RNA–Protein interactions for RNA: ENST00000528498.5

RDX-204, Transcript of radixin, humanhuman

TSL 1 (best) BASIC

Gene RDX, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-204ENST00000528498 RPL37P61927 97 aaKnown RBP11.49□□□□□ -0.57
RDX-204ENST00000528498 KTN1-AS1Q86SY8 53 aa11.48□□□□□ -0.57
RDX-204ENST00000528498 J3QL48 77 aa11.38□□□□□ -0.59
RDX-204ENST00000528498 KRTAP3-1Q9BYR8 98 aa11.38□□□□□ -0.59
RDX-204ENST00000528498 SEC61GP60059 68 aa11.36□□□□□ -0.59
RDX-204ENST00000528498 TPRXLQ17RH7 258 aa11.36□□□□□ -0.59
RDX-204ENST00000528498 SPATA8Q6RVD6 105 aa11.35□□□□□ -0.59
RDX-204ENST00000528498 PCLOQ9Y6V0 5065 aa11.34□□□□□ -0.59
RDX-204ENST00000528498 UQCR11O14957 56 aa11.34□□□□□ -0.59
RDX-204ENST00000528498 MIR22HGQ0VDD5 57 aa11.3□□□□□ -0.6
RDX-204ENST00000528498 COX6B2Q6YFQ2 88 aa11.2□□□□□ -0.62
RDX-204ENST00000528498 HERC1Q15751 4861 aa11.19□□□□□ -0.62
RDX-204ENST00000528498 RBM12B-AS1Q9P1G2 102 aa11.16□□□□□ -0.62
RDX-204ENST00000528498 MUC17Q685J3 4493 aa10.97□□□□□ -0.65
RDX-204ENST00000528498 PRAC1Q96KF2 57 aa10.97□□□□□ -0.65
RDX-204ENST00000528498 HMCN2Q8NDA2 5059 aa10.96□□□□□ -0.65
RDX-204ENST00000528498 ADM2Q7Z4H4 148 aa10.96□□□□□ -0.66
RDX-204ENST00000528498 KRTAP4-1Q9BYQ7 146 aa10.95□□□□□ -0.66
RDX-204ENST00000528498 H0YAA0 97 aa10.94□□□□□ -0.66
RDX-204ENST00000528498 A0A1B0GU33 70 aa10.93□□□□□ -0.66
RDX-204ENST00000528498 KRTAP3-3Q9BYR6 98 aa10.93□□□□□ -0.66
RDX-204ENST00000528498 MUC2Q02817 5179 aa10.92□□□□□ -0.66
RDX-204ENST00000528498 SEC61BP60468 96 aaKnown RBP10.92□□□□□ -0.66
RDX-204ENST00000528498 H1FX-AS1Q4G0G2 97 aa10.89□□□□□ -0.67
RDX-204ENST00000528498 S4R3F8 94 aa10.85□□□□□ -0.67
RDX-204ENST00000528498 CSAG1Q6PB30 78 aa10.68□□□□□ -0.7
RDX-204ENST00000528498 KRTAP19-2Q3LHN2 52 aa10.63□□□□□ -0.71
RDX-204ENST00000528498 LINC01554Q52M75 96 aa10.62□□□□□ -0.71
RDX-204ENST00000528498 KRTAP10-6P60371 365 aaPredicted RBP10.6□□□□□ -0.71
RDX-204ENST00000528498 KRTAP3-2Q9BYR7 98 aa10.6□□□□□ -0.71
RDX-204ENST00000528498 UBR4Q5T4S7 5183 aa10.6□□□□□ -0.71
RDX-204ENST00000528498 K7ERS5 55 aa10.59□□□□□ -0.71
RDX-204ENST00000528498 P0C880 135 aa10.53□□□□□ -0.72
RDX-204ENST00000528498 RNF213Q63HN8 5207 aa10.51□□□□□ -0.73
RDX-204ENST00000528498 KRTAP13-4Q3LI77 160 aa10.46□□□□□ -0.73
RDX-204ENST00000528498 FAT4Q6V0I7 4981 aa10.45□□□□□ -0.74
RDX-204ENST00000528498 KRTAP25-1Q3LHN0 102 aa10.42□□□□□ -0.74
RDX-204ENST00000528498 FLGP20930 4061 aaPredicted RBP10.41□□□□□ -0.74
RDX-204ENST00000528498 A0A0D9SG42 100 aa10.39□□□□□ -0.75
RDX-204ENST00000528498 ROMO1P60602 79 aa10.32□□□□□ -0.76
RDX-204ENST00000528498 LCE2CQ5TA81 110 aa10.28□□□□□ -0.76
RDX-204ENST00000528498 CRIPTQ9P021 101 aa10.25□□□□□ -0.77
RDX-204ENST00000528498 LORP23490 312 aaPredicted RBP10.2□□□□□ -0.78
RDX-204ENST00000528498 KRTAP12-2P59991 146 aa10.13□□□□□ -0.79
RDX-204ENST00000528498 M0QZ58 72 aa10.11□□□□□ -0.79
RDX-204ENST00000528498 KRTAP12-1P59990 96 aa10.08□□□□□ -0.8
RDX-204ENST00000528498 SPINT4Q6UDR6 99 aa10.06□□□□□ -0.8
RDX-204ENST00000528498 R4GN34 69 aa10.03□□□□□ -0.8
RDX-204ENST00000528498 MT1HP80294 61 aa10.02□□□□□ -0.8
RDX-204ENST00000528498 M0R2T5 61 aa9.95□□□□□ -0.82
RDX-204ENST00000528498 C10orf95Q9H7T3 257 aa9.91□□□□□ -0.82
RDX-204ENST00000528498 KRTAP9-8Q9BYQ0 159 aa9.7□□□□□ -0.86
RDX-204ENST00000528498 MT2AP02795 61 aa9.7□□□□□ -0.86
RDX-204ENST00000528498 MT1FP04733 61 aa9.69□□□□□ -0.86
RDX-204ENST00000528498 KRTAP10-10P60014 251 aa9.61□□□□□ -0.87
RDX-204ENST00000528498 KRTAP19-1Q8IUB9 90 aa9.6□□□□□ -0.87
RDX-204ENST00000528498 SPRR2GQ9BYE4 73 aa9.54□□□□□ -0.88
RDX-204ENST00000528498 H3BS24 57 aa9.54□□□□□ -0.88
RDX-204ENST00000528498 KRTAP15-1Q3LI76 137 aa9.48□□□□□ -0.89
RDX-204ENST00000528498 CAMK2N1Q7Z7J9 78 aa9.43□□□□□ -0.9
RDX-204ENST00000528498 LCE2AQ5TA79 106 aaPredicted RBP9.4□□□□□ -0.9
RDX-204ENST00000528498 KRTAP9-3Q9BYQ3 159 aa9.32□□□□□ -0.92
RDX-204ENST00000528498 PLAC4Q8WY50 150 aa9.26□□□□□ -0.93
RDX-204ENST00000528498 KRTAP19-8Q3LI54 63 aa9.23□□□□□ -0.93
RDX-204ENST00000528498 MT1BP07438 61 aa9.21□□□□□ -0.94
RDX-204ENST00000528498 NDUFAF8A1L188 74 aa9.2□□□□□ -0.94
RDX-204ENST00000528498 PP632Q6XCG6 107 aa9.19□□□□□ -0.94
RDX-204ENST00000528498 USH2AO75445 5202 aa9.11□□□□□ -0.95
RDX-204ENST00000528498 LCE2BO14633 110 aa9.09□□□□□ -0.95
RDX-204ENST00000528498 TNP1P09430 55 aa9.01□□□□□ -0.97
RDX-204ENST00000528498 MT1XP80297 61 aa8.97□□□□□ -0.97
RDX-204ENST00000528498 KRTAP10-5P60370 271 aa8.96□□□□□ -0.97
RDX-204ENST00000528498 KRTAP23-1A1A580 65 aa8.91□□□□□ -0.98
RDX-204ENST00000528498 FSIP2Q5CZC0 6907 aa8.73□□□□□ -1.01
RDX-204ENST00000528498 LUZP6Q538Z0 58 aa8.7□□□□□ -1.02
RDX-204ENST00000528498 KRTAP10-7P60409 375 aaPredicted RBP8.69□□□□□ -1.02
RDX-204ENST00000528498 LCE3AQ5TA76 89 aa8.68□□□□□ -1.02
RDX-204ENST00000528498 SSPOA2VEC9 5147 aa8.64□□□□□ -1.03
RDX-204ENST00000528498 PRO2289Q9P1D8 64 aa8.64□□□□□ -1.03
RDX-204ENST00000528498 KMT2DO14686 5537 aa8.57□□□□□ -1.04
RDX-204ENST00000528498 KRTAP10-12P60413 245 aa8.54□□□□□ -1.04
RDX-204ENST00000528498 SPRR5A0A1B0GTR4 108 aa8.51□□□□□ -1.05
RDX-204ENST00000528498 KRTAP8-1Q8IUC2 63 aa8.39□□□□□ -1.07
RDX-204ENST00000528498 KRTAP4-8A0A0G2JLE6 195 aa8.36□□□□□ -1.07
RDX-204ENST00000528498 KRTAP4-8Q9BYQ9 185 aa8.36□□□□□ -1.07
RDX-204ENST00000528498 KRTAP19-6Q3LI70 58 aa8.31□□□□□ -1.08
RDX-204ENST00000528498 LCE2DQ5TA82 110 aaPredicted RBP8.3□□□□□ -1.08
RDX-204ENST00000528498 KRTAP12-3P60328 96 aa8.26□□□□□ -1.09
RDX-204ENST00000528498 A0A0A0MQY5 61 aa8.2□□□□□ -1.1
RDX-204ENST00000528498 KRTAP19-5Q3LI72 72 aa8.19□□□□□ -1.1
RDX-204ENST00000528498 FCGBPQ9Y6R7 5405 aaPredicted RBP8.17□□□□□ -1.1
RDX-204ENST00000528498 KRTAP19-7Q3SYF9 63 aa8.01□□□□□ -1.13
RDX-204ENST00000528498 KRTAP9-2Q9BYQ4 174 aa7.98□□□□□ -1.13
RDX-204ENST00000528498 MACF1Q9UPN3 7388 aaKnown RBP7.84□□□□□ -1.15
RDX-204ENST00000528498 MT1EP04732 61 aa7.81□□□□□ -1.16
RDX-204ENST00000528498 MUC12Q9UKN1 5478 aa7.78□□□□□ -1.16
RDX-204ENST00000528498 LCE3CQ5T5A8 94 aa7.73□□□□□ -1.17
RDX-204ENST00000528498 CRCT1Q9UGL9 99 aa7.71□□□□□ -1.18
RDX-204ENST00000528498 MT1LQ93083 61 aa7.7□□□□□ -1.18
RDX-204ENST00000528498 KRTAP4-7Q9BYR0 210 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms