RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 KLKP1Q107X0 134 aa7.53□□□□□ -1.2
SSSCA1-202ENST00000526433 KRTAP3-3Q9BYR6 98 aa7.52□□□□□ -1.21
SSSCA1-202ENST00000526433 H3BPC8 53 aa7.48□□□□□ -1.21
SSSCA1-202ENST00000526433 SMIM20Q8N5G0 67 aa7.46□□□□□ -1.22
SSSCA1-202ENST00000526433 A8MUN3 132 aa7.45□□□□□ -1.22
SSSCA1-202ENST00000526433 KRTAP19-1Q8IUB9 90 aa7.43□□□□□ -1.22
SSSCA1-202ENST00000526433 NDUFC1O43677 76 aa7.41□□□□□ -1.22
SSSCA1-202ENST00000526433 TRAV7A0A075B6U4 112 aa7.39□□□□□ -1.23
SSSCA1-202ENST00000526433 ANAPC13Q9BS18 74 aa7.39□□□□□ -1.23
SSSCA1-202ENST00000526433 FCGBPQ9Y6R7 5405 aaPredicted RBP7.35□□□□□ -1.23
SSSCA1-202ENST00000526433 SERP2Q8N6R1 65 aa7.35□□□□□ -1.23
SSSCA1-202ENST00000526433 KRTAP19-6Q3LI70 58 aa7.33□□□□□ -1.24
SSSCA1-202ENST00000526433 PCP4P48539 62 aa7.32□□□□□ -1.24
SSSCA1-202ENST00000526433 DMAC1Q96GE9 116 aa7.3□□□□□ -1.24
SSSCA1-202ENST00000526433 SPRR2GQ9BYE4 73 aa7.3□□□□□ -1.24
SSSCA1-202ENST00000526433 COX7CP15954 63 aa7.28□□□□□ -1.24
SSSCA1-202ENST00000526433 H0YAA0 97 aa7.27□□□□□ -1.25
SSSCA1-202ENST00000526433 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.25□□□□□ -1.25
SSSCA1-202ENST00000526433 CRIPTQ9P021 101 aa7.25□□□□□ -1.25
SSSCA1-202ENST00000526433 KRTAP19-8Q3LI54 63 aa7.24□□□□□ -1.25
SSSCA1-202ENST00000526433 ADM2Q7Z4H4 148 aa7.23□□□□□ -1.25
SSSCA1-202ENST00000526433 CCDC179H3BU77 68 aa7.22□□□□□ -1.25
SSSCA1-202ENST00000526433 MT1BP07438 61 aa7.22□□□□□ -1.25
SSSCA1-202ENST00000526433 Q5VV11 94 aa7.22□□□□□ -1.25
SSSCA1-202ENST00000526433 C20orf197Q8N268 126 aa7.2□□□□□ -1.26
SSSCA1-202ENST00000526433 SNURFQ9Y675 71 aa7.2□□□□□ -1.26
SSSCA1-202ENST00000526433 ACYP2P14621 99 aa7.19□□□□□ -1.26
SSSCA1-202ENST00000526433 KRTAP9-7A8MTY7 169 aa7.11□□□□□ -1.27
SSSCA1-202ENST00000526433 P0C880 135 aa7.09□□□□□ -1.27
SSSCA1-202ENST00000526433 CYSTM1Q9H1C7 97 aa7.09□□□□□ -1.27
SSSCA1-202ENST00000526433 SPANXA2-OT1Q8N9U9 137 aa7.07□□□□□ -1.28
SSSCA1-202ENST00000526433 KRTAP3-2Q9BYR7 98 aa7.07□□□□□ -1.28
SSSCA1-202ENST00000526433 MACF1Q9UPN3 7388 aaKnown RBP7.07□□□□□ -1.28
SSSCA1-202ENST00000526433 A6NN06 94 aa7.06□□□□□ -1.28
SSSCA1-202ENST00000526433 SPTSSBQ8NFR3 76 aa7.05□□□□□ -1.28
SSSCA1-202ENST00000526433 CHKB-CPT1BH3BT56 60 aa7.04□□□□□ -1.28
SSSCA1-202ENST00000526433 H7BZZ5 65 aa7.02□□□□□ -1.29
SSSCA1-202ENST00000526433 KRTAP10-5P60370 271 aa7.01□□□□□ -1.29
SSSCA1-202ENST00000526433 R4GN34 69 aa7.01□□□□□ -1.29
SSSCA1-202ENST00000526433 M0QZ58 72 aa6.97□□□□□ -1.29
SSSCA1-202ENST00000526433 TMEM258P61165 79 aa6.96□□□□□ -1.3
SSSCA1-202ENST00000526433 ATP5EP56381 51 aaPredicted RBP6.93□□□□□ -1.3
SSSCA1-202ENST00000526433 SYNE2Q8WXH0 6885 aaKnown RBP6.92□□□□□ -1.3
SSSCA1-202ENST00000526433 PLAC4Q8WY50 150 aa6.92□□□□□ -1.3
SSSCA1-202ENST00000526433 LINC01554Q52M75 96 aa6.87□□□□□ -1.31
SSSCA1-202ENST00000526433 KRTAP6-3Q3LI67 103 aa6.86□□□□□ -1.31
SSSCA1-202ENST00000526433 COA5Q86WW8 74 aa6.86□□□□□ -1.31
SSSCA1-202ENST00000526433 MT1XP80297 61 aa6.81□□□□□ -1.32
SSSCA1-202ENST00000526433 PRO2289Q9P1D8 64 aa6.8□□□□□ -1.32
SSSCA1-202ENST00000526433 SERP1Q9Y6X1 66 aa6.75□□□□□ -1.33
SSSCA1-202ENST00000526433 SEC61GP60059 68 aa6.68□□□□□ -1.34
SSSCA1-202ENST00000526433 KRTAP13-4Q3LI77 160 aa6.68□□□□□ -1.34
SSSCA1-202ENST00000526433 RPS28P62857 69 aaKnown RBP6.67□□□□□ -1.34
SSSCA1-202ENST00000526433 KRTAP5-9P26371 169 aa6.6□□□□□ -1.35
SSSCA1-202ENST00000526433 KRTAP12-2P59991 146 aa6.6□□□□□ -1.35
SSSCA1-202ENST00000526433 KMT2DO14686 5537 aa6.57□□□□□ -1.36
SSSCA1-202ENST00000526433 SMIM26A0A096LP01 95 aa6.56□□□□□ -1.36
SSSCA1-202ENST00000526433 A0A1B0GU33 70 aa6.56□□□□□ -1.36
SSSCA1-202ENST00000526433 MUC12Q9UKN1 5478 aa6.56□□□□□ -1.36
SSSCA1-202ENST00000526433 SPATA8Q6RVD6 105 aa6.53□□□□□ -1.36
SSSCA1-202ENST00000526433 NEBP20929 6669 aa6.51□□□□□ -1.37
SSSCA1-202ENST00000526433 A0A0D9SG42 100 aa6.51□□□□□ -1.37
SSSCA1-202ENST00000526433 A0A1B0GU69 56 aa6.51□□□□□ -1.37
SSSCA1-202ENST00000526433 KRTAP10-7P60409 375 aaPredicted RBP6.5□□□□□ -1.37
SSSCA1-202ENST00000526433 KRTAP8-1Q8IUC2 63 aa6.49□□□□□ -1.37
SSSCA1-202ENST00000526433 KRTAP4-8A0A0G2JLE6 195 aa6.48□□□□□ -1.37
SSSCA1-202ENST00000526433 CAMK2N1Q7Z7J9 78 aa6.48□□□□□ -1.37
SSSCA1-202ENST00000526433 KRTAP4-8Q9BYQ9 185 aa6.48□□□□□ -1.37
SSSCA1-202ENST00000526433 KRTAP10-12P60413 245 aa6.47□□□□□ -1.37
SSSCA1-202ENST00000526433 V9GYY9 64 aa6.47□□□□□ -1.37
SSSCA1-202ENST00000526433 SPRR2FQ96RM1 72 aa6.46□□□□□ -1.38
SSSCA1-202ENST00000526433 LINC01558Q9Y6Z2 57 aa6.46□□□□□ -1.38
SSSCA1-202ENST00000526433 Q1T7F1 81 aa6.43□□□□□ -1.38
SSSCA1-202ENST00000526433 SPINT4Q6UDR6 99 aa6.41□□□□□ -1.38
SSSCA1-202ENST00000526433 PRR15LQ9BU68 103 aa6.41□□□□□ -1.38
SSSCA1-202ENST00000526433 MDN1Q9NU22 5596 aa6.4□□□□□ -1.38
SSSCA1-202ENST00000526433 KRTAP12-1P59990 96 aa6.38□□□□□ -1.39
SSSCA1-202ENST00000526433 PSPHP1O15172 72 aa6.34□□□□□ -1.39
SSSCA1-202ENST00000526433 A8MU10 97 aa6.33□□□□□ -1.4
SSSCA1-202ENST00000526433 SPRR2EP22531 72 aa6.32□□□□□ -1.4
SSSCA1-202ENST00000526433 SPRR2BP35325 72 aa6.32□□□□□ -1.4
SSSCA1-202ENST00000526433 SPRR2AP35326 72 aa6.32□□□□□ -1.4
SSSCA1-202ENST00000526433 KRTAP20-1Q3LI63 56 aa6.26□□□□□ -1.41
SSSCA1-202ENST00000526433 LCE1AQ5T7P2 110 aa6.26□□□□□ -1.41
SSSCA1-202ENST00000526433 UQCR11O14957 56 aa6.2□□□□□ -1.42
SSSCA1-202ENST00000526433 KRTAP2-3P0C7H8 128 aa6.16□□□□□ -1.42
SSSCA1-202ENST00000526433 KRTAP2-4Q9BYR9 128 aa6.16□□□□□ -1.42
SSSCA1-202ENST00000526433 A6NED7 52 aa6.15□□□□□ -1.42
SSSCA1-202ENST00000526433 SPRR2DP22532 72 aa6.1□□□□□ -1.43
SSSCA1-202ENST00000526433 C10orf95Q9H7T3 257 aa6.1□□□□□ -1.43
SSSCA1-202ENST00000526433 MIR22HGQ0VDD5 57 aa6.09□□□□□ -1.43
SSSCA1-202ENST00000526433 KRTAP19-7Q3SYF9 63 aa6.08□□□□□ -1.44
SSSCA1-202ENST00000526433 TNP1P09430 55 aa6.03□□□□□ -1.44
SSSCA1-202ENST00000526433 BRK1Q8WUW1 75 aa6.03□□□□□ -1.44
SSSCA1-202ENST00000526433 CDC42SE1Q9NRR8 79 aa6.03□□□□□ -1.44
SSSCA1-202ENST00000526433 MT1EP04732 61 aa6.02□□□□□ -1.45
SSSCA1-202ENST00000526433 KRTAP19-5Q3LI72 72 aa5.99□□□□□ -1.45
SSSCA1-202ENST00000526433 KRTAP2-2Q9BYT5 123 aa5.97□□□□□ -1.45
SSSCA1-202ENST00000526433 KRTAP2-1Q9BYU5 128 aa5.97□□□□□ -1.45
SSSCA1-202ENST00000526433 LCE3AQ5TA76 89 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms