RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 IMUPQ9GZP8 106 aa7.74□□□□□ -1.17
HIF3A-211ENST00000528563 MP68P56378 58 aa7.72□□□□□ -1.17
HIF3A-211ENST00000528563 KLKP1Q107X0 134 aa7.72□□□□□ -1.17
HIF3A-211ENST00000528563 ANAPC13Q9BS18 74 aa7.71□□□□□ -1.18
HIF3A-211ENST00000528563 FCGBPQ9Y6R7 5405 aaPredicted RBP7.69□□□□□ -1.18
HIF3A-211ENST00000528563 FAM236AA0A1B0GUQ0 79 aa7.68□□□□□ -1.18
HIF3A-211ENST00000528563 FAM236BA0A1B0GV22 79 aa7.68□□□□□ -1.18
HIF3A-211ENST00000528563 KRTAP19-6Q3LI70 58 aa7.67□□□□□ -1.18
HIF3A-211ENST00000528563 A8MUN3 132 aa7.66□□□□□ -1.18
HIF3A-211ENST00000528563 H3BPC8 53 aa7.65□□□□□ -1.18
HIF3A-211ENST00000528563 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.62□□□□□ -1.19
HIF3A-211ENST00000528563 NDUFC1O43677 76 aa7.62□□□□□ -1.19
HIF3A-211ENST00000528563 SPRR2GQ9BYE4 73 aa7.6□□□□□ -1.19
HIF3A-211ENST00000528563 H0YAA0 97 aa7.54□□□□□ -1.2
HIF3A-211ENST00000528563 KRTAP19-8Q3LI54 63 aa7.54□□□□□ -1.2
HIF3A-211ENST00000528563 MT1BP07438 61 aa7.51□□□□□ -1.21
HIF3A-211ENST00000528563 TRAV7A0A075B6U4 112 aa7.5□□□□□ -1.21
HIF3A-211ENST00000528563 CCDC179H3BU77 68 aa7.5□□□□□ -1.21
HIF3A-211ENST00000528563 SMIM20Q8N5G0 67 aa7.5□□□□□ -1.21
HIF3A-211ENST00000528563 CRIPTQ9P021 101 aa7.5□□□□□ -1.21
HIF3A-211ENST00000528563 DMAC1Q96GE9 116 aa7.49□□□□□ -1.21
HIF3A-211ENST00000528563 KRTAP9-7A8MTY7 169 aa7.48□□□□□ -1.21
HIF3A-211ENST00000528563 Q5VV11 94 aa7.48□□□□□ -1.21
HIF3A-211ENST00000528563 COX7CP15954 63 aa7.45□□□□□ -1.22
HIF3A-211ENST00000528563 ADM2Q7Z4H4 148 aa7.43□□□□□ -1.22
HIF3A-211ENST00000528563 MACF1Q9UPN3 7388 aaKnown RBP7.42□□□□□ -1.22
HIF3A-211ENST00000528563 SERP2Q8N6R1 65 aa7.41□□□□□ -1.22
HIF3A-211ENST00000528563 A6NN06 94 aa7.34□□□□□ -1.23
HIF3A-211ENST00000528563 ACYP2P14621 99 aa7.34□□□□□ -1.23
HIF3A-211ENST00000528563 SYNE2Q8WXH0 6885 aaKnown RBP7.32□□□□□ -1.24
HIF3A-211ENST00000528563 SNURFQ9Y675 71 aa7.31□□□□□ -1.24
HIF3A-211ENST00000528563 P0C880 135 aa7.3□□□□□ -1.24
HIF3A-211ENST00000528563 KRTAP10-5P60370 271 aa7.3□□□□□ -1.24
HIF3A-211ENST00000528563 KRTAP3-2Q9BYR7 98 aa7.3□□□□□ -1.24
HIF3A-211ENST00000528563 TMEM258P61165 79 aa7.29□□□□□ -1.24
HIF3A-211ENST00000528563 C20orf197Q8N268 126 aa7.26□□□□□ -1.25
HIF3A-211ENST00000528563 SPANXA2-OT1Q8N9U9 137 aa7.23□□□□□ -1.25
HIF3A-211ENST00000528563 RPS28P62857 69 aaKnown RBP7.22□□□□□ -1.25
HIF3A-211ENST00000528563 R4GN34 69 aa7.22□□□□□ -1.25
HIF3A-211ENST00000528563 KRTAP6-3Q3LI67 103 aa7.2□□□□□ -1.26
HIF3A-211ENST00000528563 SPTSSBQ8NFR3 76 aa7.2□□□□□ -1.26
HIF3A-211ENST00000528563 M0QZ58 72 aa7.17□□□□□ -1.26
HIF3A-211ENST00000528563 CYSTM1Q9H1C7 97 aa7.17□□□□□ -1.26
HIF3A-211ENST00000528563 CHKB-CPT1BH3BT56 60 aa7.16□□□□□ -1.26
HIF3A-211ENST00000528563 PLAC4Q8WY50 150 aa7.12□□□□□ -1.27
HIF3A-211ENST00000528563 ATP5EP56381 51 aaPredicted RBP7.11□□□□□ -1.27
HIF3A-211ENST00000528563 H7BZZ5 65 aa7.11□□□□□ -1.27
HIF3A-211ENST00000528563 MT1XP80297 61 aa7.08□□□□□ -1.28
HIF3A-211ENST00000528563 PRO2289Q9P1D8 64 aa7.05□□□□□ -1.28
HIF3A-211ENST00000528563 SERP1Q9Y6X1 66 aa7.05□□□□□ -1.28
HIF3A-211ENST00000528563 LINC01554Q52M75 96 aa7.04□□□□□ -1.28
HIF3A-211ENST00000528563 COA5Q86WW8 74 aa6.99□□□□□ -1.29
HIF3A-211ENST00000528563 SMIM26A0A096LP01 95 aa6.93□□□□□ -1.3
HIF3A-211ENST00000528563 KRTAP5-9P26371 169 aa6.93□□□□□ -1.3
HIF3A-211ENST00000528563 KRTAP12-2P59991 146 aa6.88□□□□□ -1.31
HIF3A-211ENST00000528563 KRTAP13-4Q3LI77 160 aa6.88□□□□□ -1.31
HIF3A-211ENST00000528563 NEBP20929 6669 aa6.85□□□□□ -1.31
HIF3A-211ENST00000528563 KMT2DO14686 5537 aa6.81□□□□□ -1.32
HIF3A-211ENST00000528563 SEC61GP60059 68 aa6.8□□□□□ -1.32
HIF3A-211ENST00000528563 MUC12Q9UKN1 5478 aa6.79□□□□□ -1.32
HIF3A-211ENST00000528563 KRTAP10-7P60409 375 aaPredicted RBP6.75□□□□□ -1.33
HIF3A-211ENST00000528563 KRTAP8-1Q8IUC2 63 aa6.74□□□□□ -1.33
HIF3A-211ENST00000528563 PRO0628Q9UI54 55 aa6.73□□□□□ -1.33
HIF3A-211ENST00000528563 KRTAP4-8A0A0G2JLE6 195 aa6.73□□□□□ -1.33
HIF3A-211ENST00000528563 KRTAP10-12P60413 245 aa6.73□□□□□ -1.33
HIF3A-211ENST00000528563 KRTAP4-8Q9BYQ9 185 aa6.73□□□□□ -1.33
HIF3A-211ENST00000528563 SPRR2FQ96RM1 72 aa6.72□□□□□ -1.33
HIF3A-211ENST00000528563 A0A1B0GU33 70 aa6.71□□□□□ -1.34
HIF3A-211ENST00000528563 Q1T7F1 81 aa6.69□□□□□ -1.34
HIF3A-211ENST00000528563 V9GYY9 64 aa6.69□□□□□ -1.34
HIF3A-211ENST00000528563 SPATA8Q6RVD6 105 aa6.68□□□□□ -1.34
HIF3A-211ENST00000528563 MDN1Q9NU22 5596 aa6.66□□□□□ -1.34
HIF3A-211ENST00000528563 CAMK2N1Q7Z7J9 78 aa6.66□□□□□ -1.34
HIF3A-211ENST00000528563 A0A0D9SG42 100 aa6.65□□□□□ -1.35
HIF3A-211ENST00000528563 A0A1B0GU69 56 aa6.62□□□□□ -1.35
HIF3A-211ENST00000528563 SPRR2EP22531 72 aa6.58□□□□□ -1.36
HIF3A-211ENST00000528563 SPRR2BP35325 72 aa6.58□□□□□ -1.36
HIF3A-211ENST00000528563 SPRR2AP35326 72 aa6.58□□□□□ -1.36
HIF3A-211ENST00000528563 KRTAP20-1Q3LI63 56 aa6.56□□□□□ -1.36
HIF3A-211ENST00000528563 LCE1AQ5T7P2 110 aa6.56□□□□□ -1.36
HIF3A-211ENST00000528563 KRTAP12-1P59990 96 aa6.55□□□□□ -1.36
HIF3A-211ENST00000528563 SPINT4Q6UDR6 99 aa6.54□□□□□ -1.36
HIF3A-211ENST00000528563 BRK1Q8WUW1 75 aa6.54□□□□□ -1.36
HIF3A-211ENST00000528563 PSPHP1O15172 72 aa6.5□□□□□ -1.37
HIF3A-211ENST00000528563 KRTAP2-3P0C7H8 128 aa6.47□□□□□ -1.37
HIF3A-211ENST00000528563 KRTAP2-4Q9BYR9 128 aa6.47□□□□□ -1.37
HIF3A-211ENST00000528563 LINC01558Q9Y6Z2 57 aa6.47□□□□□ -1.37
HIF3A-211ENST00000528563 A8MU10 97 aa6.46□□□□□ -1.38
HIF3A-211ENST00000528563 PRR15LQ9BU68 103 aa6.45□□□□□ -1.38
HIF3A-211ENST00000528563 SPRR2DP22532 72 aa6.36□□□□□ -1.39
HIF3A-211ENST00000528563 A6NED7 52 aa6.34□□□□□ -1.39
HIF3A-211ENST00000528563 KRTAP19-7Q3SYF9 63 aa6.33□□□□□ -1.4
HIF3A-211ENST00000528563 PMAIP1Q13794 54 aa6.32□□□□□ -1.4
HIF3A-211ENST00000528563 CDC42SE1Q9NRR8 79 aa6.3□□□□□ -1.4
HIF3A-211ENST00000528563 UQCR11O14957 56 aa6.27□□□□□ -1.41
HIF3A-211ENST00000528563 KRTAP2-2Q9BYT5 123 aa6.27□□□□□ -1.41
HIF3A-211ENST00000528563 KRTAP2-1Q9BYU5 128 aa6.27□□□□□ -1.41
HIF3A-211ENST00000528563 C10orf95Q9H7T3 257 aa6.27□□□□□ -1.41
HIF3A-211ENST00000528563 MT1EP04732 61 aa6.25□□□□□ -1.41
HIF3A-211ENST00000528563 KRTAP19-5Q3LI72 72 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms