RNA–Protein interactions for RNA: ENST00000529430.1

CLP1-203, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 5 BASIC

Gene CLP1, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-203ENST00000529430 J3QL48 77 aa6.37□□□□□ -1.39
CLP1-203ENST00000529430 PRAC1Q96KF2 57 aa6.36□□□□□ -1.39
CLP1-203ENST00000529430 DMBT1Q9UGM3 2413 aaPredicted RBP6.34□□□□□ -1.39
CLP1-203ENST00000529430 HERC2O95714 4834 aa6.33□□□□□ -1.4
CLP1-203ENST00000529430 ADM2Q7Z4H4 148 aa6.31□□□□□ -1.4
CLP1-203ENST00000529430 LINC01554Q52M75 96 aa6.28□□□□□ -1.4
CLP1-203ENST00000529430 ABCA13Q86UQ4 5058 aa6.24□□□□□ -1.41
CLP1-203ENST00000529430 RPL37P61927 97 aaKnown RBP6.23□□□□□ -1.41
CLP1-203ENST00000529430 COX6B2Q6YFQ2 88 aa6.23□□□□□ -1.41
CLP1-203ENST00000529430 KRTAP3-1Q9BYR8 98 aa6.22□□□□□ -1.41
CLP1-203ENST00000529430 CSAG1Q6PB30 78 aa6.2□□□□□ -1.42
CLP1-203ENST00000529430 A0A1B0GU33 70 aa6.19□□□□□ -1.42
CLP1-203ENST00000529430 TPRXLQ17RH7 258 aa6.18□□□□□ -1.42
CLP1-203ENST00000529430 H0YAA0 97 aa6.18□□□□□ -1.42
CLP1-203ENST00000529430 XP32Q5T750 250 aa6.18□□□□□ -1.42
CLP1-203ENST00000529430 H1FX-AS1Q4G0G2 97 aa6.17□□□□□ -1.42
CLP1-203ENST00000529430 K7ERS5 55 aa6.08□□□□□ -1.44
CLP1-203ENST00000529430 KRTAP25-1Q3LHN0 102 aa6.06□□□□□ -1.44
CLP1-203ENST00000529430 PCLOQ9Y6V0 5065 aa6.04□□□□□ -1.44
CLP1-203ENST00000529430 SEC61BP60468 96 aaKnown RBP6.01□□□□□ -1.45
CLP1-203ENST00000529430 S4R3F8 94 aa6.01□□□□□ -1.45
CLP1-203ENST00000529430 LCE2DQ5TA82 110 aaPredicted RBP6□□□□□ -1.45
CLP1-203ENST00000529430 KRTAP3-3Q9BYR6 98 aa5.98□□□□□ -1.45
CLP1-203ENST00000529430 LPAP08519 4548 aa5.97□□□□□ -1.45
CLP1-203ENST00000529430 HERC1Q15751 4861 aa5.94□□□□□ -1.46
CLP1-203ENST00000529430 ROMO1P60602 79 aa5.93□□□□□ -1.46
CLP1-203ENST00000529430 LRP2P98164 4655 aa5.93□□□□□ -1.46
CLP1-203ENST00000529430 KRTAP10-6P60371 365 aaPredicted RBP5.9□□□□□ -1.46
CLP1-203ENST00000529430 KRTAP3-2Q9BYR7 98 aa5.86□□□□□ -1.47
CLP1-203ENST00000529430 HMCN2Q8NDA2 5059 aa5.85□□□□□ -1.47
CLP1-203ENST00000529430 H3BS24 57 aa5.83□□□□□ -1.48
CLP1-203ENST00000529430 KRTAP13-4Q3LI77 160 aa5.82□□□□□ -1.48
CLP1-203ENST00000529430 CRIPTQ9P021 101 aa5.8□□□□□ -1.48
CLP1-203ENST00000529430 A0A0D9SG42 100 aa5.8□□□□□ -1.48
CLP1-203ENST00000529430 MUC17Q685J3 4493 aa5.77□□□□□ -1.49
CLP1-203ENST00000529430 P0C880 135 aa5.77□□□□□ -1.49
CLP1-203ENST00000529430 KRTAP4-1Q9BYQ7 146 aa5.73□□□□□ -1.49
CLP1-203ENST00000529430 M0QZ58 72 aa5.72□□□□□ -1.49
CLP1-203ENST00000529430 SPINT4Q6UDR6 99 aa5.67□□□□□ -1.5
CLP1-203ENST00000529430 KRTAP12-2P59991 146 aa5.66□□□□□ -1.5
CLP1-203ENST00000529430 KRTAP12-1P59990 96 aa5.65□□□□□ -1.51
CLP1-203ENST00000529430 MUC2Q02817 5179 aa5.62□□□□□ -1.51
CLP1-203ENST00000529430 C10orf95Q9H7T3 257 aa5.61□□□□□ -1.51
CLP1-203ENST00000529430 UBR4Q5T4S7 5183 aa5.58□□□□□ -1.52
CLP1-203ENST00000529430 R4GN34 69 aa5.57□□□□□ -1.52
CLP1-203ENST00000529430 KRTAP19-2Q3LHN2 52 aa5.55□□□□□ -1.52
CLP1-203ENST00000529430 KRTAP15-1Q3LI76 137 aa5.54□□□□□ -1.52
CLP1-203ENST00000529430 RNF213Q63HN8 5207 aa5.51□□□□□ -1.53
CLP1-203ENST00000529430 LCE2CQ5TA81 110 aa5.47□□□□□ -1.53
CLP1-203ENST00000529430 M0R2T5 61 aa5.46□□□□□ -1.54
CLP1-203ENST00000529430 FLGP20930 4061 aaPredicted RBP5.46□□□□□ -1.54
CLP1-203ENST00000529430 LORP23490 312 aaPredicted RBP5.42□□□□□ -1.54
CLP1-203ENST00000529430 NDUFAF8A1L188 74 aa5.41□□□□□ -1.54
CLP1-203ENST00000529430 MT1HP80294 61 aa5.4□□□□□ -1.54
CLP1-203ENST00000529430 FAT4Q6V0I7 4981 aa5.37□□□□□ -1.55
CLP1-203ENST00000529430 CAMK2N1Q7Z7J9 78 aa5.27□□□□□ -1.57
CLP1-203ENST00000529430 PP632Q6XCG6 107 aa5.26□□□□□ -1.57
CLP1-203ENST00000529430 PLAC4Q8WY50 150 aa5.26□□□□□ -1.57
CLP1-203ENST00000529430 A0A0A0MQY5 61 aa5.21□□□□□ -1.58
CLP1-203ENST00000529430 KRTAP10-10P60014 251 aa5.2□□□□□ -1.58
CLP1-203ENST00000529430 LCE2AQ5TA79 106 aaPredicted RBP5.19□□□□□ -1.58
CLP1-203ENST00000529430 KRTAP9-8Q9BYQ0 159 aa5.18□□□□□ -1.58
CLP1-203ENST00000529430 MT2AP02795 61 aa5.17□□□□□ -1.58
CLP1-203ENST00000529430 SPRR2GQ9BYE4 73 aa5.14□□□□□ -1.59
CLP1-203ENST00000529430 MT1FP04733 61 aa5.13□□□□□ -1.59
CLP1-203ENST00000529430 KRTAP23-1A1A580 65 aa5.09□□□□□ -1.59
CLP1-203ENST00000529430 LUZP6Q538Z0 58 aa5.09□□□□□ -1.6
CLP1-203ENST00000529430 TNP1P09430 55 aa5.08□□□□□ -1.6
CLP1-203ENST00000529430 KRTAP19-1Q8IUB9 90 aa5.08□□□□□ -1.6
CLP1-203ENST00000529430 KRTAP9-3Q9BYQ3 159 aa4.99□□□□□ -1.61
CLP1-203ENST00000529430 LCE2BO14633 110 aa4.98□□□□□ -1.61
CLP1-203ENST00000529430 KRTAP19-8Q3LI54 63 aa4.96□□□□□ -1.62
CLP1-203ENST00000529430 SPRR5A0A1B0GTR4 108 aa4.9□□□□□ -1.63
CLP1-203ENST00000529430 MT1BP07438 61 aa4.84□□□□□ -1.63
CLP1-203ENST00000529430 KRTAP10-5P60370 271 aa4.77□□□□□ -1.65
CLP1-203ENST00000529430 PRO2289Q9P1D8 64 aa4.77□□□□□ -1.65
CLP1-203ENST00000529430 MT1XP80297 61 aa4.76□□□□□ -1.65
CLP1-203ENST00000529430 LCE3AQ5TA76 89 aa4.75□□□□□ -1.65
CLP1-203ENST00000529430 KRTAP8-1Q8IUC2 63 aa4.69□□□□□ -1.66
CLP1-203ENST00000529430 USH2AO75445 5202 aa4.67□□□□□ -1.66
CLP1-203ENST00000529430 KRTAP10-12P60413 245 aa4.66□□□□□ -1.66
CLP1-203ENST00000529430 KRTAP9-2Q9BYQ4 174 aa4.6□□□□□ -1.67
CLP1-203ENST00000529430 KRTAP19-6Q3LI70 58 aa4.6□□□□□ -1.67
CLP1-203ENST00000529430 KRTAP10-7P60409 375 aaPredicted RBP4.59□□□□□ -1.67
CLP1-203ENST00000529430 FSIP2Q5CZC0 6907 aa4.57□□□□□ -1.68
CLP1-203ENST00000529430 KRTAP12-3P60328 96 aa4.57□□□□□ -1.68
CLP1-203ENST00000529430 SSPOA2VEC9 5147 aa4.53□□□□□ -1.68
CLP1-203ENST00000529430 INE1O15225 51 aa4.48□□□□□ -1.69
CLP1-203ENST00000529430 CRCT1Q9UGL9 99 aa4.45□□□□□ -1.7
CLP1-203ENST00000529430 KRTAP19-5Q3LI72 72 aa4.4□□□□□ -1.71
CLP1-203ENST00000529430 FCGBPQ9Y6R7 5405 aaPredicted RBP4.36□□□□□ -1.71
CLP1-203ENST00000529430 KRTAP4-8A0A0G2JLE6 195 aa4.32□□□□□ -1.72
CLP1-203ENST00000529430 KRTAP4-8Q9BYQ9 185 aa4.32□□□□□ -1.72
CLP1-203ENST00000529430 KRTAP19-4Q3LI73 84 aa4.3□□□□□ -1.72
CLP1-203ENST00000529430 LCE3CQ5T5A8 94 aa4.3□□□□□ -1.72
CLP1-203ENST00000529430 KRTAP9-6A0A140TA67 174 aa4.27□□□□□ -1.73
CLP1-203ENST00000529430 KMT2DO14686 5537 aa4.27□□□□□ -1.73
CLP1-203ENST00000529430 KRTAP19-7Q3SYF9 63 aa4.25□□□□□ -1.73
CLP1-203ENST00000529430 LOC100996750A0A140TA64 210 aa4.18□□□□□ -1.74
CLP1-203ENST00000529430 KRTAP4-6Q9BYQ5 205 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms