-208ENST00000533123 KMT2DO14686 5537 aa7.29□□□□□ -1.24
SMPD1-208ENST00000533123 MACF1Q9UPN3 7388 aaKnown RBP7.28□□□□□ -1.24
SMPD1-208ENST00000533123 KRTAP10-12P60413 245 aa7.27□□□□□ -1.25
SMPD1-208ENST00000533123 LCE3AQ5TA76 89 aa7.25□□□□□ -1.25
SMPD1-208ENST00000533123 KRTAP23-1A1A580 65 aa7.25□□□□□ -1.25
SMPD1-208ENST00000533123 KRTAP4-8A0A0G2JLE6 195 aa7.19□□□□□ -1.26
SMPD1-208ENST00000533123 KRTAP4-8Q9BYQ9 185 aa7.19□□□□□ -1.26
SMPD1-208ENST00000533123 SYNE2Q8WXH0 6885 aaKnown RBP7.14□□□□□ -1.27
SMPD1-208ENST00000533123 SPRR5A0A1B0GTR4 108 aa7.12□□□□□ -1.27
SMPD1-208ENST00000533123 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.09□□□□□ -1.27
SMPD1-208ENST00000533123 A0A0A0MQY5 61 aa7.08□□□□□ -1.28
SMPD1-208ENST00000533123 KRTAP8-1Q8IUC2 63 aa7.04□□□□□ -1.28
SMPD1-208ENST00000533123 KRTAP12-3P60328 96 aa6.93□□□□□ -1.3
SMPD1-208ENST00000533123 KRTAP19-5Q3LI72 72 aa6.88□□□□□ -1.31
SMPD1-208ENST00000533123 KRTAP19-7Q3SYF9 63 aa6.85□□□□□ -1.31
SMPD1-208ENST00000533123 SPRR2FQ96RM1 72 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms