RNA–Protein interactions for RNA: ENST00000528062.7

RBM39-243, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best) BASIC

Gene RBM39, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-243ENST00000528062 SPINK1P00995 79 aa7.13□□□□□ -1.27
RBM39-243ENST00000528062 MIR22HGQ0VDD5 57 aa7.13□□□□□ -1.27
RBM39-243ENST00000528062 PRAC1Q96KF2 57 aa7.13□□□□□ -1.27
RBM39-243ENST00000528062 ADM2Q7Z4H4 148 aa7.12□□□□□ -1.27
RBM39-243ENST00000528062 UQCR11O14957 56 aa7.12□□□□□ -1.27
RBM39-243ENST00000528062 LINC00304Q8N9R0 145 aa7.12□□□□□ -1.27
RBM39-243ENST00000528062 SEC61BP60468 96 aaKnown RBP7.09□□□□□ -1.27
RBM39-243ENST00000528062 KRTAP3-3Q9BYR6 98 aa7.06□□□□□ -1.28
RBM39-243ENST00000528062 KRTAP3-2Q9BYR7 98 aa7.06□□□□□ -1.28
RBM39-243ENST00000528062 HMCN2Q8NDA2 5059 aa7.02□□□□□ -1.29
RBM39-243ENST00000528062 RPS29P62273 56 aaKnown RBP7.01□□□□□ -1.29
RBM39-243ENST00000528062 LPAP08519 4548 aa7□□□□□ -1.29
RBM39-243ENST00000528062 C9orf92A6NGG3 77 aa6.99□□□□□ -1.29
RBM39-243ENST00000528062 KRTAP3-1Q9BYR8 98 aa6.97□□□□□ -1.29
RBM39-243ENST00000528062 A8MUU9 505 aa6.96□□□□□ -1.3
RBM39-243ENST00000528062 C20orf166-AS1Q96NR2 134 aa6.96□□□□□ -1.3
RBM39-243ENST00000528062 H0YAA0 97 aa6.92□□□□□ -1.3
RBM39-243ENST00000528062 LRP2P98164 4655 aa6.91□□□□□ -1.3
RBM39-243ENST00000528062 LINC01554Q52M75 96 aa6.89□□□□□ -1.31
RBM39-243ENST00000528062 CSAG1Q6PB30 78 aa6.88□□□□□ -1.31
RBM39-243ENST00000528062 A0A1B0GU33 70 aa6.83□□□□□ -1.32
RBM39-243ENST00000528062 H1FX-AS1Q4G0G2 97 aa6.81□□□□□ -1.32
RBM39-243ENST00000528062 LCE2DQ5TA82 110 aaPredicted RBP6.8□□□□□ -1.32
RBM39-243ENST00000528062 TPRXLQ17RH7 258 aa6.79□□□□□ -1.32
RBM39-243ENST00000528062 COX6B2Q6YFQ2 88 aa6.77□□□□□ -1.33
RBM39-243ENST00000528062 UBR4Q5T4S7 5183 aa6.75□□□□□ -1.33
RBM39-243ENST00000528062 XP32Q5T750 250 aa6.72□□□□□ -1.33
RBM39-243ENST00000528062 MUC17Q685J3 4493 aa6.71□□□□□ -1.34
RBM39-243ENST00000528062 KRTAP25-1Q3LHN0 102 aa6.67□□□□□ -1.34
RBM39-243ENST00000528062 MUC2Q02817 5179 aa6.64□□□□□ -1.35
RBM39-243ENST00000528062 KRTAP10-6P60371 365 aaPredicted RBP6.64□□□□□ -1.35
RBM39-243ENST00000528062 RNF213Q63HN8 5207 aa6.62□□□□□ -1.35
RBM39-243ENST00000528062 RPL37P61927 97 aaKnown RBP6.61□□□□□ -1.35
RBM39-243ENST00000528062 KRTAP13-4Q3LI77 160 aa6.6□□□□□ -1.35
RBM39-243ENST00000528062 CRIPTQ9P021 101 aa6.6□□□□□ -1.35
RBM39-243ENST00000528062 K7ERS5 55 aa6.57□□□□□ -1.36
RBM39-243ENST00000528062 KRTAP4-1Q9BYQ7 146 aa6.55□□□□□ -1.36
RBM39-243ENST00000528062 A0A0D9SG42 100 aa6.52□□□□□ -1.36
RBM39-243ENST00000528062 S4R3F8 94 aa6.52□□□□□ -1.37
RBM39-243ENST00000528062 KRTAP23-1A1A580 65 aa6.51□□□□□ -1.37
RBM39-243ENST00000528062 ROMO1P60602 79 aa6.5□□□□□ -1.37
RBM39-243ENST00000528062 P0C880 135 aa6.49□□□□□ -1.37
RBM39-243ENST00000528062 KRTAP12-2P59991 146 aa6.38□□□□□ -1.39
RBM39-243ENST00000528062 LCE2CQ5TA81 110 aa6.37□□□□□ -1.39
RBM39-243ENST00000528062 FAT4Q6V0I7 4981 aa6.37□□□□□ -1.39
RBM39-243ENST00000528062 LCE2AQ5TA79 106 aaPredicted RBP6.36□□□□□ -1.39
RBM39-243ENST00000528062 KRTAP19-2Q3LHN2 52 aa6.36□□□□□ -1.39
RBM39-243ENST00000528062 C10orf95Q9H7T3 257 aa6.35□□□□□ -1.39
RBM39-243ENST00000528062 KRTAP12-1P59990 96 aa6.31□□□□□ -1.4
RBM39-243ENST00000528062 FLGP20930 4061 aaPredicted RBP6.29□□□□□ -1.4
RBM39-243ENST00000528062 SPINT4Q6UDR6 99 aa6.28□□□□□ -1.4
RBM39-243ENST00000528062 M0QZ58 72 aa6.2□□□□□ -1.42
RBM39-243ENST00000528062 LUZP6Q538Z0 58 aa6.19□□□□□ -1.42
RBM39-243ENST00000528062 LCE2BO14633 110 aa6.19□□□□□ -1.42
RBM39-243ENST00000528062 MT1HP80294 61 aa6.15□□□□□ -1.42
RBM39-243ENST00000528062 KRTAP15-1Q3LI76 137 aa6.13□□□□□ -1.43
RBM39-243ENST00000528062 LORP23490 312 aaPredicted RBP6.06□□□□□ -1.44
RBM39-243ENST00000528062 R4GN34 69 aa6.05□□□□□ -1.44
RBM39-243ENST00000528062 NDUFAF8A1L188 74 aa6.04□□□□□ -1.44
RBM39-243ENST00000528062 M0R2T5 61 aa5.96□□□□□ -1.45
RBM39-243ENST00000528062 KRTAP9-8Q9BYQ0 159 aa5.89□□□□□ -1.47
RBM39-243ENST00000528062 CAMK2N1Q7Z7J9 78 aa5.87□□□□□ -1.47
RBM39-243ENST00000528062 MT2AP02795 61 aa5.84□□□□□ -1.48
RBM39-243ENST00000528062 MT1FP04733 61 aa5.81□□□□□ -1.48
RBM39-243ENST00000528062 PLAC4Q8WY50 150 aa5.78□□□□□ -1.48
RBM39-243ENST00000528062 KRTAP10-10P60014 251 aa5.71□□□□□ -1.5
RBM39-243ENST00000528062 KRTAP9-3Q9BYQ3 159 aa5.69□□□□□ -1.5
RBM39-243ENST00000528062 PP632Q6XCG6 107 aa5.68□□□□□ -1.5
RBM39-243ENST00000528062 KRTAP9-2Q9BYQ4 174 aa5.62□□□□□ -1.51
RBM39-243ENST00000528062 KRTAP19-1Q8IUB9 90 aa5.6□□□□□ -1.51
RBM39-243ENST00000528062 FSIP2Q5CZC0 6907 aa5.59□□□□□ -1.51
RBM39-243ENST00000528062 USH2AO75445 5202 aa5.58□□□□□ -1.52
RBM39-243ENST00000528062 SPRR2GQ9BYE4 73 aa5.55□□□□□ -1.52
RBM39-243ENST00000528062 TNP1P09430 55 aa5.54□□□□□ -1.52
RBM39-243ENST00000528062 SSPOA2VEC9 5147 aa5.47□□□□□ -1.53
RBM39-243ENST00000528062 KRTAP19-8Q3LI54 63 aa5.45□□□□□ -1.54
RBM39-243ENST00000528062 MT1BP07438 61 aa5.44□□□□□ -1.54
RBM39-243ENST00000528062 SPRR5A0A1B0GTR4 108 aa5.4□□□□□ -1.55
RBM39-243ENST00000528062 CRCT1Q9UGL9 99 aa5.34□□□□□ -1.55
RBM39-243ENST00000528062 LCE3AQ5TA76 89 aa5.3□□□□□ -1.56
RBM39-243ENST00000528062 KRTAP19-6Q3LI70 58 aa5.29□□□□□ -1.56
RBM39-243ENST00000528062 KRTAP9-6A0A140TA67 174 aa5.27□□□□□ -1.57
RBM39-243ENST00000528062 FCGBPQ9Y6R7 5405 aaPredicted RBP5.26□□□□□ -1.57
RBM39-243ENST00000528062 KRTAP10-5P60370 271 aa5.19□□□□□ -1.58
RBM39-243ENST00000528062 MT1XP80297 61 aa5.19□□□□□ -1.58
RBM39-243ENST00000528062 KRTAP8-1Q8IUC2 63 aa5.14□□□□□ -1.59
RBM39-243ENST00000528062 PRO2289Q9P1D8 64 aa5.13□□□□□ -1.59
RBM39-243ENST00000528062 MACF1Q9UPN3 7388 aaKnown RBP5.09□□□□□ -1.59
RBM39-243ENST00000528062 KRTAP10-12P60413 245 aa5.03□□□□□ -1.6
RBM39-243ENST00000528062 KRTAP12-3P60328 96 aa5.02□□□□□ -1.61
RBM39-243ENST00000528062 KRTAP10-7P60409 375 aaPredicted RBP5.02□□□□□ -1.61
RBM39-243ENST00000528062 KMT2DO14686 5537 aa5□□□□□ -1.61
RBM39-243ENST00000528062 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.98□□□□□ -1.61
RBM39-243ENST00000528062 SYNE2Q8WXH0 6885 aaKnown RBP4.97□□□□□ -1.61
RBM39-243ENST00000528062 KRTAP4-8A0A0G2JLE6 195 aa4.87□□□□□ -1.63
RBM39-243ENST00000528062 KRTAP4-8Q9BYQ9 185 aa4.87□□□□□ -1.63
RBM39-243ENST00000528062 KRTAP19-5Q3LI72 72 aa4.81□□□□□ -1.64
RBM39-243ENST00000528062 INE1O15225 51 aa4.8□□□□□ -1.64
RBM39-243ENST00000528062 KRTAP9-7A8MTY7 169 aa4.78□□□□□ -1.64
RBM39-243ENST00000528062 KRTAP6-3Q3LI67 103 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms