RNA–Protein interactions for RNA: ENST00000527464.5

NR1H3-229, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best)

Gene NR1H3, Length 1,183 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-229ENST00000527464 LINC00208Q96KT6 92 aa7.73□□□□□ -1.17
NR1H3-229ENST00000527464 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.72□□□□□ -1.17
NR1H3-229ENST00000527464 A8MUN3 132 aa7.71□□□□□ -1.18
NR1H3-229ENST00000527464 MT-ATP8P03928 68 aa7.69□□□□□ -1.18
NR1H3-229ENST00000527464 H3BPC8 53 aa7.68□□□□□ -1.18
NR1H3-229ENST00000527464 KLKP1Q107X0 134 aa7.66□□□□□ -1.18
NR1H3-229ENST00000527464 NDUFC1O43677 76 aa7.65□□□□□ -1.18
NR1H3-229ENST00000527464 SCGB1A1P11684 91 aa7.65□□□□□ -1.18
NR1H3-229ENST00000527464 SPRR2GQ9BYE4 73 aa7.63□□□□□ -1.19
NR1H3-229ENST00000527464 IMUPQ9GZP8 106 aa7.63□□□□□ -1.19
NR1H3-229ENST00000527464 KRTAP9-7A8MTY7 169 aa7.59□□□□□ -1.19
NR1H3-229ENST00000527464 CRIPTQ9P021 101 aa7.59□□□□□ -1.19
NR1H3-229ENST00000527464 H0YAA0 97 aa7.58□□□□□ -1.2
NR1H3-229ENST00000527464 KRTAP19-8Q3LI54 63 aa7.57□□□□□ -1.2
NR1H3-229ENST00000527464 Q5VV11 94 aa7.56□□□□□ -1.2
NR1H3-229ENST00000527464 MACF1Q9UPN3 7388 aaKnown RBP7.52□□□□□ -1.21
NR1H3-229ENST00000527464 MT1BP07438 61 aa7.52□□□□□ -1.21
NR1H3-229ENST00000527464 SMIM20Q8N5G0 67 aa7.51□□□□□ -1.21
NR1H3-229ENST00000527464 DMAC1Q96GE9 116 aa7.5□□□□□ -1.21
NR1H3-229ENST00000527464 TRAV7A0A075B6U4 112 aa7.47□□□□□ -1.21
NR1H3-229ENST00000527464 SYNE2Q8WXH0 6885 aaKnown RBP7.45□□□□□ -1.22
NR1H3-229ENST00000527464 ADM2Q7Z4H4 148 aa7.44□□□□□ -1.22
NR1H3-229ENST00000527464 A6NN06 94 aa7.42□□□□□ -1.22
NR1H3-229ENST00000527464 ANAPC13Q9BS18 74 aa7.39□□□□□ -1.23
NR1H3-229ENST00000527464 C20orf197Q8N268 126 aa7.36□□□□□ -1.23
NR1H3-229ENST00000527464 ACYP2P14621 99 aa7.35□□□□□ -1.23
NR1H3-229ENST00000527464 KRTAP10-5P60370 271 aa7.35□□□□□ -1.23
NR1H3-229ENST00000527464 SERP2Q8N6R1 65 aa7.3□□□□□ -1.24
NR1H3-229ENST00000527464 PCP4P48539 62 aa7.29□□□□□ -1.24
NR1H3-229ENST00000527464 KRTAP6-3Q3LI67 103 aa7.29□□□□□ -1.24
NR1H3-229ENST00000527464 P0C880 135 aa7.27□□□□□ -1.25
NR1H3-229ENST00000527464 SPTSSBQ8NFR3 76 aa7.27□□□□□ -1.25
NR1H3-229ENST00000527464 R4GN34 69 aa7.27□□□□□ -1.25
NR1H3-229ENST00000527464 COX7CP15954 63 aa7.25□□□□□ -1.25
NR1H3-229ENST00000527464 SNURFQ9Y675 71 aa7.25□□□□□ -1.25
NR1H3-229ENST00000527464 KRTAP3-2Q9BYR7 98 aa7.24□□□□□ -1.25
NR1H3-229ENST00000527464 SPANXA2-OT1Q8N9U9 137 aa7.22□□□□□ -1.25
NR1H3-229ENST00000527464 M0QZ58 72 aa7.2□□□□□ -1.26
NR1H3-229ENST00000527464 CHKB-CPT1BH3BT56 60 aa7.19□□□□□ -1.26
NR1H3-229ENST00000527464 PLAC4Q8WY50 150 aa7.19□□□□□ -1.26
NR1H3-229ENST00000527464 CCDC179H3BU77 68 aa7.18□□□□□ -1.26
NR1H3-229ENST00000527464 PRO2289Q9P1D8 64 aa7.16□□□□□ -1.26
NR1H3-229ENST00000527464 MT1XP80297 61 aa7.08□□□□□ -1.28
NR1H3-229ENST00000527464 LINC01554Q52M75 96 aa7.06□□□□□ -1.28
NR1H3-229ENST00000527464 NEBP20929 6669 aa7.02□□□□□ -1.29
NR1H3-229ENST00000527464 KRTAP5-9P26371 169 aa7□□□□□ -1.29
NR1H3-229ENST00000527464 MUC12Q9UKN1 5478 aa6.99□□□□□ -1.29
NR1H3-229ENST00000527464 CYSTM1Q9H1C7 97 aa6.98□□□□□ -1.29
NR1H3-229ENST00000527464 COA5Q86WW8 74 aa6.96□□□□□ -1.3
NR1H3-229ENST00000527464 H7BZZ5 65 aa6.95□□□□□ -1.3
NR1H3-229ENST00000527464 KRTAP12-2P59991 146 aa6.94□□□□□ -1.3
NR1H3-229ENST00000527464 KMT2DO14686 5537 aa6.94□□□□□ -1.3
NR1H3-229ENST00000527464 TMEM258P61165 79 aa6.93□□□□□ -1.3
NR1H3-229ENST00000527464 ATP5EP56381 51 aaPredicted RBP6.87□□□□□ -1.31
NR1H3-229ENST00000527464 MDN1Q9NU22 5596 aa6.86□□□□□ -1.31
NR1H3-229ENST00000527464 SEC61GP60059 68 aa6.85□□□□□ -1.31
NR1H3-229ENST00000527464 SERP1Q9Y6X1 66 aa6.83□□□□□ -1.32
NR1H3-229ENST00000527464 KRTAP13-4Q3LI77 160 aa6.82□□□□□ -1.32
NR1H3-229ENST00000527464 KRTAP8-1Q8IUC2 63 aa6.81□□□□□ -1.32
NR1H3-229ENST00000527464 SPRR2FQ96RM1 72 aa6.79□□□□□ -1.32
NR1H3-229ENST00000527464 KRTAP10-12P60413 245 aa6.75□□□□□ -1.33
NR1H3-229ENST00000527464 KRTAP10-7P60409 375 aaPredicted RBP6.74□□□□□ -1.33
NR1H3-229ENST00000527464 KRTAP4-8A0A0G2JLE6 195 aa6.71□□□□□ -1.34
NR1H3-229ENST00000527464 KRTAP4-8Q9BYQ9 185 aa6.71□□□□□ -1.34
NR1H3-229ENST00000527464 A0A1B0GU33 70 aa6.7□□□□□ -1.34
NR1H3-229ENST00000527464 CAMK2N1Q7Z7J9 78 aa6.7□□□□□ -1.34
NR1H3-229ENST00000527464 KRTAP20-1Q3LI63 56 aa6.68□□□□□ -1.34
NR1H3-229ENST00000527464 SPRR2EP22531 72 aa6.66□□□□□ -1.34
NR1H3-229ENST00000527464 SPRR2BP35325 72 aa6.66□□□□□ -1.34
NR1H3-229ENST00000527464 SPRR2AP35326 72 aa6.66□□□□□ -1.34
NR1H3-229ENST00000527464 SPATA8Q6RVD6 105 aa6.64□□□□□ -1.35
NR1H3-229ENST00000527464 A0A0D9SG42 100 aa6.63□□□□□ -1.35
NR1H3-229ENST00000527464 A0A1B0GU69 56 aa6.62□□□□□ -1.35
NR1H3-229ENST00000527464 RPS28P62857 69 aaKnown RBP6.62□□□□□ -1.35
NR1H3-229ENST00000527464 LCE1AQ5T7P2 110 aa6.6□□□□□ -1.35
NR1H3-229ENST00000527464 KRTAP2-3P0C7H8 128 aa6.56□□□□□ -1.36
NR1H3-229ENST00000527464 KRTAP2-4Q9BYR9 128 aa6.56□□□□□ -1.36
NR1H3-229ENST00000527464 SMIM26A0A096LP01 95 aa6.55□□□□□ -1.36
NR1H3-229ENST00000527464 SPINT4Q6UDR6 99 aa6.55□□□□□ -1.36
NR1H3-229ENST00000527464 KRTAP12-1P59990 96 aa6.52□□□□□ -1.37
NR1H3-229ENST00000527464 PRR15LQ9BU68 103 aa6.48□□□□□ -1.37
NR1H3-229ENST00000527464 V9GYY9 64 aa6.46□□□□□ -1.38
NR1H3-229ENST00000527464 SPRR2DP22532 72 aa6.44□□□□□ -1.38
NR1H3-229ENST00000527464 LINC01558Q9Y6Z2 57 aa6.43□□□□□ -1.38
NR1H3-229ENST00000527464 A8MU10 97 aa6.4□□□□□ -1.38
NR1H3-229ENST00000527464 Q1T7F1 81 aa6.39□□□□□ -1.39
NR1H3-229ENST00000527464 KRTAP2-2Q9BYT5 123 aa6.36□□□□□ -1.39
NR1H3-229ENST00000527464 KRTAP2-1Q9BYU5 128 aa6.36□□□□□ -1.39
NR1H3-229ENST00000527464 PSPHP1O15172 72 aa6.35□□□□□ -1.39
NR1H3-229ENST00000527464 KRTAP19-7Q3SYF9 63 aa6.33□□□□□ -1.4
NR1H3-229ENST00000527464 MT1EP04732 61 aa6.27□□□□□ -1.41
NR1H3-229ENST00000527464 UQCR11O14957 56 aa6.26□□□□□ -1.41
NR1H3-229ENST00000527464 LCE3BQ5TA77 95 aa6.26□□□□□ -1.41
NR1H3-229ENST00000527464 TNP1P09430 55 aa6.23□□□□□ -1.41
NR1H3-229ENST00000527464 LCE5AQ5TCM9 118 aa6.22□□□□□ -1.41
NR1H3-229ENST00000527464 C10orf95Q9H7T3 257 aa6.22□□□□□ -1.41
NR1H3-229ENST00000527464 KRTAP19-3Q7Z4W3 81 aa6.21□□□□□ -1.42
NR1H3-229ENST00000527464 A6NED7 52 aa6.2□□□□□ -1.42
NR1H3-229ENST00000527464 KRTAP19-5Q3LI72 72 aa6.19□□□□□ -1.42
NR1H3-229ENST00000527464 MIR22HGQ0VDD5 57 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms