RNA–Protein interactions for RNA: ENST00000533062.5

CHORDC1-208, Transcript of cysteine and histidine rich domain containing 1, human

TSL 4

Gene CHORDC1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHORDC1-208	ENST00000533062		H0Y9P7	68 aa		5.31	□□□□□ -1.56
CHORDC1-208	ENST00000533062	UQCRQ	O14949	82 aa		5.31	□□□□□ -1.56
CHORDC1-208	ENST00000533062	CSAG1	Q6PB30	78 aa		5.29	□□□□□ -1.56
CHORDC1-208	ENST00000533062	FAM236A	A0A1B0GUQ0	79 aa		5.28	□□□□□ -1.56
CHORDC1-208	ENST00000533062	FAM236B	A0A1B0GV22	79 aa		5.28	□□□□□ -1.56
CHORDC1-208	ENST00000533062	ATOX1	O00244	68 aa		5.26	□□□□□ -1.57
CHORDC1-208	ENST00000533062	KRTAP19-6	Q3LI70	58 aa		5.24	□□□□□ -1.57
CHORDC1-208	ENST00000533062	LINC00208	Q96KT6	92 aa		5.23	□□□□□ -1.57
CHORDC1-208	ENST00000533062	OCR1	Q9BZK8	76 aa		5.23	□□□□□ -1.57
CHORDC1-208	ENST00000533062		J3QR89	54 aa		5.22	□□□□□ -1.57
CHORDC1-208	ENST00000533062	KLKP1	Q107X0	134 aa		5.22	□□□□□ -1.57
CHORDC1-208	ENST00000533062	KRTAP9-7	A8MTY7	169 aa		5.2	□□□□□ -1.58
CHORDC1-208	ENST00000533062	LCE1D	Q5T752	114 aa		5.19	□□□□□ -1.58
CHORDC1-208	ENST00000533062	MP68	P56378	58 aa		5.18	□□□□□ -1.58
CHORDC1-208	ENST00000533062	KRTAP4-2	Q9BYR5	136 aa		5.17	□□□□□ -1.58
CHORDC1-208	ENST00000533062	SCGB1A1	P11684	91 aa		5.15	□□□□□ -1.59
CHORDC1-208	ENST00000533062	MACF1	Q9UPN3	7388 aa	Known RBP	5.14	□□□□□ -1.59
CHORDC1-208	ENST00000533062	NDUFC1	O43677	76 aa		5.14	□□□□□ -1.59
CHORDC1-208	ENST00000533062	SPRR2G	Q9BYE4	73 aa		5.14	□□□□□ -1.59
CHORDC1-208	ENST00000533062	MT1B	P07438	61 aa		5.13	□□□□□ -1.59
CHORDC1-208	ENST00000533062	KRTAP4-9	Q9BYQ8	210 aa		5.13	□□□□□ -1.59
CHORDC1-208	ENST00000533062		A8MUN3	132 aa		5.12	□□□□□ -1.59
CHORDC1-208	ENST00000533062	MT-ATP8	P03928	68 aa		5.11	□□□□□ -1.59
CHORDC1-208	ENST00000533062		Q5VV11	94 aa		5.11	□□□□□ -1.59
CHORDC1-208	ENST00000533062	KRTAP19-8	Q3LI54	63 aa		5.1	□□□□□ -1.59
CHORDC1-208	ENST00000533062	IMUP	Q9GZP8	106 aa		5.1	□□□□□ -1.59
CHORDC1-208	ENST00000533062		H3BPC8	53 aa		5.08	□□□□□ -1.6
CHORDC1-208	ENST00000533062		K7ERU9	68 aa		5.06	□□□□□ -1.6
CHORDC1-208	ENST00000533062	ADM2	Q7Z4H4	148 aa		5.06	□□□□□ -1.6
CHORDC1-208	ENST00000533062	SYNE2	Q8WXH0	6885 aa	Known RBP	5.05	□□□□□ -1.6
CHORDC1-208	ENST00000533062		H0YAA0	97 aa		5.05	□□□□□ -1.6
CHORDC1-208	ENST00000533062	CRIPT	Q9P021	101 aa		5.05	□□□□□ -1.6
CHORDC1-208	ENST00000533062		A6NN06	94 aa		5.04	□□□□□ -1.6
CHORDC1-208	ENST00000533062	DMAC1	Q96GE9	116 aa		5.03	□□□□□ -1.6
CHORDC1-208	ENST00000533062	TRAV7	A0A075B6U4	112 aa		4.99	□□□□□ -1.61
CHORDC1-208	ENST00000533062	KRTAP10-5	P60370	271 aa		4.98	□□□□□ -1.61
CHORDC1-208	ENST00000533062		P0C880	135 aa		4.97	□□□□□ -1.61
CHORDC1-208	ENST00000533062	SMIM20	Q8N5G0	67 aa		4.96	□□□□□ -1.62
CHORDC1-208	ENST00000533062	SNURF	Q9Y675	71 aa		4.94	□□□□□ -1.62
CHORDC1-208	ENST00000533062	KRTAP6-3	Q3LI67	103 aa		4.93	□□□□□ -1.62
CHORDC1-208	ENST00000533062	ACYP2	P14621	99 aa		4.92	□□□□□ -1.62
CHORDC1-208	ENST00000533062		R4GN34	69 aa		4.91	□□□□□ -1.62
CHORDC1-208	ENST00000533062		M0QZ58	72 aa		4.89	□□□□□ -1.63
CHORDC1-208	ENST00000533062	KRTAP5-3	Q6L8H2	238 aa		4.89	□□□□□ -1.63
CHORDC1-208	ENST00000533062	C20orf197	Q8N268	126 aa		4.88	□□□□□ -1.63
CHORDC1-208	ENST00000533062	KRTAP4-11	Q9BYQ6	195 aa		4.88	□□□□□ -1.63
CHORDC1-208	ENST00000533062	LCE4A	Q5TA78	99 aa		4.86	□□□□□ -1.63
CHORDC1-208	ENST00000533062	LINC01554	Q52M75	96 aa		4.85	□□□□□ -1.63
CHORDC1-208	ENST00000533062	PLAC4	Q8WY50	150 aa		4.85	□□□□□ -1.63
CHORDC1-208	ENST00000533062	CHKB-CPT1B	H3BT56	60 aa		4.84	□□□□□ -1.63
CHORDC1-208	ENST00000533062	SERP2	Q8N6R1	65 aa		4.84	□□□□□ -1.63
CHORDC1-208	ENST00000533062	MT1X	P80297	61 aa		4.83	□□□□□ -1.64
CHORDC1-208	ENST00000533062	SPTSSB	Q8NFR3	76 aa		4.82	□□□□□ -1.64
CHORDC1-208	ENST00000533062	MUC12	Q9UKN1	5478 aa		4.8	□□□□□ -1.64
CHORDC1-208	ENST00000533062	SPANXA2-OT1	Q8N9U9	137 aa		4.79	□□□□□ -1.64
CHORDC1-208	ENST00000533062	PRO2289	Q9P1D8	64 aa		4.79	□□□□□ -1.64
CHORDC1-208	ENST00000533062	KMT2D	O14686	5537 aa		4.79	□□□□□ -1.64
CHORDC1-208	ENST00000533062	KRTAP5-9	P26371	169 aa		4.73	□□□□□ -1.65
CHORDC1-208	ENST00000533062	NEB	P20929	6669 aa		4.71	□□□□□ -1.66
CHORDC1-208	ENST00000533062	COX7C	P15954	63 aa		4.71	□□□□□ -1.66
CHORDC1-208	ENST00000533062	COA5	Q86WW8	74 aa		4.7	□□□□□ -1.66
CHORDC1-208	ENST00000533062	MDN1	Q9NU22	5596 aa		4.69	□□□□□ -1.66
CHORDC1-208	ENST00000533062	CYSTM1	Q9H1C7	97 aa		4.69	□□□□□ -1.66
CHORDC1-208	ENST00000533062	KRTAP19-4	Q3LI73	84 aa		4.68	□□□□□ -1.66
CHORDC1-208	ENST00000533062	KRTAP13-4	Q3LI77	160 aa		4.67	□□□□□ -1.66
CHORDC1-208	ENST00000533062	LCE5A	Q5TCM9	118 aa		4.67	□□□□□ -1.66
CHORDC1-208	ENST00000533062	KRTAP12-2	P59991	146 aa		4.65	□□□□□ -1.67
CHORDC1-208	ENST00000533062	SPRR2F	Q96RM1	72 aa		4.65	□□□□□ -1.67
CHORDC1-208	ENST00000533062		H7BZZ5	65 aa		4.64	□□□□□ -1.67
CHORDC1-208	ENST00000533062	KRTAP8-1	Q8IUC2	63 aa		4.64	□□□□□ -1.67
CHORDC1-208	ENST00000533062	KRTAP10-7	P60409	375 aa	Predicted RBP	4.63	□□□□□ -1.67
CHORDC1-208	ENST00000533062	ANAPC13	Q9BS18	74 aa		4.58	□□□□□ -1.68
CHORDC1-208	ENST00000533062	SEC61G	P60059	68 aa		4.57	□□□□□ -1.68
CHORDC1-208	ENST00000533062	SPRR2E	P22531	72 aa		4.56	□□□□□ -1.68
CHORDC1-208	ENST00000533062	SPRR2B	P35325	72 aa		4.56	□□□□□ -1.68
CHORDC1-208	ENST00000533062	SPRR2A	P35326	72 aa		4.56	□□□□□ -1.68
CHORDC1-208	ENST00000533062	KRTAP10-12	P60413	245 aa		4.56	□□□□□ -1.68
CHORDC1-208	ENST00000533062	KRTAP20-1	Q3LI63	56 aa		4.56	□□□□□ -1.68
CHORDC1-208	ENST00000533062	SERP1	Q9Y6X1	66 aa		4.56	□□□□□ -1.68
CHORDC1-208	ENST00000533062		A0A0D9SG42	100 aa		4.55	□□□□□ -1.68
CHORDC1-208	ENST00000533062	SPATA8	Q6RVD6	105 aa		4.54	□□□□□ -1.68
CHORDC1-208	ENST00000533062	CCDC179	H3BU77	68 aa		4.53	□□□□□ -1.68
CHORDC1-208	ENST00000533062	CAMK2N1	Q7Z7J9	78 aa		4.53	□□□□□ -1.68
CHORDC1-208	ENST00000533062		A0A1B0GU33	70 aa		4.5	□□□□□ -1.69
CHORDC1-208	ENST00000533062	LCE1A	Q5T7P2	110 aa		4.5	□□□□□ -1.69
CHORDC1-208	ENST00000533062	SPINT4	Q6UDR6	99 aa		4.46	□□□□□ -1.7
CHORDC1-208	ENST00000533062		A0A1B0GU69	56 aa		4.44	□□□□□ -1.7
CHORDC1-208	ENST00000533062	KRTAP2-3	P0C7H8	128 aa		4.44	□□□□□ -1.7
CHORDC1-208	ENST00000533062	KRTAP2-4	Q9BYR9	128 aa		4.44	□□□□□ -1.7
CHORDC1-208	ENST00000533062	KRTAP12-1	P59990	96 aa		4.42	□□□□□ -1.7
CHORDC1-208	ENST00000533062	SPRR2D	P22532	72 aa		4.4	□□□□□ -1.71
CHORDC1-208	ENST00000533062		A8MU10	97 aa		4.39	□□□□□ -1.71
CHORDC1-208	ENST00000533062	SMIM26	A0A096LP01	95 aa		4.36	□□□□□ -1.71
CHORDC1-208	ENST00000533062	ATP5E	P56381	51 aa	Predicted RBP	4.36	□□□□□ -1.71
CHORDC1-208	ENST00000533062	KRTAP19-7	Q3SYF9	63 aa		4.31	□□□□□ -1.72
CHORDC1-208	ENST00000533062	KRTAP2-2	Q9BYT5	123 aa		4.31	□□□□□ -1.72
CHORDC1-208	ENST00000533062	KRTAP2-1	Q9BYU5	128 aa		4.31	□□□□□ -1.72
CHORDC1-208	ENST00000533062		H3BS24	57 aa		4.3	□□□□□ -1.72
CHORDC1-208	ENST00000533062	PRR15L	Q9BU68	103 aa		4.3	□□□□□ -1.72
CHORDC1-208	ENST00000533062	TMEM258	P61165	79 aa		4.29	□□□□□ -1.72

Retrieved 100 of 20,778 RNA–protein pairs in 61 ms