RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 KRTAP4-6Q9BYQ5 205 aa5.28□□□□□ -1.56
NEDD8-204ENST00000526430 FAM236DA0A1B0GTK5 79 aa5.27□□□□□ -1.57
NEDD8-204ENST00000526430 FAM236CP0DP71 79 aa5.27□□□□□ -1.57
NEDD8-204ENST00000526430 FAM236AA0A1B0GUQ0 79 aa5.24□□□□□ -1.57
NEDD8-204ENST00000526430 FAM236BA0A1B0GV22 79 aa5.24□□□□□ -1.57
NEDD8-204ENST00000526430 LOC101927531A0A1B0GV80 90 aa5.24□□□□□ -1.57
NEDD8-204ENST00000526430 KRTAP2-3P0C7H8 128 aa5.24□□□□□ -1.57
NEDD8-204ENST00000526430 KLKP1Q107X0 134 aa5.24□□□□□ -1.57
NEDD8-204ENST00000526430 H1FX-AS1Q4G0G2 97 aa5.24□□□□□ -1.57
NEDD8-204ENST00000526430 C5orf47Q569G3 176 aa5.24□□□□□ -1.57
NEDD8-204ENST00000526430 C1orf64Q8NEQ6 169 aa5.24□□□□□ -1.57
NEDD8-204ENST00000526430 KRTAP2-4Q9BYR9 128 aa5.24□□□□□ -1.57
NEDD8-204ENST00000526430 LINC00208Q96KT6 92 aa5.23□□□□□ -1.57
NEDD8-204ENST00000526430 ATOX1O00244 68 aa5.22□□□□□ -1.57
NEDD8-204ENST00000526430 MDN1Q9NU22 5596 aa5.22□□□□□ -1.57
NEDD8-204ENST00000526430 SCGB1A1P11684 91 aa5.21□□□□□ -1.58
NEDD8-204ENST00000526430 KRTAP5-9P26371 169 aa5.21□□□□□ -1.58
NEDD8-204ENST00000526430 KMT2DO14686 5537 aa5.19□□□□□ -1.58
NEDD8-204ENST00000526430 TRAV7A0A075B6U4 112 aa5.18□□□□□ -1.58
NEDD8-204ENST00000526430 H3BPC8 53 aa5.17□□□□□ -1.58
NEDD8-204ENST00000526430 MP68P56378 58 aa5.17□□□□□ -1.58
NEDD8-204ENST00000526430 SMIM20Q8N5G0 67 aa5.15□□□□□ -1.59
NEDD8-204ENST00000526430 LCA10Q71F78 164 aa5.11□□□□□ -1.59
NEDD8-204ENST00000526430 SERP2Q8N6R1 65 aa5.11□□□□□ -1.59
NEDD8-204ENST00000526430 S4R3F8 94 aa5.08□□□□□ -1.6
NEDD8-204ENST00000526430 SVIPQ8NHG7 77 aa5.07□□□□□ -1.6
NEDD8-204ENST00000526430 SNURFQ9Y675 71 aa5.07□□□□□ -1.6
NEDD8-204ENST00000526430 A6NN06 94 aa5.05□□□□□ -1.6
NEDD8-204ENST00000526430 A8MUN3 132 aa5.04□□□□□ -1.6
NEDD8-204ENST00000526430 C20orf197Q8N268 126 aa5.04□□□□□ -1.6
NEDD8-204ENST00000526430 DMAC1Q96GE9 116 aa5.04□□□□□ -1.6
NEDD8-204ENST00000526430 COX7CP15954 63 aa5.03□□□□□ -1.6
NEDD8-204ENST00000526430 KRTAP2-2Q9BYT5 123 aa5.03□□□□□ -1.6
NEDD8-204ENST00000526430 KRTAP2-1Q9BYU5 128 aa5.03□□□□□ -1.6
NEDD8-204ENST00000526430 GPR98Q8WXG9 6306 aa5.03□□□□□ -1.6
NEDD8-204ENST00000526430 CSAG1Q6PB30 78 aa5.02□□□□□ -1.61
NEDD8-204ENST00000526430 CYSTM1Q9H1C7 97 aa5.02□□□□□ -1.61
NEDD8-204ENST00000526430 SPANXA2-OT1Q8N9U9 137 aa4.96□□□□□ -1.62
NEDD8-204ENST00000526430 KRTAP4-8Q9BYQ9 185 aa4.95□□□□□ -1.62
NEDD8-204ENST00000526430 H7BZZ5 65 aa4.94□□□□□ -1.62
NEDD8-204ENST00000526430 NDUFC1O43677 76 aa4.94□□□□□ -1.62
NEDD8-204ENST00000526430 ANAPC13Q9BS18 74 aa4.94□□□□□ -1.62
NEDD8-204ENST00000526430 ACYP2P14621 99 aa4.92□□□□□ -1.62
NEDD8-204ENST00000526430 SPRR2EP22531 72 aa4.92□□□□□ -1.62
NEDD8-204ENST00000526430 SPRR2BP35325 72 aa4.92□□□□□ -1.62
NEDD8-204ENST00000526430 SPRR2AP35326 72 aa4.92□□□□□ -1.62
NEDD8-204ENST00000526430 CCDC179H3BU77 68 aa4.91□□□□□ -1.62
NEDD8-204ENST00000526430 KRTAP10-5P60370 271 aa4.91□□□□□ -1.62
NEDD8-204ENST00000526430 KRTAP19-4Q3LI73 84 aa4.91□□□□□ -1.62
NEDD8-204ENST00000526430 H0YAA0 97 aa4.9□□□□□ -1.63
NEDD8-204ENST00000526430 MT1BP07438 61 aa4.89□□□□□ -1.63
NEDD8-204ENST00000526430 SPRR2GQ9BYE4 73 aa4.86□□□□□ -1.63
NEDD8-204ENST00000526430 SPRR2FQ96RM1 72 aa4.85□□□□□ -1.63
NEDD8-204ENST00000526430 ADM2Q7Z4H4 148 aa4.84□□□□□ -1.63
NEDD8-204ENST00000526430 KRTAP4-12Q9BQ66 201 aa4.84□□□□□ -1.63
NEDD8-204ENST00000526430 Q5VV11 94 aa4.83□□□□□ -1.64
NEDD8-204ENST00000526430 P0C880 135 aa4.82□□□□□ -1.64
NEDD8-204ENST00000526430 KRTAP19-8Q3LI54 63 aa4.81□□□□□ -1.64
NEDD8-204ENST00000526430 KRTAP23-1A1A580 65 aa4.8□□□□□ -1.64
NEDD8-204ENST00000526430 COA5Q86WW8 74 aa4.8□□□□□ -1.64
NEDD8-204ENST00000526430 LCE1AQ5T7P2 110 aa4.79□□□□□ -1.64
NEDD8-204ENST00000526430 SPRR2DP22532 72 aa4.77□□□□□ -1.65
NEDD8-204ENST00000526430 CRIPTQ9P021 101 aa4.77□□□□□ -1.65
NEDD8-204ENST00000526430 CHKB-CPT1BH3BT56 60 aa4.76□□□□□ -1.65
NEDD8-204ENST00000526430 LCE3BQ5TA77 95 aa4.74□□□□□ -1.65
NEDD8-204ENST00000526430 SPTSSBQ8NFR3 76 aa4.73□□□□□ -1.65
NEDD8-204ENST00000526430 TMEM258P61165 79 aa4.66□□□□□ -1.66
NEDD8-204ENST00000526430 ATP5EP56381 51 aaPredicted RBP4.65□□□□□ -1.67
NEDD8-204ENST00000526430 KRTAP13-4Q3LI77 160 aa4.65□□□□□ -1.67
NEDD8-204ENST00000526430 M0QZ58 72 aa4.64□□□□□ -1.67
NEDD8-204ENST00000526430 KRTAP8-1Q8IUC2 63 aa4.64□□□□□ -1.67
NEDD8-204ENST00000526430 R4GN34 69 aa4.63□□□□□ -1.67
NEDD8-204ENST00000526430 DSTQ03001 7570 aaKnown RBP4.62□□□□□ -1.67
NEDD8-204ENST00000526430 KRTAP9-9Q9BYP9 154 aa4.61□□□□□ -1.67
NEDD8-204ENST00000526430 KRTAP9-4Q9BYQ2 154 aa4.61□□□□□ -1.67
NEDD8-204ENST00000526430 PCP4P48539 62 aa4.59□□□□□ -1.67
NEDD8-204ENST00000526430 MT1XP80297 61 aa4.54□□□□□ -1.68
NEDD8-204ENST00000526430 LINC01554Q52M75 96 aa4.54□□□□□ -1.68
NEDD8-204ENST00000526430 LINC01558Q9Y6Z2 57 aa4.53□□□□□ -1.68
NEDD8-204ENST00000526430 SERP1Q9Y6X1 66 aa4.52□□□□□ -1.69
NEDD8-204ENST00000526430 A0A1B0GU33 70 aa4.51□□□□□ -1.69
NEDD8-204ENST00000526430 SPATA8Q6RVD6 105 aa4.51□□□□□ -1.69
NEDD8-204ENST00000526430 A0A1B0GU69 56 aa4.5□□□□□ -1.69
NEDD8-204ENST00000526430 SEC61GP60059 68 aa4.5□□□□□ -1.69
NEDD8-204ENST00000526430 LCE4AQ5TA78 99 aa4.5□□□□□ -1.69
NEDD8-204ENST00000526430 KRTAP4-8A0A0G2JLE6 195 aa4.49□□□□□ -1.69
NEDD8-204ENST00000526430 KRTAP12-2P59991 146 aa4.49□□□□□ -1.69
NEDD8-204ENST00000526430 PLAC4Q8WY50 150 aa4.49□□□□□ -1.69
NEDD8-204ENST00000526430 KRTAP4-9Q9BYQ8 210 aa4.49□□□□□ -1.69
NEDD8-204ENST00000526430 PRO2289Q9P1D8 64 aa4.49□□□□□ -1.69
NEDD8-204ENST00000526430 LCE1DQ5T752 114 aa4.46□□□□□ -1.7
NEDD8-204ENST00000526430 A0A0D9SG42 100 aa4.41□□□□□ -1.7
NEDD8-204ENST00000526430 KRTAP12-1P59990 96 aa4.41□□□□□ -1.7
NEDD8-204ENST00000526430 A8MU10 97 aa4.4□□□□□ -1.71
NEDD8-204ENST00000526430 RPS28P62857 69 aaKnown RBP4.4□□□□□ -1.71
NEDD8-204ENST00000526430 HMCN1Q96RW7 5635 aa4.4□□□□□ -1.71
NEDD8-204ENST00000526430 AHNAK2Q8IVF2 5795 aa4.39□□□□□ -1.71
NEDD8-204ENST00000526430 Q1T7F1 81 aa4.39□□□□□ -1.71
NEDD8-204ENST00000526430 KRTAP5-10Q6L8G5 202 aa4.38□□□□□ -1.71
NEDD8-204ENST00000526430 PRR15LQ9BU68 103 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms