RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 H1FX-AS1Q4G0G2 97 aa5.66□□□□□ -1.5
CAPN1-217ENST00000529133 M0R2T5 61 aa5.61□□□□□ -1.51
CAPN1-217ENST00000529133 Q1T7F1 81 aa5.61□□□□□ -1.51
CAPN1-217ENST00000529133 FLGP20930 4061 aaPredicted RBP5.58□□□□□ -1.52
CAPN1-217ENST00000529133 A8MUN3 132 aa5.57□□□□□ -1.52
CAPN1-217ENST00000529133 COA5Q86WW8 74 aa5.56□□□□□ -1.52
CAPN1-217ENST00000529133 ACYP2P14621 99 aa5.55□□□□□ -1.52
CAPN1-217ENST00000529133 KRTAP10-6P60371 365 aaPredicted RBP5.55□□□□□ -1.52
CAPN1-217ENST00000529133 DMAC1Q96GE9 116 aa5.55□□□□□ -1.52
CAPN1-217ENST00000529133 S4R3F8 94 aa5.55□□□□□ -1.52
CAPN1-217ENST00000529133 LORP23490 312 aaPredicted RBP5.53□□□□□ -1.52
CAPN1-217ENST00000529133 LCA10Q71F78 164 aa5.52□□□□□ -1.53
CAPN1-217ENST00000529133 SVIPQ8NHG7 77 aa5.48□□□□□ -1.53
CAPN1-217ENST00000529133 KRTAP3-3Q9BYR6 98 aa5.48□□□□□ -1.53
CAPN1-217ENST00000529133 KRTAP9-8Q9BYQ0 159 aa5.46□□□□□ -1.54
CAPN1-217ENST00000529133 CSAG1Q6PB30 78 aa5.45□□□□□ -1.54
CAPN1-217ENST00000529133 LINC01558Q9Y6Z2 57 aa5.45□□□□□ -1.54
CAPN1-217ENST00000529133 CHKB-CPT1BH3BT56 60 aa5.43□□□□□ -1.54
CAPN1-217ENST00000529133 MT2AP02795 61 aa5.43□□□□□ -1.54
CAPN1-217ENST00000529133 PRO0628Q9UI54 55 aa5.42□□□□□ -1.54
CAPN1-217ENST00000529133 SPTSSBQ8NFR3 76 aa5.4□□□□□ -1.54
CAPN1-217ENST00000529133 MT1FP04733 61 aa5.39□□□□□ -1.55
CAPN1-217ENST00000529133 PRR15LQ9BU68 103 aa5.39□□□□□ -1.55
CAPN1-217ENST00000529133 Q5VV11 94 aa5.38□□□□□ -1.55
CAPN1-217ENST00000529133 PSPHP1O15172 72 aa5.35□□□□□ -1.55
CAPN1-217ENST00000529133 KRTAP10-10P60014 251 aa5.35□□□□□ -1.55
CAPN1-217ENST00000529133 BRK1Q8WUW1 75 aa5.34□□□□□ -1.55
CAPN1-217ENST00000529133 H0YAA0 97 aa5.3□□□□□ -1.56
CAPN1-217ENST00000529133 LCE2DQ5TA82 110 aaPredicted RBP5.29□□□□□ -1.56
CAPN1-217ENST00000529133 A0A1B0GU69 56 aa5.28□□□□□ -1.56
CAPN1-217ENST00000529133 A6NED7 52 aa5.28□□□□□ -1.56
CAPN1-217ENST00000529133 CDC42SE1Q9NRR8 79 aa5.28□□□□□ -1.56
CAPN1-217ENST00000529133 ADM2Q7Z4H4 148 aa5.27□□□□□ -1.57
CAPN1-217ENST00000529133 KRTAP9-3Q9BYQ3 159 aa5.27□□□□□ -1.57
CAPN1-217ENST00000529133 SEC61GP60059 68 aa5.25□□□□□ -1.57
CAPN1-217ENST00000529133 KRTAP9-2Q9BYQ4 174 aa5.24□□□□□ -1.57
CAPN1-217ENST00000529133 KRTAP3-2Q9BYR7 98 aa5.22□□□□□ -1.57
CAPN1-217ENST00000529133 UQCR11O14957 56 aa5.21□□□□□ -1.58
CAPN1-217ENST00000529133 P0C880 135 aa5.2□□□□□ -1.58
CAPN1-217ENST00000529133 LCE2BO14633 110 aa5.18□□□□□ -1.58
CAPN1-217ENST00000529133 CRIPTQ9P021 101 aa5.18□□□□□ -1.58
CAPN1-217ENST00000529133 KRTAP19-1Q8IUB9 90 aa5.17□□□□□ -1.58
CAPN1-217ENST00000529133 SPRR2GQ9BYE4 73 aa5.16□□□□□ -1.58
CAPN1-217ENST00000529133 SPATA8Q6RVD6 105 aa5.15□□□□□ -1.59
CAPN1-217ENST00000529133 MIR22HGQ0VDD5 57 aa5.11□□□□□ -1.59
CAPN1-217ENST00000529133 M0QZ58 72 aa5.08□□□□□ -1.6
CAPN1-217ENST00000529133 PMAIP1Q13794 54 aa5.08□□□□□ -1.6
CAPN1-217ENST00000529133 R4GN34 69 aa5.08□□□□□ -1.6
CAPN1-217ENST00000529133 USH2AO75445 5202 aa5.07□□□□□ -1.6
CAPN1-217ENST00000529133 KRTAP19-8Q3LI54 63 aa5.07□□□□□ -1.6
CAPN1-217ENST00000529133 A0A1B0GU33 70 aa5.04□□□□□ -1.6
CAPN1-217ENST00000529133 MT1BP07438 61 aa5.04□□□□□ -1.6
CAPN1-217ENST00000529133 A6NN06 94 aa5.03□□□□□ -1.6
CAPN1-217ENST00000529133 A8MU10 97 aa5.02□□□□□ -1.61
CAPN1-217ENST00000529133 KRTAP13-4Q3LI77 160 aa5.01□□□□□ -1.61
CAPN1-217ENST00000529133 CRCT1Q9UGL9 99 aa5.01□□□□□ -1.61
CAPN1-217ENST00000529133 KTN1-AS1Q86SY8 53 aa5□□□□□ -1.61
CAPN1-217ENST00000529133 LINC01554Q52M75 96 aa4.98□□□□□ -1.61
CAPN1-217ENST00000529133 FSIP2Q5CZC0 6907 aa4.97□□□□□ -1.61
CAPN1-217ENST00000529133 KRTAP9-6A0A140TA67 174 aa4.96□□□□□ -1.62
CAPN1-217ENST00000529133 K7ERS5 55 aa4.95□□□□□ -1.62
CAPN1-217ENST00000529133 SSPOA2VEC9 5147 aa4.94□□□□□ -1.62
CAPN1-217ENST00000529133 KRTAP19-6Q3LI70 58 aa4.94□□□□□ -1.62
CAPN1-217ENST00000529133 PLAC4Q8WY50 150 aa4.9□□□□□ -1.63
CAPN1-217ENST00000529133 A0A0D9SG42 100 aa4.87□□□□□ -1.63
CAPN1-217ENST00000529133 KRTAP10-5P60370 271 aa4.84□□□□□ -1.63
CAPN1-217ENST00000529133 MT1XP80297 61 aa4.8□□□□□ -1.64
CAPN1-217ENST00000529133 KRTAP12-1P59990 96 aa4.79□□□□□ -1.64
CAPN1-217ENST00000529133 FCGBPQ9Y6R7 5405 aaPredicted RBP4.77□□□□□ -1.65
CAPN1-217ENST00000529133 SPINT4Q6UDR6 99 aa4.77□□□□□ -1.65
CAPN1-217ENST00000529133 KRTAP12-2P59991 146 aa4.76□□□□□ -1.65
CAPN1-217ENST00000529133 PRO2289Q9P1D8 64 aa4.76□□□□□ -1.65
CAPN1-217ENST00000529133 CAMK2N1Q7Z7J9 78 aa4.73□□□□□ -1.65
CAPN1-217ENST00000529133 ROMO1P60602 79 aa4.69□□□□□ -1.66
CAPN1-217ENST00000529133 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.66□□□□□ -1.66
CAPN1-217ENST00000529133 PRAC1Q96KF2 57 aa4.61□□□□□ -1.67
CAPN1-217ENST00000529133 KRTAP25-1Q3LHN0 102 aa4.6□□□□□ -1.67
CAPN1-217ENST00000529133 KRTAP10-7P60409 375 aaPredicted RBP4.59□□□□□ -1.67
CAPN1-217ENST00000529133 MACF1Q9UPN3 7388 aaKnown RBP4.58□□□□□ -1.68
CAPN1-217ENST00000529133 KRTAP10-12P60413 245 aa4.55□□□□□ -1.68
CAPN1-217ENST00000529133 C10orf95Q9H7T3 257 aa4.55□□□□□ -1.68
CAPN1-217ENST00000529133 KRTAP9-7A8MTY7 169 aa4.49□□□□□ -1.69
CAPN1-217ENST00000529133 KRTAP4-8A0A0G2JLE6 195 aa4.48□□□□□ -1.69
CAPN1-217ENST00000529133 KRTAP4-8Q9BYQ9 185 aa4.48□□□□□ -1.69
CAPN1-217ENST00000529133 SYNE2Q8WXH0 6885 aaKnown RBP4.46□□□□□ -1.7
CAPN1-217ENST00000529133 KRTAP6-3Q3LI67 103 aa4.46□□□□□ -1.7
CAPN1-217ENST00000529133 TNP1P09430 55 aa4.45□□□□□ -1.7
CAPN1-217ENST00000529133 KRTAP8-1Q8IUC2 63 aa4.44□□□□□ -1.7
CAPN1-217ENST00000529133 KMT2DO14686 5537 aa4.4□□□□□ -1.7
CAPN1-217ENST00000529133 KRTAP5-9P26371 169 aa4.4□□□□□ -1.71
CAPN1-217ENST00000529133 PP632Q6XCG6 107 aa4.4□□□□□ -1.71
CAPN1-217ENST00000529133 KRTAP23-1A1A580 65 aa4.36□□□□□ -1.71
CAPN1-217ENST00000529133 SPRR2FQ96RM1 72 aa4.35□□□□□ -1.71
CAPN1-217ENST00000529133 LCE3AQ5TA76 89 aa4.34□□□□□ -1.71
CAPN1-217ENST00000529133 KRTAP19-7Q3SYF9 63 aa4.29□□□□□ -1.72
CAPN1-217ENST00000529133 KRTAP19-5Q3LI72 72 aa4.26□□□□□ -1.73
CAPN1-217ENST00000529133 MT1EP04732 61 aa4.24□□□□□ -1.73
CAPN1-217ENST00000529133 NEBP20929 6669 aa4.22□□□□□ -1.73
CAPN1-217ENST00000529133 SPRR2EP22531 72 aa4.21□□□□□ -1.74
CAPN1-217ENST00000529133 SPRR2BP35325 72 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms