RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 FLGP20930 4061 aaPredicted RBP4.64□□□□□ -1.67
TGFBR3-208ENST00000529608 H0Y9P7 68 aa4.64□□□□□ -1.67
TGFBR3-208ENST00000529608 MRPL34Q9BQ48 92 aaKnown RBP4.64□□□□□ -1.67
TGFBR3-208ENST00000529608 TRAV22A0A0B4J277 110 aa4.63□□□□□ -1.67
TGFBR3-208ENST00000529608 RPS29P62273 56 aaKnown RBP4.63□□□□□ -1.67
TGFBR3-208ENST00000529608 PCOTHQ58A44 107 aa4.63□□□□□ -1.67
TGFBR3-208ENST00000529608 LINC00208Q96KT6 92 aa4.63□□□□□ -1.67
TGFBR3-208ENST00000529608 KRTAP9-8Q9BYQ0 159 aa4.63□□□□□ -1.67
TGFBR3-208ENST00000529608 C1orf195Q5TG92 126 aa4.61□□□□□ -1.67
TGFBR3-208ENST00000529608 NDUFS5O43920 106 aa4.6□□□□□ -1.67
TGFBR3-208ENST00000529608 C1orf64Q8NEQ6 169 aa4.6□□□□□ -1.67
TGFBR3-208ENST00000529608 C9orf92A6NGG3 77 aa4.59□□□□□ -1.67
TGFBR3-208ENST00000529608 LINC00313P59037 77 aa4.59□□□□□ -1.67
TGFBR3-208ENST00000529608 SPANXA2-OT1Q8N9U9 137 aa4.59□□□□□ -1.67
TGFBR3-208ENST00000529608 CYP4F30PQ9H0H9 118 aa4.59□□□□□ -1.67
TGFBR3-208ENST00000529608 SMIM26A0A096LP01 95 aa4.58□□□□□ -1.68
TGFBR3-208ENST00000529608 NOTCH2NLQ7Z3S9 236 aa4.57□□□□□ -1.68
TGFBR3-208ENST00000529608 SSPOA2VEC9 5147 aa4.56□□□□□ -1.68
TGFBR3-208ENST00000529608 LOC101927531A0A1B0GV80 90 aa4.55□□□□□ -1.68
TGFBR3-208ENST00000529608 Q8N9P0 234 aaPredicted RBP4.55□□□□□ -1.68
TGFBR3-208ENST00000529608 USH2AO75445 5202 aa4.55□□□□□ -1.68
TGFBR3-208ENST00000529608 M0R2T5 61 aa4.53□□□□□ -1.68
TGFBR3-208ENST00000529608 KRTAP16-1A8MUX0 517 aa4.51□□□□□ -1.69
TGFBR3-208ENST00000529608 Q5W150 140 aa4.49□□□□□ -1.69
TGFBR3-208ENST00000529608 RPL37P61927 97 aaKnown RBP4.48□□□□□ -1.69
TGFBR3-208ENST00000529608 COX6B2Q6YFQ2 88 aa4.47□□□□□ -1.69
TGFBR3-208ENST00000529608 LCE1AQ5T7P2 110 aa4.46□□□□□ -1.7
TGFBR3-208ENST00000529608 IGKV2-30P06310 120 aa4.45□□□□□ -1.7
TGFBR3-208ENST00000529608 C4orf26Q17RF5 130 aa4.45□□□□□ -1.7
TGFBR3-208ENST00000529608 V9GYY9 64 aa4.45□□□□□ -1.7
TGFBR3-208ENST00000529608 Q1T7F1 81 aa4.44□□□□□ -1.7
TGFBR3-208ENST00000529608 FCGBPQ9Y6R7 5405 aaPredicted RBP4.43□□□□□ -1.7
TGFBR3-208ENST00000529608 COA5Q86WW8 74 aa4.42□□□□□ -1.7
TGFBR3-208ENST00000529608 MPLKIPQ8TAP9 179 aa4.42□□□□□ -1.7
TGFBR3-208ENST00000529608 ACYP2P14621 99 aa4.41□□□□□ -1.7
TGFBR3-208ENST00000529608 A8MUU9 505 aa4.4□□□□□ -1.71
TGFBR3-208ENST00000529608 HRES1P13985 223 aa4.4□□□□□ -1.71
TGFBR3-208ENST00000529608 C20orf166-AS1Q96NR2 134 aa4.39□□□□□ -1.71
TGFBR3-208ENST00000529608 IGKV2D-30A0A075B6S6 120 aa4.37□□□□□ -1.71
TGFBR3-208ENST00000529608 C7orf65Q6ZTY9 151 aa4.37□□□□□ -1.71
TGFBR3-208ENST00000529608 DMAC1Q96GE9 116 aa4.37□□□□□ -1.71
TGFBR3-208ENST00000529608 MT2AP02795 61 aa4.35□□□□□ -1.71
TGFBR3-208ENST00000529608 A8MUN3 132 aa4.33□□□□□ -1.72
TGFBR3-208ENST00000529608 CHKB-CPT1BH3BT56 60 aa4.33□□□□□ -1.72
TGFBR3-208ENST00000529608 Q75L30 129 aa4.33□□□□□ -1.72
TGFBR3-208ENST00000529608 LINC01558Q9Y6Z2 57 aa4.33□□□□□ -1.72
TGFBR3-208ENST00000529608 SYNE2Q8WXH0 6885 aaKnown RBP4.32□□□□□ -1.72
TGFBR3-208ENST00000529608 MACF1Q9UPN3 7388 aaKnown RBP4.32□□□□□ -1.72
TGFBR3-208ENST00000529608 MT1FP04733 61 aa4.32□□□□□ -1.72
TGFBR3-208ENST00000529608 SVIPQ8NHG7 77 aa4.32□□□□□ -1.72
TGFBR3-208ENST00000529608 PSPHP1O15172 72 aa4.3□□□□□ -1.72
TGFBR3-208ENST00000529608 ATP11AUNQ6ZP68 121 aa4.3□□□□□ -1.72
TGFBR3-208ENST00000529608 PRR15LQ9BU68 103 aa4.29□□□□□ -1.72
TGFBR3-208ENST00000529608 PRO0628Q9UI54 55 aa4.29□□□□□ -1.72
TGFBR3-208ENST00000529608 Q5VV11 94 aa4.28□□□□□ -1.72
TGFBR3-208ENST00000529608 SPINK7P58062 85 aa4.27□□□□□ -1.73
TGFBR3-208ENST00000529608 BRK1Q8WUW1 75 aa4.26□□□□□ -1.73
TGFBR3-208ENST00000529608 SPTSSBQ8NFR3 76 aa4.25□□□□□ -1.73
TGFBR3-208ENST00000529608 KRTAP10-10P60014 251 aa4.22□□□□□ -1.73
TGFBR3-208ENST00000529608 KRTAP19-6Q3LI70 58 aa4.21□□□□□ -1.74
TGFBR3-208ENST00000529608 A0A1B0GU69 56 aa4.2□□□□□ -1.74
TGFBR3-208ENST00000529608 A6NED7 52 aa4.2□□□□□ -1.74
TGFBR3-208ENST00000529608 CDC42SE1Q9NRR8 79 aa4.17□□□□□ -1.74
TGFBR3-208ENST00000529608 SEC61GP60059 68 aa4.16□□□□□ -1.74
TGFBR3-208ENST00000529608 KRTAP2-2Q9BYT5 123 aa4.16□□□□□ -1.74
TGFBR3-208ENST00000529608 KRTAP6-3Q3LI67 103 aa4.15□□□□□ -1.75
TGFBR3-208ENST00000529608 LCA10Q71F78 164 aa4.14□□□□□ -1.75
TGFBR3-208ENST00000529608 UQCR11O14957 56 aa4.12□□□□□ -1.75
TGFBR3-208ENST00000529608 RBM12B-AS1Q9P1G2 102 aa4.1□□□□□ -1.75
TGFBR3-208ENST00000529608 SPATA8Q6RVD6 105 aa4.09□□□□□ -1.75
TGFBR3-208ENST00000529608 A8MU10 97 aa4.07□□□□□ -1.76
TGFBR3-208ENST00000529608 MIR22HGQ0VDD5 57 aa4.07□□□□□ -1.76
TGFBR3-208ENST00000529608 NEBP20929 6669 aa4.07□□□□□ -1.76
TGFBR3-208ENST00000529608 PMAIP1Q13794 54 aa4.06□□□□□ -1.76
TGFBR3-208ENST00000529608 H1FX-AS1Q4G0G2 97 aa4.06□□□□□ -1.76
TGFBR3-208ENST00000529608 S4R3F8 94 aa4.05□□□□□ -1.76
TGFBR3-208ENST00000529608 MUC12Q9UKN1 5478 aa4.05□□□□□ -1.76
TGFBR3-208ENST00000529608 A0A1B0GU33 70 aa4.02□□□□□ -1.77
TGFBR3-208ENST00000529608 A0A0A0MQY5 61 aa4.01□□□□□ -1.77
TGFBR3-208ENST00000529608 A6NN06 94 aa3.99□□□□□ -1.77
TGFBR3-208ENST00000529608 CSAG1Q6PB30 78 aa3.97□□□□□ -1.77
TGFBR3-208ENST00000529608 KRTAP20-1Q3LI63 56 aa3.96□□□□□ -1.78
TGFBR3-208ENST00000529608 H0YAA0 97 aa3.94□□□□□ -1.78
TGFBR3-208ENST00000529608 KTN1-AS1Q86SY8 53 aa3.94□□□□□ -1.78
TGFBR3-208ENST00000529608 KRTAP10-7P60409 375 aaPredicted RBP3.93□□□□□ -1.78
TGFBR3-208ENST00000529608 MT1BP07438 61 aa3.91□□□□□ -1.78
TGFBR3-208ENST00000529608 K7ERS5 55 aa3.9□□□□□ -1.79
TGFBR3-208ENST00000529608 MT3P25713 68 aa3.9□□□□□ -1.79
TGFBR3-208ENST00000529608 KRTAP5-9P26371 169 aa3.88□□□□□ -1.79
TGFBR3-208ENST00000529608 ADM2Q7Z4H4 148 aa3.88□□□□□ -1.79
TGFBR3-208ENST00000529608 P0C880 135 aa3.86□□□□□ -1.79
TGFBR3-208ENST00000529608 KMT2DO14686 5537 aa3.86□□□□□ -1.79
TGFBR3-208ENST00000529608 MDN1Q9NU22 5596 aa3.85□□□□□ -1.79
TGFBR3-208ENST00000529608 M0QZ58 72 aa3.85□□□□□ -1.79
TGFBR3-208ENST00000529608 KRTAP5-11Q6L8G4 156 aa3.85□□□□□ -1.79
TGFBR3-208ENST00000529608 KRTAP10-5P60370 271 aa3.83□□□□□ -1.8
TGFBR3-208ENST00000529608 KRTAP19-8Q3LI54 63 aa3.82□□□□□ -1.8
TGFBR3-208ENST00000529608 KRTAP13-4Q3LI77 160 aa3.82□□□□□ -1.8
TGFBR3-208ENST00000529608 LCE1EQ5T753 118 aa3.79□□□□□ -1.8
TGFBR3-208ENST00000529608 SPRR2GQ9BYE4 73 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms