RNA–Protein interactions for RNA: ENST00000530853.5

NIN-216, Transcript of ninein, humanhuman

TSL 5

Gene NIN, Length 5,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-216ENST00000530853 HECTD4Q9Y4D8 3996 aa3.63□□□□□ -1.83
NIN-216ENST00000530853 LRP1BQ9NZR2 4599 aa3.6□□□□□ -1.83
NIN-216ENST00000530853 TNP1P09430 55 aa3.6□□□□□ -1.83
NIN-216ENST00000530853 ALMS1Q8TCU4 4167 aa3.6□□□□□ -1.83
NIN-216ENST00000530853 KRTAP1-4P0C5Y4 121 aa3.58□□□□□ -1.84
NIN-216ENST00000530853 NDUFAF8A1L188 74 aa3.57□□□□□ -1.84
NIN-216ENST00000530853 DNAH5Q8TE73 4624 aa3.57□□□□□ -1.84
NIN-216ENST00000530853 PP632Q6XCG6 107 aa3.55□□□□□ -1.84
NIN-216ENST00000530853 PKHD1P08F94 4074 aa3.54□□□□□ -1.84
NIN-216ENST00000530853 XP32Q5T750 250 aa3.53□□□□□ -1.84
NIN-216ENST00000530853 SACSQ9NZJ4 4579 aa3.53□□□□□ -1.84
NIN-216ENST00000530853 FAT1Q14517 4588 aa3.53□□□□□ -1.84
NIN-216ENST00000530853 KMT2CQ8NEZ4 4911 aaKnown RBP3.53□□□□□ -1.84
NIN-216ENST00000530853 C10orf95Q9H7T3 257 aa3.52□□□□□ -1.85
NIN-216ENST00000530853 RYR2Q92736 4967 aa3.51□□□□□ -1.85
NIN-216ENST00000530853 VPS13BQ7Z7G8 4022 aa3.5□□□□□ -1.85
NIN-216ENST00000530853 KRTAP10-8P60410 259 aa3.5□□□□□ -1.85
NIN-216ENST00000530853 FAT2Q9NYQ8 4349 aa3.49□□□□□ -1.85
NIN-216ENST00000530853 KRTAP17-1Q9BYP8 105 aa3.49□□□□□ -1.85
NIN-216ENST00000530853 PKD1P98161 4303 aa3.47□□□□□ -1.85
NIN-216ENST00000530853 DYNC1H1Q14204 4646 aaKnown RBP3.47□□□□□ -1.85
NIN-216ENST00000530853 RYR3Q15413 4870 aa3.44□□□□□ -1.86
NIN-216ENST00000530853 KIAA1109Q2LD37 5005 aa3.44□□□□□ -1.86
NIN-216ENST00000530853 KRTAP3-1Q9BYR8 98 aa3.42□□□□□ -1.86
NIN-216ENST00000530853 KRTAP10-4P60372 401 aaPredicted RBP3.42□□□□□ -1.86
NIN-216ENST00000530853 KRTAP4-5Q9BYR2 181 aa3.41□□□□□ -1.86
NIN-216ENST00000530853 P0C880 135 aa3.4□□□□□ -1.86
NIN-216ENST00000530853 BIRC6Q9NR09 4857 aa3.4□□□□□ -1.87
NIN-216ENST00000530853 LRP1Q07954 4544 aaKnown RBP3.39□□□□□ -1.87
NIN-216ENST00000530853 APOBP04114 4563 aaKnown RBP3.38□□□□□ -1.87
NIN-216ENST00000530853 MYCBP2O75592 4640 aa3.38□□□□□ -1.87
NIN-216ENST00000530853 KRTAP12-2P59991 146 aa3.36□□□□□ -1.87
NIN-216ENST00000530853 RYR1P21817 5038 aa3.35□□□□□ -1.87
NIN-216ENST00000530853 EPPK1P58107 5090 aaKnown RBP3.34□□□□□ -1.88
NIN-216ENST00000530853 MT1HL1P0DM35 61 aa3.33□□□□□ -1.88
NIN-216ENST00000530853 KRTAP13-4Q3LI77 160 aa3.33□□□□□ -1.88
NIN-216ENST00000530853 KRTAP3-3Q9BYR6 98 aa3.32□□□□□ -1.88
NIN-216ENST00000530853 KRTAP3-2Q9BYR7 98 aa3.32□□□□□ -1.88
NIN-216ENST00000530853 KRTAP10-6P60371 365 aaPredicted RBP3.31□□□□□ -1.88
NIN-216ENST00000530853 KRTAP12-1P59990 96 aa3.29□□□□□ -1.88
NIN-216ENST00000530853 FAT3Q8TDW7 4589 aa3.29□□□□□ -1.88
NIN-216ENST00000530853 HERC2O95714 4834 aa3.28□□□□□ -1.88
NIN-216ENST00000530853 KRTAP15-1Q3LI76 137 aa3.26□□□□□ -1.89
NIN-216ENST00000530853 LCE2DQ5TA82 110 aaPredicted RBP3.26□□□□□ -1.89
NIN-216ENST00000530853 HSPG2P98160 4391 aa3.26□□□□□ -1.89
NIN-216ENST00000530853 PKHD1L1Q86WI1 4243 aa3.25□□□□□ -1.89
NIN-216ENST00000530853 LORP23490 312 aaPredicted RBP3.25□□□□□ -1.89
NIN-216ENST00000530853 KRTAP9-6A0A140TA67 174 aa3.2□□□□□ -1.9
NIN-216ENST00000530853 LRP2P98164 4655 aa3.19□□□□□ -1.9
NIN-216ENST00000530853 ABCA13Q86UQ4 5058 aa3.17□□□□□ -1.9
NIN-216ENST00000530853 TNXBP22105 4242 aa3.17□□□□□ -1.9
NIN-216ENST00000530853 LPAP08519 4548 aa3.13□□□□□ -1.91
NIN-216ENST00000530853 PCLOQ9Y6V0 5065 aa3.13□□□□□ -1.91
NIN-216ENST00000530853 CRCT1Q9UGL9 99 aa3.12□□□□□ -1.91
NIN-216ENST00000530853 KRTAP8-1Q8IUC2 63 aa3.05□□□□□ -1.92
NIN-216ENST00000530853 KRTAP23-1A1A580 65 aa3.05□□□□□ -1.92
NIN-216ENST00000530853 MUC2Q02817 5179 aa3.04□□□□□ -1.92
NIN-216ENST00000530853 HERC1Q15751 4861 aa3.04□□□□□ -1.92
NIN-216ENST00000530853 INE1O15225 51 aa3.01□□□□□ -1.93
NIN-216ENST00000530853 KRTAP9-2Q9BYQ4 174 aa3.01□□□□□ -1.93
NIN-216ENST00000530853 KRTAP10-7P60409 375 aaPredicted RBP2.96□□□□□ -1.93
NIN-216ENST00000530853 HMCN2Q8NDA2 5059 aa2.96□□□□□ -1.94
NIN-216ENST00000530853 KRTAP4-1Q9BYQ7 146 aa2.95□□□□□ -1.94
NIN-216ENST00000530853 SPRR5A0A1B0GTR4 108 aa2.95□□□□□ -1.94
NIN-216ENST00000530853 KRTAP20-1Q3LI63 56 aa2.94□□□□□ -1.94
NIN-216ENST00000530853 KRTAP10-12P60413 245 aa2.94□□□□□ -1.94
NIN-216ENST00000530853 LCE2BO14633 110 aa2.93□□□□□ -1.94
NIN-216ENST00000530853 LCE2CQ5TA81 110 aa2.93□□□□□ -1.94
NIN-216ENST00000530853 SPRR2EP22531 72 aa2.92□□□□□ -1.94
NIN-216ENST00000530853 SPRR2BP35325 72 aa2.92□□□□□ -1.94
NIN-216ENST00000530853 SPRR2AP35326 72 aa2.92□□□□□ -1.94
NIN-216ENST00000530853 RNF213Q63HN8 5207 aa2.92□□□□□ -1.94
NIN-216ENST00000530853 FAT4Q6V0I7 4981 aa2.91□□□□□ -1.94
NIN-216ENST00000530853 KRTAP9-7A8MTY7 169 aa2.91□□□□□ -1.94
NIN-216ENST00000530853 SPRR2FQ96RM1 72 aa2.9□□□□□ -1.94
NIN-216ENST00000530853 KRTAP19-4Q3LI73 84 aa2.88□□□□□ -1.95
NIN-216ENST00000530853 SPRR2DP22532 72 aa2.88□□□□□ -1.95
NIN-216ENST00000530853 MUC17Q685J3 4493 aa2.87□□□□□ -1.95
NIN-216ENST00000530853 UBR4Q5T4S7 5183 aa2.86□□□□□ -1.95
NIN-216ENST00000530853 LCE2AQ5TA79 106 aaPredicted RBP2.84□□□□□ -1.95
NIN-216ENST00000530853 MT1HP80294 61 aa2.82□□□□□ -1.96
NIN-216ENST00000530853 LCE3AQ5TA76 89 aa2.81□□□□□ -1.96
NIN-216ENST00000530853 KRTAP12-3P60328 96 aa2.8□□□□□ -1.96
NIN-216ENST00000530853 KRTAP19-2Q3LHN2 52 aa2.8□□□□□ -1.96
NIN-216ENST00000530853 FLGP20930 4061 aaPredicted RBP2.75□□□□□ -1.97
NIN-216ENST00000530853 KRTAP12-4P60329 112 aa2.74□□□□□ -1.97
NIN-216ENST00000530853 KRTAP2-3P0C7H8 128 aa2.73□□□□□ -1.97
NIN-216ENST00000530853 KRTAP2-4Q9BYR9 128 aa2.73□□□□□ -1.97
NIN-216ENST00000530853 MT2AP02795 61 aa2.69□□□□□ -1.98
NIN-216ENST00000530853 GPR98Q8WXG9 6306 aa2.69□□□□□ -1.98
NIN-216ENST00000530853 KRTAP9-8Q9BYQ0 159 aa2.66□□□□□ -1.98
NIN-216ENST00000530853 MT1FP04733 61 aa2.65□□□□□ -1.98
NIN-216ENST00000530853 SPRR2GQ9BYE4 73 aa2.64□□□□□ -1.99
NIN-216ENST00000530853 KRTAP6-3Q3LI67 103 aa2.63□□□□□ -1.99
NIN-216ENST00000530853 KRTAP19-1Q8IUB9 90 aa2.6□□□□□ -1.99
NIN-216ENST00000530853 USH2AO75445 5202 aa2.59□□□□□ -2
NIN-216ENST00000530853 KRTAP10-5P60370 271 aa2.58□□□□□ -2
NIN-216ENST00000530853 KRTAP9-3Q9BYQ3 159 aa2.58□□□□□ -2
NIN-216ENST00000530853 KRTAP2-2Q9BYT5 123 aa2.58□□□□□ -2
NIN-216ENST00000530853 KRTAP2-1Q9BYU5 128 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms