RNA–Protein interactions for RNA: ENST00000530426.1

LTBP3-216, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 4

Gene LTBP3, Length 431 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-216ENST00000530426 PCP4P48539 62 aa7.43□□□□□ -1.22
LTBP3-216ENST00000530426 CHKB-CPT1BH3BT56 60 aa7.4□□□□□ -1.22
LTBP3-216ENST00000530426 CSAG1Q6PB30 78 aa7.4□□□□□ -1.22
LTBP3-216ENST00000530426 KRTAP10-6P60371 365 aaPredicted RBP7.37□□□□□ -1.23
LTBP3-216ENST00000530426 KRTAP3-3Q9BYR6 98 aa7.37□□□□□ -1.23
LTBP3-216ENST00000530426 FLGP20930 4061 aaPredicted RBP7.35□□□□□ -1.23
LTBP3-216ENST00000530426 ATP5EP56381 51 aaPredicted RBP7.34□□□□□ -1.23
LTBP3-216ENST00000530426 TMEM258P61165 79 aa7.34□□□□□ -1.23
LTBP3-216ENST00000530426 COA5Q86WW8 74 aa7.33□□□□□ -1.24
LTBP3-216ENST00000530426 LORP23490 312 aaPredicted RBP7.31□□□□□ -1.24
LTBP3-216ENST00000530426 SPTSSBQ8NFR3 76 aa7.31□□□□□ -1.24
LTBP3-216ENST00000530426 KRTAP9-8Q9BYQ0 159 aa7.24□□□□□ -1.25
LTBP3-216ENST00000530426 MT2AP02795 61 aa7.21□□□□□ -1.26
LTBP3-216ENST00000530426 KRTAP10-10P60014 251 aa7.2□□□□□ -1.26
LTBP3-216ENST00000530426 MT1FP04733 61 aa7.16□□□□□ -1.26
LTBP3-216ENST00000530426 ADM2Q7Z4H4 148 aa7.16□□□□□ -1.26
LTBP3-216ENST00000530426 H0YAA0 97 aa7.14□□□□□ -1.27
LTBP3-216ENST00000530426 SERP1Q9Y6X1 66 aa7.12□□□□□ -1.27
LTBP3-216ENST00000530426 SEC61GP60059 68 aa7.05□□□□□ -1.28
LTBP3-216ENST00000530426 P0C880 135 aa7.03□□□□□ -1.28
LTBP3-216ENST00000530426 KRTAP3-2Q9BYR7 98 aa7.03□□□□□ -1.28
LTBP3-216ENST00000530426 KRTAP9-3Q9BYQ3 159 aa6.99□□□□□ -1.29
LTBP3-216ENST00000530426 CRIPTQ9P021 101 aa6.98□□□□□ -1.29
LTBP3-216ENST00000530426 A0A1B0GU69 56 aa6.97□□□□□ -1.29
LTBP3-216ENST00000530426 LCE2DQ5TA82 110 aaPredicted RBP6.97□□□□□ -1.29
LTBP3-216ENST00000530426 R4GN34 69 aa6.93□□□□□ -1.3
LTBP3-216ENST00000530426 RPS28P62857 69 aaKnown RBP6.92□□□□□ -1.3
LTBP3-216ENST00000530426 LINC01558Q9Y6Z2 57 aa6.92□□□□□ -1.3
LTBP3-216ENST00000530426 M0QZ58 72 aa6.91□□□□□ -1.3
LTBP3-216ENST00000530426 PRR15LQ9BU68 103 aa6.91□□□□□ -1.3
LTBP3-216ENST00000530426 SMIM26A0A096LP01 95 aa6.89□□□□□ -1.31
LTBP3-216ENST00000530426 KRTAP9-2Q9BYQ4 174 aa6.89□□□□□ -1.31
LTBP3-216ENST00000530426 KRTAP19-1Q8IUB9 90 aa6.88□□□□□ -1.31
LTBP3-216ENST00000530426 SPRR2GQ9BYE4 73 aa6.88□□□□□ -1.31
LTBP3-216ENST00000530426 LCE2BO14633 110 aa6.86□□□□□ -1.31
LTBP3-216ENST00000530426 V9GYY9 64 aa6.86□□□□□ -1.31
LTBP3-216ENST00000530426 A0A1B0GU33 70 aa6.85□□□□□ -1.31
LTBP3-216ENST00000530426 LINC01554Q52M75 96 aa6.82□□□□□ -1.32
LTBP3-216ENST00000530426 Q1T7F1 81 aa6.81□□□□□ -1.32
LTBP3-216ENST00000530426 PSPHP1O15172 72 aa6.77□□□□□ -1.33
LTBP3-216ENST00000530426 Q5VV11 94 aa6.77□□□□□ -1.33
LTBP3-216ENST00000530426 KRTAP13-4Q3LI77 160 aa6.76□□□□□ -1.33
LTBP3-216ENST00000530426 KRTAP19-8Q3LI54 63 aa6.75□□□□□ -1.33
LTBP3-216ENST00000530426 SPATA8Q6RVD6 105 aa6.75□□□□□ -1.33
LTBP3-216ENST00000530426 KRTAP9-6A0A140TA67 174 aa6.72□□□□□ -1.33
LTBP3-216ENST00000530426 A0A0D9SG42 100 aa6.69□□□□□ -1.34
LTBP3-216ENST00000530426 MT1BP07438 61 aa6.69□□□□□ -1.34
LTBP3-216ENST00000530426 UQCR11O14957 56 aa6.67□□□□□ -1.34
LTBP3-216ENST00000530426 PLAC4Q8WY50 150 aa6.67□□□□□ -1.34
LTBP3-216ENST00000530426 USH2AO75445 5202 aa6.61□□□□□ -1.35
LTBP3-216ENST00000530426 A8MU10 97 aa6.6□□□□□ -1.35
LTBP3-216ENST00000530426 CRCT1Q9UGL9 99 aa6.6□□□□□ -1.35
LTBP3-216ENST00000530426 MIR22HGQ0VDD5 57 aa6.59□□□□□ -1.35
LTBP3-216ENST00000530426 A6NN06 94 aa6.58□□□□□ -1.36
LTBP3-216ENST00000530426 FSIP2Q5CZC0 6907 aa6.57□□□□□ -1.36
LTBP3-216ENST00000530426 A6NED7 52 aa6.57□□□□□ -1.36
LTBP3-216ENST00000530426 SPINT4Q6UDR6 99 aa6.57□□□□□ -1.36
LTBP3-216ENST00000530426 KRTAP19-6Q3LI70 58 aa6.52□□□□□ -1.37
LTBP3-216ENST00000530426 KRTAP12-1P59990 96 aa6.5□□□□□ -1.37
LTBP3-216ENST00000530426 CAMK2N1Q7Z7J9 78 aa6.48□□□□□ -1.37
LTBP3-216ENST00000530426 KRTAP12-2P59991 146 aa6.47□□□□□ -1.37
LTBP3-216ENST00000530426 KRTAP10-5P60370 271 aa6.44□□□□□ -1.38
LTBP3-216ENST00000530426 PRO2289Q9P1D8 64 aa6.44□□□□□ -1.38
LTBP3-216ENST00000530426 SSPOA2VEC9 5147 aa6.42□□□□□ -1.38
LTBP3-216ENST00000530426 MT1XP80297 61 aa6.4□□□□□ -1.38
LTBP3-216ENST00000530426 K7ERS5 55 aa6.39□□□□□ -1.39
LTBP3-216ENST00000530426 CDC42SE1Q9NRR8 79 aa6.36□□□□□ -1.39
LTBP3-216ENST00000530426 BRK1Q8WUW1 75 aa6.25□□□□□ -1.41
LTBP3-216ENST00000530426 FCGBPQ9Y6R7 5405 aaPredicted RBP6.23□□□□□ -1.41
LTBP3-216ENST00000530426 C10orf95Q9H7T3 257 aa6.17□□□□□ -1.42
LTBP3-216ENST00000530426 KRTAP10-7P60409 375 aaPredicted RBP6.14□□□□□ -1.43
LTBP3-216ENST00000530426 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.11□□□□□ -1.43
LTBP3-216ENST00000530426 TNP1P09430 55 aa6.09□□□□□ -1.43
LTBP3-216ENST00000530426 KRTAP10-12P60413 245 aa6.07□□□□□ -1.44
LTBP3-216ENST00000530426 MACF1Q9UPN3 7388 aaKnown RBP6.03□□□□□ -1.44
LTBP3-216ENST00000530426 ROMO1P60602 79 aa6.02□□□□□ -1.45
LTBP3-216ENST00000530426 KRTAP9-7A8MTY7 169 aa6.01□□□□□ -1.45
LTBP3-216ENST00000530426 KRTAP4-8A0A0G2JLE6 195 aa5.99□□□□□ -1.45
LTBP3-216ENST00000530426 KRTAP4-8Q9BYQ9 185 aa5.99□□□□□ -1.45
LTBP3-216ENST00000530426 KRTAP25-1Q3LHN0 102 aa5.97□□□□□ -1.45
LTBP3-216ENST00000530426 KRTAP8-1Q8IUC2 63 aa5.96□□□□□ -1.46
LTBP3-216ENST00000530426 SYNE2Q8WXH0 6885 aaKnown RBP5.9□□□□□ -1.46
LTBP3-216ENST00000530426 PMAIP1Q13794 54 aa5.89□□□□□ -1.47
LTBP3-216ENST00000530426 PRO0628Q9UI54 55 aa5.88□□□□□ -1.47
LTBP3-216ENST00000530426 KRTAP6-3Q3LI67 103 aa5.87□□□□□ -1.47
LTBP3-216ENST00000530426 LCE3AQ5TA76 89 aa5.86□□□□□ -1.47
LTBP3-216ENST00000530426 KMT2DO14686 5537 aa5.82□□□□□ -1.48
LTBP3-216ENST00000530426 SPRR2FQ96RM1 72 aa5.81□□□□□ -1.48
LTBP3-216ENST00000530426 KRTAP5-9P26371 169 aa5.77□□□□□ -1.49
LTBP3-216ENST00000530426 KRTAP19-5Q3LI72 72 aa5.74□□□□□ -1.49
LTBP3-216ENST00000530426 KRTAP23-1A1A580 65 aa5.73□□□□□ -1.49
LTBP3-216ENST00000530426 KRTAP19-7Q3SYF9 63 aa5.7□□□□□ -1.5
LTBP3-216ENST00000530426 PP632Q6XCG6 107 aa5.68□□□□□ -1.5
LTBP3-216ENST00000530426 MT1EP04732 61 aa5.64□□□□□ -1.51
LTBP3-216ENST00000530426 KRTAP12-3P60328 96 aa5.64□□□□□ -1.51
LTBP3-216ENST00000530426 SPRR2EP22531 72 aa5.62□□□□□ -1.51
LTBP3-216ENST00000530426 SPRR2BP35325 72 aa5.62□□□□□ -1.51
LTBP3-216ENST00000530426 SPRR2AP35326 72 aa5.62□□□□□ -1.51
LTBP3-216ENST00000530426 LCE1AQ5T7P2 110 aa5.55□□□□□ -1.52
LTBP3-216ENST00000530426 PRAC1Q96KF2 57 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms