RNA–Protein interactions for RNA: ENST00000532751.1

PTPRK-222, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 4

Gene PTPRK, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-222ENST00000532751 FAM236BA0A1B0GV22 79 aa10.19□□□□□ -0.78
PTPRK-222ENST00000532751 A8MUN3 132 aa10.18□□□□□ -0.78
PTPRK-222ENST00000532751 KRTAP3-3Q9BYR6 98 aa10.16□□□□□ -0.78
PTPRK-222ENST00000532751 SSPOA2VEC9 5147 aa10.15□□□□□ -0.78
PTPRK-222ENST00000532751 NDUFC1O43677 76 aa10.09□□□□□ -0.79
PTPRK-222ENST00000532751 SMIM20Q8N5G0 67 aa10.09□□□□□ -0.79
PTPRK-222ENST00000532751 TRAV7A0A075B6U4 112 aa10.03□□□□□ -0.8
PTPRK-222ENST00000532751 KRTAP19-1Q8IUB9 90 aa10.03□□□□□ -0.8
PTPRK-222ENST00000532751 DMAC1Q96GE9 116 aa9.95□□□□□ -0.82
PTPRK-222ENST00000532751 KRTAP19-6Q3LI70 58 aa9.92□□□□□ -0.82
PTPRK-222ENST00000532751 H0YAA0 97 aa9.91□□□□□ -0.82
PTPRK-222ENST00000532751 SPRR2GQ9BYE4 73 aa9.9□□□□□ -0.82
PTPRK-222ENST00000532751 CRIPTQ9P021 101 aa9.89□□□□□ -0.83
PTPRK-222ENST00000532751 FCGBPQ9Y6R7 5405 aaPredicted RBP9.85□□□□□ -0.83
PTPRK-222ENST00000532751 Q5VV11 94 aa9.82□□□□□ -0.84
PTPRK-222ENST00000532751 ADM2Q7Z4H4 148 aa9.81□□□□□ -0.84
PTPRK-222ENST00000532751 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.8□□□□□ -0.84
PTPRK-222ENST00000532751 ACYP2P14621 99 aa9.8□□□□□ -0.84
PTPRK-222ENST00000532751 KRTAP19-8Q3LI54 63 aa9.79□□□□□ -0.84
PTPRK-222ENST00000532751 SNURFQ9Y675 71 aa9.79□□□□□ -0.84
PTPRK-222ENST00000532751 SERP2Q8N6R1 65 aa9.78□□□□□ -0.84
PTPRK-222ENST00000532751 MT1BP07438 61 aa9.74□□□□□ -0.85
PTPRK-222ENST00000532751 C20orf197Q8N268 126 aa9.72□□□□□ -0.85
PTPRK-222ENST00000532751 SPTSSBQ8NFR3 76 aa9.66□□□□□ -0.86
PTPRK-222ENST00000532751 SPANXA2-OT1Q8N9U9 137 aa9.65□□□□□ -0.86
PTPRK-222ENST00000532751 CHKB-CPT1BH3BT56 60 aa9.63□□□□□ -0.87
PTPRK-222ENST00000532751 KRTAP9-7A8MTY7 169 aa9.62□□□□□ -0.87
PTPRK-222ENST00000532751 A6NN06 94 aa9.6□□□□□ -0.87
PTPRK-222ENST00000532751 P0C880 135 aa9.59□□□□□ -0.87
PTPRK-222ENST00000532751 R4GN34 69 aa9.58□□□□□ -0.88
PTPRK-222ENST00000532751 COX7CP15954 63 aa9.55□□□□□ -0.88
PTPRK-222ENST00000532751 KRTAP3-2Q9BYR7 98 aa9.53□□□□□ -0.88
PTPRK-222ENST00000532751 M0QZ58 72 aa9.5□□□□□ -0.89
PTPRK-222ENST00000532751 MACF1Q9UPN3 7388 aaKnown RBP9.49□□□□□ -0.89
PTPRK-222ENST00000532751 KRTAP10-5P60370 271 aa9.49□□□□□ -0.89
PTPRK-222ENST00000532751 PLAC4Q8WY50 150 aa9.42□□□□□ -0.9
PTPRK-222ENST00000532751 COA5Q86WW8 74 aa9.35□□□□□ -0.91
PTPRK-222ENST00000532751 ANAPC13Q9BS18 74 aa9.35□□□□□ -0.91
PTPRK-222ENST00000532751 LINC01554Q52M75 96 aa9.34□□□□□ -0.91
PTPRK-222ENST00000532751 SYNE2Q8WXH0 6885 aaKnown RBP9.33□□□□□ -0.92
PTPRK-222ENST00000532751 H7BZZ5 65 aa9.32□□□□□ -0.92
PTPRK-222ENST00000532751 PRO2289Q9P1D8 64 aa9.3□□□□□ -0.92
PTPRK-222ENST00000532751 CYSTM1Q9H1C7 97 aa9.29□□□□□ -0.92
PTPRK-222ENST00000532751 KRTAP6-3Q3LI67 103 aa9.27□□□□□ -0.93
PTPRK-222ENST00000532751 MT1XP80297 61 aa9.2□□□□□ -0.94
PTPRK-222ENST00000532751 SEC61GP60059 68 aa9.16□□□□□ -0.94
PTPRK-222ENST00000532751 SERP1Q9Y6X1 66 aa9.13□□□□□ -0.95
PTPRK-222ENST00000532751 CCDC179H3BU77 68 aa9.11□□□□□ -0.95
PTPRK-222ENST00000532751 KRTAP13-4Q3LI77 160 aa9.04□□□□□ -0.96
PTPRK-222ENST00000532751 ATP5EP56381 51 aaPredicted RBP9□□□□□ -0.97
PTPRK-222ENST00000532751 KRTAP12-2P59991 146 aa8.96□□□□□ -0.98
PTPRK-222ENST00000532751 A0A1B0GU33 70 aa8.93□□□□□ -0.98
PTPRK-222ENST00000532751 KRTAP5-9P26371 169 aa8.93□□□□□ -0.98
PTPRK-222ENST00000532751 A0A1B0GU69 56 aa8.9□□□□□ -0.98
PTPRK-222ENST00000532751 SPATA8Q6RVD6 105 aa8.86□□□□□ -0.99
PTPRK-222ENST00000532751 CAMK2N1Q7Z7J9 78 aa8.85□□□□□ -0.99
PTPRK-222ENST00000532751 KMT2DO14686 5537 aa8.85□□□□□ -0.99
PTPRK-222ENST00000532751 MUC12Q9UKN1 5478 aa8.84□□□□□ -0.99
PTPRK-222ENST00000532751 A0A0D9SG42 100 aa8.84□□□□□ -0.99
PTPRK-222ENST00000532751 TMEM258P61165 79 aa8.83□□□□□ -1
PTPRK-222ENST00000532751 KRTAP8-1Q8IUC2 63 aa8.82□□□□□ -1
PTPRK-222ENST00000532751 KRTAP10-7P60409 375 aaPredicted RBP8.79□□□□□ -1
PTPRK-222ENST00000532751 SPRR2FQ96RM1 72 aa8.76□□□□□ -1.01
PTPRK-222ENST00000532751 KRTAP10-12P60413 245 aa8.75□□□□□ -1.01
PTPRK-222ENST00000532751 NEBP20929 6669 aa8.74□□□□□ -1.01
PTPRK-222ENST00000532751 PRR15LQ9BU68 103 aa8.74□□□□□ -1.01
PTPRK-222ENST00000532751 SPINT4Q6UDR6 99 aa8.73□□□□□ -1.01
PTPRK-222ENST00000532751 SMIM26A0A096LP01 95 aa8.71□□□□□ -1.02
PTPRK-222ENST00000532751 KRTAP4-8A0A0G2JLE6 195 aa8.71□□□□□ -1.02
PTPRK-222ENST00000532751 KRTAP4-8Q9BYQ9 185 aa8.71□□□□□ -1.02
PTPRK-222ENST00000532751 LINC01558Q9Y6Z2 57 aa8.66□□□□□ -1.02
PTPRK-222ENST00000532751 KRTAP12-1P59990 96 aa8.64□□□□□ -1.03
PTPRK-222ENST00000532751 MDN1Q9NU22 5596 aa8.6□□□□□ -1.03
PTPRK-222ENST00000532751 A8MU10 97 aa8.57□□□□□ -1.04
PTPRK-222ENST00000532751 SPRR2EP22531 72 aa8.57□□□□□ -1.04
PTPRK-222ENST00000532751 SPRR2BP35325 72 aa8.57□□□□□ -1.04
PTPRK-222ENST00000532751 SPRR2AP35326 72 aa8.57□□□□□ -1.04
PTPRK-222ENST00000532751 KRTAP20-1Q3LI63 56 aa8.48□□□□□ -1.05
PTPRK-222ENST00000532751 LCE1AQ5T7P2 110 aa8.45□□□□□ -1.06
PTPRK-222ENST00000532751 UQCR11O14957 56 aa8.43□□□□□ -1.06
PTPRK-222ENST00000532751 V9GYY9 64 aa8.35□□□□□ -1.07
PTPRK-222ENST00000532751 KRTAP2-3P0C7H8 128 aa8.33□□□□□ -1.08
PTPRK-222ENST00000532751 KRTAP2-4Q9BYR9 128 aa8.33□□□□□ -1.08
PTPRK-222ENST00000532751 SPRR2DP22532 72 aa8.29□□□□□ -1.08
PTPRK-222ENST00000532751 MIR22HGQ0VDD5 57 aa8.25□□□□□ -1.09
PTPRK-222ENST00000532751 Q1T7F1 81 aa8.25□□□□□ -1.09
PTPRK-222ENST00000532751 C10orf95Q9H7T3 257 aa8.24□□□□□ -1.09
PTPRK-222ENST00000532751 TNP1P09430 55 aa8.23□□□□□ -1.09
PTPRK-222ENST00000532751 PSPHP1O15172 72 aa8.21□□□□□ -1.1
PTPRK-222ENST00000532751 KRTAP19-7Q3SYF9 63 aa8.21□□□□□ -1.1
PTPRK-222ENST00000532751 PCP4P48539 62 aa8.16□□□□□ -1.1
PTPRK-222ENST00000532751 MT1EP04732 61 aa8.14□□□□□ -1.11
PTPRK-222ENST00000532751 K7ERS5 55 aa8.11□□□□□ -1.11
PTPRK-222ENST00000532751 KRTAP19-5Q3LI72 72 aa8.09□□□□□ -1.11
PTPRK-222ENST00000532751 KRTAP2-2Q9BYT5 123 aa8.09□□□□□ -1.11
PTPRK-222ENST00000532751 KRTAP2-1Q9BYU5 128 aa8.09□□□□□ -1.11
PTPRK-222ENST00000532751 KRTAP19-3Q7Z4W3 81 aa8.05□□□□□ -1.12
PTPRK-222ENST00000532751 LCE3AQ5TA76 89 aa8.04□□□□□ -1.12
PTPRK-222ENST00000532751 RPS28P62857 69 aaKnown RBP8.03□□□□□ -1.12
PTPRK-222ENST00000532751 LCE3BQ5TA77 95 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms