RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	IGKV2D-30	A0A075B6S6	120 aa		7.99	□□□□□ -1.13
NR1H3-231	ENST00000529540	UQCR11	O14957	56 aa		7.98	□□□□□ -1.13
NR1H3-231	ENST00000529540	TPRXL	Q17RH7	258 aa		7.98	□□□□□ -1.13
NR1H3-231	ENST00000529540	MIR22HG	Q0VDD5	57 aa		7.97	□□□□□ -1.13
NR1H3-231	ENST00000529540	C9orf92	A6NGG3	77 aa		7.89	□□□□□ -1.15
NR1H3-231	ENST00000529540	PRAC1	Q96KF2	57 aa		7.89	□□□□□ -1.15
NR1H3-231	ENST00000529540	ADM2	Q7Z4H4	148 aa		7.85	□□□□□ -1.15
NR1H3-231	ENST00000529540	HERC1	Q15751	4861 aa		7.83	□□□□□ -1.16
NR1H3-231	ENST00000529540	XP32	Q5T750	250 aa		7.83	□□□□□ -1.16
NR1H3-231	ENST00000529540	C20orf166-AS1	Q96NR2	134 aa		7.81	□□□□□ -1.16
NR1H3-231	ENST00000529540		A8MUU9	505 aa		7.79	□□□□□ -1.16
NR1H3-231	ENST00000529540	LINC01554	Q52M75	96 aa		7.77	□□□□□ -1.17
NR1H3-231	ENST00000529540	RPL37	P61927	97 aa	Known RBP	7.76	□□□□□ -1.17
NR1H3-231	ENST00000529540	SEC61B	P60468	96 aa	Known RBP	7.73	□□□□□ -1.17
NR1H3-231	ENST00000529540	HMCN2	Q8NDA2	5059 aa		7.73	□□□□□ -1.17
NR1H3-231	ENST00000529540	LPA	P08519	4548 aa		7.67	□□□□□ -1.18
NR1H3-231	ENST00000529540	CSAG1	Q6PB30	78 aa		7.67	□□□□□ -1.18
NR1H3-231	ENST00000529540		H0YAA0	97 aa		7.65	□□□□□ -1.18
NR1H3-231	ENST00000529540	KRTAP3-1	Q9BYR8	98 aa		7.62	□□□□□ -1.19
NR1H3-231	ENST00000529540	LRP2	P98164	4655 aa		7.61	□□□□□ -1.19
NR1H3-231	ENST00000529540		A0A1B0GU33	70 aa		7.6	□□□□□ -1.19
NR1H3-231	ENST00000529540	H1FX-AS1	Q4G0G2	97 aa		7.6	□□□□□ -1.19
NR1H3-231	ENST00000529540	KRTAP25-1	Q3LHN0	102 aa		7.51	□□□□□ -1.21
NR1H3-231	ENST00000529540	COX6B2	Q6YFQ2	88 aa		7.51	□□□□□ -1.21
NR1H3-231	ENST00000529540	MUC17	Q685J3	4493 aa		7.48	□□□□□ -1.21
NR1H3-231	ENST00000529540		K7ERS5	55 aa		7.43	□□□□□ -1.22
NR1H3-231	ENST00000529540	KRTAP4-1	Q9BYQ7	146 aa		7.39	□□□□□ -1.23
NR1H3-231	ENST00000529540	UBR4	Q5T4S7	5183 aa		7.38	□□□□□ -1.23
NR1H3-231	ENST00000529540	KRTAP10-6	P60371	365 aa	Predicted RBP	7.31	□□□□□ -1.24
NR1H3-231	ENST00000529540	ROMO1	P60602	79 aa		7.3	□□□□□ -1.24
NR1H3-231	ENST00000529540	KRTAP3-3	Q9BYR6	98 aa		7.3	□□□□□ -1.24
NR1H3-231	ENST00000529540	MUC2	Q02817	5179 aa		7.26	□□□□□ -1.25
NR1H3-231	ENST00000529540	KRTAP3-2	Q9BYR7	98 aa		7.25	□□□□□ -1.25
NR1H3-231	ENST00000529540		H3BS24	57 aa		7.25	□□□□□ -1.25
NR1H3-231	ENST00000529540	RNF213	Q63HN8	5207 aa		7.23	□□□□□ -1.25
NR1H3-231	ENST00000529540	KRTAP13-4	Q3LI77	160 aa		7.22	□□□□□ -1.25
NR1H3-231	ENST00000529540		S4R3F8	94 aa		7.21	□□□□□ -1.26
NR1H3-231	ENST00000529540	KRTAP19-2	Q3LHN2	52 aa		7.18	□□□□□ -1.26
NR1H3-231	ENST00000529540	CRIPT	Q9P021	101 aa		7.17	□□□□□ -1.26
NR1H3-231	ENST00000529540	LCE2C	Q5TA81	110 aa		7.12	□□□□□ -1.27
NR1H3-231	ENST00000529540		A0A0D9SG42	100 aa		7.12	□□□□□ -1.27
NR1H3-231	ENST00000529540		P0C880	135 aa		7.08	□□□□□ -1.28
NR1H3-231	ENST00000529540	MT1H	P80294	61 aa		7.03	□□□□□ -1.28
NR1H3-231	ENST00000529540	FAT4	Q6V0I7	4981 aa		7.02	□□□□□ -1.29
NR1H3-231	ENST00000529540		M0R2T5	61 aa		7.01	□□□□□ -1.29
NR1H3-231	ENST00000529540	KRTAP12-2	P59991	146 aa		7	□□□□□ -1.29
NR1H3-231	ENST00000529540	KRTAP12-1	P59990	96 aa		6.98	□□□□□ -1.29
NR1H3-231	ENST00000529540	FLG	P20930	4061 aa	Predicted RBP	6.97	□□□□□ -1.29
NR1H3-231	ENST00000529540	LCE2A	Q5TA79	106 aa	Predicted RBP	6.96	□□□□□ -1.3
NR1H3-231	ENST00000529540	SPINT4	Q6UDR6	99 aa		6.96	□□□□□ -1.3
NR1H3-231	ENST00000529540		M0QZ58	72 aa		6.95	□□□□□ -1.3
NR1H3-231	ENST00000529540	C10orf95	Q9H7T3	257 aa		6.95	□□□□□ -1.3
NR1H3-231	ENST00000529540	KRTAP15-1	Q3LI76	137 aa		6.9	□□□□□ -1.31
NR1H3-231	ENST00000529540	LOR	P23490	312 aa	Predicted RBP	6.8	□□□□□ -1.32
NR1H3-231	ENST00000529540	KRTAP9-8	Q9BYQ0	159 aa		6.72	□□□□□ -1.33
NR1H3-231	ENST00000529540	NDUFAF8	A1L188	74 aa		6.69	□□□□□ -1.34
NR1H3-231	ENST00000529540	MT2A	P02795	61 aa		6.68	□□□□□ -1.34
NR1H3-231	ENST00000529540	KRTAP10-10	P60014	251 aa		6.66	□□□□□ -1.34
NR1H3-231	ENST00000529540		R4GN34	69 aa		6.65	□□□□□ -1.35
NR1H3-231	ENST00000529540	MT1F	P04733	61 aa		6.62	□□□□□ -1.35
NR1H3-231	ENST00000529540	KRTAP9-3	Q9BYQ3	159 aa		6.5	□□□□□ -1.37
NR1H3-231	ENST00000529540	SPRR2G	Q9BYE4	73 aa		6.48	□□□□□ -1.37
NR1H3-231	ENST00000529540	PLAC4	Q8WY50	150 aa		6.47	□□□□□ -1.37
NR1H3-231	ENST00000529540	LCE2D	Q5TA82	110 aa	Predicted RBP	6.46	□□□□□ -1.37
NR1H3-231	ENST00000529540	PP632	Q6XCG6	107 aa		6.45	□□□□□ -1.38
NR1H3-231	ENST00000529540	KRTAP19-1	Q8IUB9	90 aa		6.42	□□□□□ -1.38
NR1H3-231	ENST00000529540	KRTAP19-8	Q3LI54	63 aa		6.34	□□□□□ -1.39
NR1H3-231	ENST00000529540	LCE2B	O14633	110 aa		6.33	□□□□□ -1.4
NR1H3-231	ENST00000529540	CAMK2N1	Q7Z7J9	78 aa		6.33	□□□□□ -1.4
NR1H3-231	ENST00000529540	KRTAP9-2	Q9BYQ4	174 aa		6.3	□□□□□ -1.4
NR1H3-231	ENST00000529540	KRTAP23-1	A1A580	65 aa		6.26	□□□□□ -1.41
NR1H3-231	ENST00000529540	MT1B	P07438	61 aa		6.22	□□□□□ -1.41
NR1H3-231	ENST00000529540	LUZP6	Q538Z0	58 aa		6.2	□□□□□ -1.42
NR1H3-231	ENST00000529540	KRTAP9-6	A0A140TA67	174 aa		6.17	□□□□□ -1.42
NR1H3-231	ENST00000529540	TNP1	P09430	55 aa		6.17	□□□□□ -1.42
NR1H3-231	ENST00000529540	USH2A	O75445	5202 aa		6.11	□□□□□ -1.43
NR1H3-231	ENST00000529540	SPRR5	A0A1B0GTR4	108 aa		6.1	□□□□□ -1.43
NR1H3-231	ENST00000529540	PRO2289	Q9P1D8	64 aa		6.09	□□□□□ -1.43
NR1H3-231	ENST00000529540	KRTAP19-6	Q3LI70	58 aa		6.08	□□□□□ -1.44
NR1H3-231	ENST00000529540	CRCT1	Q9UGL9	99 aa		6.06	□□□□□ -1.44
NR1H3-231	ENST00000529540		A0A0A0MQY5	61 aa		6.04	□□□□□ -1.44
NR1H3-231	ENST00000529540	FSIP2	Q5CZC0	6907 aa		6.03	□□□□□ -1.44
NR1H3-231	ENST00000529540	KRTAP10-5	P60370	271 aa		6.01	□□□□□ -1.45
NR1H3-231	ENST00000529540	MT1X	P80297	61 aa		5.97	□□□□□ -1.45
NR1H3-231	ENST00000529540	SSPO	A2VEC9	5147 aa		5.95	□□□□□ -1.46
NR1H3-231	ENST00000529540	LCE3A	Q5TA76	89 aa		5.79	□□□□□ -1.48
NR1H3-231	ENST00000529540	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	5.77	□□□□□ -1.49
NR1H3-231	ENST00000529540	KRTAP8-1	Q8IUC2	63 aa		5.72	□□□□□ -1.49
NR1H3-231	ENST00000529540	KRTAP10-12	P60413	245 aa		5.7	□□□□□ -1.5
NR1H3-231	ENST00000529540	KRTAP10-7	P60409	375 aa	Predicted RBP	5.69	□□□□□ -1.5
NR1H3-231	ENST00000529540	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	5.6	□□□□□ -1.51
NR1H3-231	ENST00000529540	MACF1	Q9UPN3	7388 aa	Known RBP	5.55	□□□□□ -1.52
NR1H3-231	ENST00000529540	KRTAP12-3	P60328	96 aa		5.53	□□□□□ -1.52
NR1H3-231	ENST00000529540	INE1	O15225	51 aa		5.52	□□□□□ -1.53
NR1H3-231	ENST00000529540	KRTAP4-8	A0A0G2JLE6	195 aa		5.5	□□□□□ -1.53
NR1H3-231	ENST00000529540	KRTAP9-7	A8MTY7	169 aa		5.5	□□□□□ -1.53
NR1H3-231	ENST00000529540	KRTAP4-8	Q9BYQ9	185 aa		5.5	□□□□□ -1.53
NR1H3-231	ENST00000529540	KRTAP6-3	Q3LI67	103 aa		5.44	□□□□□ -1.54
NR1H3-231	ENST00000529540	KRTAP5-9	P26371	169 aa		5.41	□□□□□ -1.54
NR1H3-231	ENST00000529540	KMT2D	O14686	5537 aa		5.41	□□□□□ -1.54

Retrieved 100 of 20,778 RNA–protein pairs in 145.3 ms