RNA–Protein interactions for RNA: ENST00000527683.1

LINC01001-202, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 1 (best)

Gene LINC01001, Length 683 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-202ENST00000527683 C8orf87E5RJ46 101 aa3.3□□□□□ -1.88
LINC01001-202ENST00000527683 C8orf17Q9NRJ1 99 aa3.3□□□□□ -1.88
LINC01001-202ENST00000527683 IGHV6-1A0A0B4J1U7 121 aa3.29□□□□□ -1.88
LINC01001-202ENST00000527683 H3BPC8 53 aa3.29□□□□□ -1.88
LINC01001-202ENST00000527683 PMAIP1Q13794 54 aa3.29□□□□□ -1.88
LINC01001-202ENST00000527683 TP53AIP1Q9HCN2 124 aa3.29□□□□□ -1.88
LINC01001-202ENST00000527683 MP68P56378 58 aa3.28□□□□□ -1.88
LINC01001-202ENST00000527683 KRTAP10-5P60370 271 aa3.28□□□□□ -1.88
LINC01001-202ENST00000527683 LINC00304Q8N9R0 145 aa3.28□□□□□ -1.88
LINC01001-202ENST00000527683 H7BZZ5 65 aa3.27□□□□□ -1.89
LINC01001-202ENST00000527683 MRPL34Q9BQ48 92 aaKnown RBP3.27□□□□□ -1.89
LINC01001-202ENST00000527683 TRAV22A0A0B4J277 110 aa3.26□□□□□ -1.89
LINC01001-202ENST00000527683 FP248Q71RG6 208 aaPredicted RBP3.26□□□□□ -1.89
LINC01001-202ENST00000527683 SNURFQ9Y675 71 aa3.26□□□□□ -1.89
LINC01001-202ENST00000527683 H0Y9P7 68 aa3.25□□□□□ -1.89
LINC01001-202ENST00000527683 KRTAP10-12P60413 245 aa3.25□□□□□ -1.89
LINC01001-202ENST00000527683 ZCCHC13Q8WW36 166 aaKnown RBP3.25□□□□□ -1.89
LINC01001-202ENST00000527683 NDUFS5O43920 106 aa3.24□□□□□ -1.89
LINC01001-202ENST00000527683 LINC00313P59037 77 aa3.24□□□□□ -1.89
LINC01001-202ENST00000527683 FAT4Q6V0I7 4981 aa3.23□□□□□ -1.89
LINC01001-202ENST00000527683 NOTCH2NLQ7Z3S9 236 aa3.22□□□□□ -1.89
LINC01001-202ENST00000527683 LINC00208Q96KT6 92 aa3.22□□□□□ -1.89
LINC01001-202ENST00000527683 C1orf64Q8NEQ6 169 aa3.21□□□□□ -1.9
LINC01001-202ENST00000527683 RETNLBQ9BQ08 111 aa3.21□□□□□ -1.9
LINC01001-202ENST00000527683 IGLV7-46A0A075B6I9 117 aa3.2□□□□□ -1.9
LINC01001-202ENST00000527683 LOC101927531A0A1B0GV80 90 aa3.2□□□□□ -1.9
LINC01001-202ENST00000527683 KRTAP16-1A8MUX0 517 aa3.2□□□□□ -1.9
LINC01001-202ENST00000527683 TPRXLQ17RH7 258 aa3.2□□□□□ -1.9
LINC01001-202ENST00000527683 SPANXA2-OT1Q8N9U9 137 aa3.2□□□□□ -1.9
LINC01001-202ENST00000527683 CRCT1Q9UGL9 99 aa3.2□□□□□ -1.9
LINC01001-202ENST00000527683 SEC61BP60468 96 aaKnown RBP3.19□□□□□ -1.9
LINC01001-202ENST00000527683 KRTAP13-3Q3SY46 172 aa3.18□□□□□ -1.9
LINC01001-202ENST00000527683 CYP4F30PQ9H0H9 118 aa3.18□□□□□ -1.9
LINC01001-202ENST00000527683 MUC17Q685J3 4493 aa3.17□□□□□ -1.9
LINC01001-202ENST00000527683 KRTAP4-1Q9BYQ7 146 aa3.17□□□□□ -1.9
LINC01001-202ENST00000527683 Q1T7F1 81 aa3.16□□□□□ -1.9
LINC01001-202ENST00000527683 FSIP2Q5CZC0 6907 aa3.16□□□□□ -1.9
LINC01001-202ENST00000527683 Q5W150 140 aa3.15□□□□□ -1.91
LINC01001-202ENST00000527683 KTN1-AS1Q86SY8 53 aa3.15□□□□□ -1.91
LINC01001-202ENST00000527683 KRTAP9-6A8MVA2 160 aa3.14□□□□□ -1.91
LINC01001-202ENST00000527683 C20orf166-AS1Q96NR2 134 aa3.14□□□□□ -1.91
LINC01001-202ENST00000527683 RBM12B-AS1Q9P1G2 102 aa3.14□□□□□ -1.91
LINC01001-202ENST00000527683 A8MUU9 505 aa3.13□□□□□ -1.91
LINC01001-202ENST00000527683 PCOTHQ58A44 107 aa3.13□□□□□ -1.91
LINC01001-202ENST00000527683 LCE3CQ5T5A8 94 aa3.13□□□□□ -1.91
LINC01001-202ENST00000527683 PSPHP1O15172 72 aa3.12□□□□□ -1.91
LINC01001-202ENST00000527683 C9orf92A6NGG3 77 aa3.11□□□□□ -1.91
LINC01001-202ENST00000527683 KRTAP19-2Q3LHN2 52 aa3.11□□□□□ -1.91
LINC01001-202ENST00000527683 C7orf65Q6ZTY9 151 aa3.11□□□□□ -1.91
LINC01001-202ENST00000527683 Q75L30 129 aa3.11□□□□□ -1.91
LINC01001-202ENST00000527683 CHKB-CPT1BH3BT56 60 aa3.1□□□□□ -1.91
LINC01001-202ENST00000527683 SPTSSBQ8NFR3 76 aa3.1□□□□□ -1.91
LINC01001-202ENST00000527683 ATP11AUNQ6ZP68 121 aa3.09□□□□□ -1.91
LINC01001-202ENST00000527683 A8MUN3 132 aa3.08□□□□□ -1.92
LINC01001-202ENST00000527683 HRES1P13985 223 aa3.08□□□□□ -1.92
LINC01001-202ENST00000527683 LCA10Q71F78 164 aa3.08□□□□□ -1.92
LINC01001-202ENST00000527683 DMAC1Q96GE9 116 aa3.08□□□□□ -1.92
LINC01001-202ENST00000527683 ACYP2P14621 99 aa3.07□□□□□ -1.92
LINC01001-202ENST00000527683 MT1HP80294 61 aa3.07□□□□□ -1.92
LINC01001-202ENST00000527683 COA5Q86WW8 74 aa3.07□□□□□ -1.92
LINC01001-202ENST00000527683 RPL37P61927 97 aaKnown RBP3.06□□□□□ -1.92
LINC01001-202ENST00000527683 KRTAP5-1Q6L8H4 278 aa3.06□□□□□ -1.92
LINC01001-202ENST00000527683 A6NED7 52 aa3.05□□□□□ -1.92
LINC01001-202ENST00000527683 Q5VV11 94 aa3.05□□□□□ -1.92
LINC01001-202ENST00000527683 PRR15LQ9BU68 103 aa3.05□□□□□ -1.92
LINC01001-202ENST00000527683 A6NN06 94 aa3.03□□□□□ -1.92
LINC01001-202ENST00000527683 SPINK7P58062 85 aa3.02□□□□□ -1.93
LINC01001-202ENST00000527683 CDC42SE1Q9NRR8 79 aa3.02□□□□□ -1.93
LINC01001-202ENST00000527683 COX6B2Q6YFQ2 88 aa2.98□□□□□ -1.93
LINC01001-202ENST00000527683 LINC01558Q9Y6Z2 57 aa2.98□□□□□ -1.93
LINC01001-202ENST00000527683 M0R2T5 61 aa2.97□□□□□ -1.93
LINC01001-202ENST00000527683 A8MU10 97 aa2.96□□□□□ -1.94
LINC01001-202ENST00000527683 LINC01554Q52M75 96 aa2.96□□□□□ -1.94
LINC01001-202ENST00000527683 PRAC1Q96KF2 57 aa2.95□□□□□ -1.94
LINC01001-202ENST00000527683 KRTAP4-4Q9BYR3 166 aa2.93□□□□□ -1.94
LINC01001-202ENST00000527683 A0A1B0GU69 56 aa2.92□□□□□ -1.94
LINC01001-202ENST00000527683 KRTAP5-4Q6L8H1 288 aa2.9□□□□□ -1.95
LINC01001-202ENST00000527683 S4R3F8 94 aa2.89□□□□□ -1.95
LINC01001-202ENST00000527683 H1FX-AS1Q4G0G2 97 aa2.88□□□□□ -1.95
LINC01001-202ENST00000527683 KRTAP5-9P26371 169 aa2.87□□□□□ -1.95
LINC01001-202ENST00000527683 LCE3EQ5T5B0 92 aa2.87□□□□□ -1.95
LINC01001-202ENST00000527683 FLGP20930 4061 aaPredicted RBP2.87□□□□□ -1.95
LINC01001-202ENST00000527683 UQCR11O14957 56 aa2.86□□□□□ -1.95
LINC01001-202ENST00000527683 USH2AO75445 5202 aa2.85□□□□□ -1.95
LINC01001-202ENST00000527683 SSPOA2VEC9 5147 aa2.84□□□□□ -1.95
LINC01001-202ENST00000527683 FCGBPQ9Y6R7 5405 aaPredicted RBP2.84□□□□□ -1.95
LINC01001-202ENST00000527683 NDUFAF8A1L188 74 aa2.83□□□□□ -1.96
LINC01001-202ENST00000527683 MT2AP02795 61 aa2.82□□□□□ -1.96
LINC01001-202ENST00000527683 ADM2Q7Z4H4 148 aa2.82□□□□□ -1.96
LINC01001-202ENST00000527683 MIR22HGQ0VDD5 57 aa2.81□□□□□ -1.96
LINC01001-202ENST00000527683 CSAG1Q6PB30 78 aa2.81□□□□□ -1.96
LINC01001-202ENST00000527683 SPATA8Q6RVD6 105 aa2.81□□□□□ -1.96
LINC01001-202ENST00000527683 A0A1B0GU33 70 aa2.8□□□□□ -1.96
LINC01001-202ENST00000527683 MT1FP04733 61 aa2.8□□□□□ -1.96
LINC01001-202ENST00000527683 SYNE2Q8WXH0 6885 aaKnown RBP2.79□□□□□ -1.96
LINC01001-202ENST00000527683 H0YAA0 97 aa2.79□□□□□ -1.96
LINC01001-202ENST00000527683 KRTAP10-10P60014 251 aa2.77□□□□□ -1.97
LINC01001-202ENST00000527683 MACF1Q9UPN3 7388 aaKnown RBP2.77□□□□□ -1.97
LINC01001-202ENST00000527683 KRTAP6-3Q3LI67 103 aa2.75□□□□□ -1.97
LINC01001-202ENST00000527683 KRTAP19-6Q3LI70 58 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms