RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 CASC2Q6XLA1 102 aa4.79□□□□□ -1.64
CHD7-208ENST00000528280 MRPL34Q9BQ48 92 aaKnown RBP4.78□□□□□ -1.64
CHD7-208ENST00000528280 KRTAP9-8Q9BYQ0 159 aa4.78□□□□□ -1.64
CHD7-208ENST00000528280 TP53AIP1Q9HCN2 124 aa4.78□□□□□ -1.64
CHD7-208ENST00000528280 C4orf26Q17RF5 130 aa4.77□□□□□ -1.65
CHD7-208ENST00000528280 MMP24-AS1A0A0U1RRL7 71 aa4.76□□□□□ -1.65
CHD7-208ENST00000528280 hDV103S1A0JD37 113 aa4.76□□□□□ -1.65
CHD7-208ENST00000528280 WFDC13Q8IUB5 93 aa4.76□□□□□ -1.65
CHD7-208ENST00000528280 KRTAP19-1Q8IUB9 90 aa4.76□□□□□ -1.65
CHD7-208ENST00000528280 CYP4F30PQ9H0H9 118 aa4.75□□□□□ -1.65
CHD7-208ENST00000528280 NDUFS5O43920 106 aa4.74□□□□□ -1.65
CHD7-208ENST00000528280 SPANXA2-OT1Q8N9U9 137 aa4.74□□□□□ -1.65
CHD7-208ENST00000528280 TRAV22A0A0B4J277 110 aa4.73□□□□□ -1.65
CHD7-208ENST00000528280 H0Y9P7 68 aa4.71□□□□□ -1.66
CHD7-208ENST00000528280 KRTAP10-10P60014 251 aa4.7□□□□□ -1.66
CHD7-208ENST00000528280 Q1T7F1 81 aa4.7□□□□□ -1.66
CHD7-208ENST00000528280 V9GYY9 64 aa4.7□□□□□ -1.66
CHD7-208ENST00000528280 MT2AP02795 61 aa4.69□□□□□ -1.66
CHD7-208ENST00000528280 KRTAP6-3Q3LI67 103 aa4.69□□□□□ -1.66
CHD7-208ENST00000528280 LINC00208Q96KT6 92 aa4.69□□□□□ -1.66
CHD7-208ENST00000528280 H1FX-AS1Q4G0G2 97 aa4.67□□□□□ -1.66
CHD7-208ENST00000528280 C1orf64Q8NEQ6 169 aa4.67□□□□□ -1.66
CHD7-208ENST00000528280 C7orf65Q6ZTY9 151 aa4.66□□□□□ -1.66
CHD7-208ENST00000528280 IGKV2D-30A0A075B6S6 120 aa4.64□□□□□ -1.67
CHD7-208ENST00000528280 MT1FP04733 61 aa4.64□□□□□ -1.67
CHD7-208ENST00000528280 IGKV2-30P06310 120 aa4.64□□□□□ -1.67
CHD7-208ENST00000528280 LOC101927531A0A1B0GV80 90 aa4.63□□□□□ -1.67
CHD7-208ENST00000528280 Q5W150 140 aa4.63□□□□□ -1.67
CHD7-208ENST00000528280 KRTAP9-3Q9BYQ3 159 aa4.63□□□□□ -1.67
CHD7-208ENST00000528280 NEBP20929 6669 aa4.61□□□□□ -1.67
CHD7-208ENST00000528280 KRTAP20-1Q3LI63 56 aa4.59□□□□□ -1.67
CHD7-208ENST00000528280 BRK1Q8WUW1 75 aa4.57□□□□□ -1.68
CHD7-208ENST00000528280 KRTAP19-6Q3LI70 58 aa4.55□□□□□ -1.68
CHD7-208ENST00000528280 COA5Q86WW8 74 aa4.52□□□□□ -1.69
CHD7-208ENST00000528280 PMAIP1Q13794 54 aa4.5□□□□□ -1.69
CHD7-208ENST00000528280 CSAG1Q6PB30 78 aa4.5□□□□□ -1.69
CHD7-208ENST00000528280 ACYP2P14621 99 aa4.48□□□□□ -1.69
CHD7-208ENST00000528280 S4R3F8 94 aa4.48□□□□□ -1.69
CHD7-208ENST00000528280 Q5VV11 94 aa4.47□□□□□ -1.69
CHD7-208ENST00000528280 DMAC1Q96GE9 116 aa4.47□□□□□ -1.69
CHD7-208ENST00000528280 KRTAP3-1Q9BYR8 98 aa4.46□□□□□ -1.7
CHD7-208ENST00000528280 LINC01558Q9Y6Z2 57 aa4.46□□□□□ -1.7
CHD7-208ENST00000528280 MUC12Q9UKN1 5478 aa4.45□□□□□ -1.7
CHD7-208ENST00000528280 SEC61GP60059 68 aa4.45□□□□□ -1.7
CHD7-208ENST00000528280 A8MUN3 132 aa4.42□□□□□ -1.7
CHD7-208ENST00000528280 LCA10Q71F78 164 aa4.42□□□□□ -1.7
CHD7-208ENST00000528280 CDC42SE1Q9NRR8 79 aa4.42□□□□□ -1.7
CHD7-208ENST00000528280 PSPHP1O15172 72 aa4.41□□□□□ -1.7
CHD7-208ENST00000528280 PRR15LQ9BU68 103 aa4.41□□□□□ -1.7
CHD7-208ENST00000528280 CHKB-CPT1BH3BT56 60 aa4.4□□□□□ -1.71
CHD7-208ENST00000528280 KTN1-AS1Q86SY8 53 aa4.4□□□□□ -1.71
CHD7-208ENST00000528280 CRIPTQ9P021 101 aa4.36□□□□□ -1.71
CHD7-208ENST00000528280 A6NN06 94 aa4.35□□□□□ -1.71
CHD7-208ENST00000528280 SPRR2GQ9BYE4 73 aa4.35□□□□□ -1.71
CHD7-208ENST00000528280 KRTAP2-3P0C7H8 128 aa4.34□□□□□ -1.71
CHD7-208ENST00000528280 KRTAP2-4Q9BYR9 128 aa4.34□□□□□ -1.71
CHD7-208ENST00000528280 A6NED7 52 aa4.33□□□□□ -1.72
CHD7-208ENST00000528280 SPTSSBQ8NFR3 76 aa4.33□□□□□ -1.72
CHD7-208ENST00000528280 LOC100996750A0A140TA64 210 aa4.32□□□□□ -1.72
CHD7-208ENST00000528280 KRTAP4-6Q9BYQ5 205 aa4.32□□□□□ -1.72
CHD7-208ENST00000528280 KRTAP19-8Q3LI54 63 aa4.31□□□□□ -1.72
CHD7-208ENST00000528280 A0A1B0GU69 56 aa4.29□□□□□ -1.72
CHD7-208ENST00000528280 H0YAA0 97 aa4.29□□□□□ -1.72
CHD7-208ENST00000528280 KMT2DO14686 5537 aa4.28□□□□□ -1.72
CHD7-208ENST00000528280 MT1BP07438 61 aa4.26□□□□□ -1.73
CHD7-208ENST00000528280 KRTAP5-9P26371 169 aa4.25□□□□□ -1.73
CHD7-208ENST00000528280 UQCR11O14957 56 aa4.23□□□□□ -1.73
CHD7-208ENST00000528280 SPATA8Q6RVD6 105 aa4.22□□□□□ -1.73
CHD7-208ENST00000528280 MDN1Q9NU22 5596 aa4.22□□□□□ -1.73
CHD7-208ENST00000528280 A8MU10 97 aa4.21□□□□□ -1.74
CHD7-208ENST00000528280 KRTAP10-5P60370 271 aa4.21□□□□□ -1.74
CHD7-208ENST00000528280 ADM2Q7Z4H4 148 aa4.21□□□□□ -1.74
CHD7-208ENST00000528280 MIR22HGQ0VDD5 57 aa4.18□□□□□ -1.74
CHD7-208ENST00000528280 KRTAP2-2Q9BYT5 123 aa4.17□□□□□ -1.74
CHD7-208ENST00000528280 KRTAP2-1Q9BYU5 128 aa4.17□□□□□ -1.74
CHD7-208ENST00000528280 PLAC4Q8WY50 150 aa4.14□□□□□ -1.75
CHD7-208ENST00000528280 PRO2289Q9P1D8 64 aa4.14□□□□□ -1.75
CHD7-208ENST00000528280 R4GN34 69 aa4.14□□□□□ -1.75
CHD7-208ENST00000528280 GPR98Q8WXG9 6306 aa4.11□□□□□ -1.75
CHD7-208ENST00000528280 A0A1B0GU33 70 aa4.09□□□□□ -1.75
CHD7-208ENST00000528280 M0QZ58 72 aa4.07□□□□□ -1.76
CHD7-208ENST00000528280 P0C880 135 aa4.07□□□□□ -1.76
CHD7-208ENST00000528280 LINC01554Q52M75 96 aa4.07□□□□□ -1.76
CHD7-208ENST00000528280 SPRR2EP22531 72 aa4.04□□□□□ -1.76
CHD7-208ENST00000528280 SPRR2BP35325 72 aa4.04□□□□□ -1.76
CHD7-208ENST00000528280 SPRR2AP35326 72 aa4.04□□□□□ -1.76
CHD7-208ENST00000528280 H3BS24 57 aa4.03□□□□□ -1.76
CHD7-208ENST00000528280 KRTAP4-8Q9BYQ9 185 aa4.03□□□□□ -1.76
CHD7-208ENST00000528280 K7ERS5 55 aa4.01□□□□□ -1.77
CHD7-208ENST00000528280 MT1XP80297 61 aa4.01□□□□□ -1.77
CHD7-208ENST00000528280 KRTAP12-2P59991 146 aa3.97□□□□□ -1.77
CHD7-208ENST00000528280 SPRR2FQ96RM1 72 aa3.96□□□□□ -1.78
CHD7-208ENST00000528280 PRAC1Q96KF2 57 aa3.94□□□□□ -1.78
CHD7-208ENST00000528280 LCE1AQ5T7P2 110 aa3.93□□□□□ -1.78
CHD7-208ENST00000528280 KRTAP8-1Q8IUC2 63 aa3.93□□□□□ -1.78
CHD7-208ENST00000528280 SPRR2DP22532 72 aa3.91□□□□□ -1.78
CHD7-208ENST00000528280 LCE3BQ5TA77 95 aa3.91□□□□□ -1.78
CHD7-208ENST00000528280 KRTAP25-1Q3LHN0 102 aa3.9□□□□□ -1.79
CHD7-208ENST00000528280 KRTAP4-12Q9BQ66 201 aa3.89□□□□□ -1.79
CHD7-208ENST00000528280 KRTAP13-4Q3LI77 160 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms