RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 FLNBO75369 2602 aaKnown RBP0.11□□□□□ -2.39
ECHDC1-219ENST00000526299 TNRC18O15417 2968 aaPredicted RBP0.11□□□□□ -2.39
ECHDC1-219ENST00000526299 DMBT1Q9UGM3 2413 aaPredicted RBP0.11□□□□□ -2.39
ECHDC1-219ENST00000526299 MT1AP04731 61 aa0.11□□□□□ -2.39
ECHDC1-219ENST00000526299 ACACAQ13085 2346 aa0.11□□□□□ -2.39
ECHDC1-219ENST00000526299 SETD2Q9BYW2 2564 aaPredicted RBP0.11□□□□□ -2.39
ECHDC1-219ENST00000526299 VWFP04275 2813 aa0.11□□□□□ -2.39
ECHDC1-219ENST00000526299 MUC17Q685J3 4493 aa0.11□□□□□ -2.39
ECHDC1-219ENST00000526299 COL6A5A8TX70 2615 aa0.11□□□□□ -2.39
ECHDC1-219ENST00000526299 PRRC2CQ9Y520 2896 aaKnown RBP0.11□□□□□ -2.39
ECHDC1-219ENST00000526299 UTP20O75691 2785 aaKnown RBP0.11□□□□□ -2.39
ECHDC1-219ENST00000526299 HMCN2Q8NDA2 5059 aa0.11□□□□□ -2.39
ECHDC1-219ENST00000526299 SONP18583 2426 aaKnown RBP0.11□□□□□ -2.39
ECHDC1-219ENST00000526299 GCN1Q92616 2671 aaKnown RBP0.1□□□□□ -2.39
ECHDC1-219ENST00000526299 NSD1Q96L73 2696 aaPredicted RBP0.1□□□□□ -2.39
ECHDC1-219ENST00000526299 ZFHX4Q86UP3 3567 aa0.1□□□□□ -2.39
ECHDC1-219ENST00000526299 DNAH5Q8TE73 4624 aa0.1□□□□□ -2.39
ECHDC1-219ENST00000526299 KMT2CQ8NEZ4 4911 aaKnown RBP0.1□□□□□ -2.39
ECHDC1-219ENST00000526299 STARD9Q9P2P6 4700 aa0.1□□□□□ -2.39
ECHDC1-219ENST00000526299 CELSR1Q9NYQ6 3014 aa0.1□□□□□ -2.39
ECHDC1-219ENST00000526299 SPG11Q96JI7 2443 aa0.09□□□□□ -2.39
ECHDC1-219ENST00000526299 CCDC168Q8NDH2 2452 aa0.09□□□□□ -2.39
ECHDC1-219ENST00000526299 SRRM2Q9UQ35 2752 aaKnown RBP0.09□□□□□ -2.39
ECHDC1-219ENST00000526299 CACNA1AO00555 2505 aa0.09□□□□□ -2.39
ECHDC1-219ENST00000526299 SETXQ7Z333 2677 aaKnown RBP0.09□□□□□ -2.39
ECHDC1-219ENST00000526299 COX14Q96I36 57 aa0.09□□□□□ -2.4
ECHDC1-219ENST00000526299 REV3LO60673 3130 aa0.09□□□□□ -2.4
ECHDC1-219ENST00000526299 ACACBO00763 2458 aa0.09□□□□□ -2.4
ECHDC1-219ENST00000526299 TRIOO75962 3097 aa0.09□□□□□ -2.4
ECHDC1-219ENST00000526299 FASNP49327 2511 aaKnown RBP0.09□□□□□ -2.4
ECHDC1-219ENST00000526299 MGAM2Q2M2H8 2515 aa0.09□□□□□ -2.4
ECHDC1-219ENST00000526299 PKD1L1Q8TDX9 2849 aa0.09□□□□□ -2.4
ECHDC1-219ENST00000526299 DNHD1Q96M86 4753 aa0.09□□□□□ -2.4
ECHDC1-219ENST00000526299 DMXL1Q9Y485 3027 aa0.08□□□□□ -2.4
ECHDC1-219ENST00000526299 LRRK2Q5S007 2527 aa0.08□□□□□ -2.4
ECHDC1-219ENST00000526299 ANKHD1Q8IWZ3 2542 aaKnown RBP0.08□□□□□ -2.4
ECHDC1-219ENST00000526299 KRTAP20-2Q3LI61 65 aa0.08□□□□□ -2.4
ECHDC1-219ENST00000526299 KRTAP19-5Q3LI72 72 aa0.08□□□□□ -2.4
ECHDC1-219ENST00000526299 LAMA5O15230 3695 aa0.08□□□□□ -2.4
ECHDC1-219ENST00000526299 SVEP1Q4LDE5 3571 aa0.08□□□□□ -2.4
ECHDC1-219ENST00000526299 SPENQ96T58 3664 aaKnown RBP0.08□□□□□ -2.4
ECHDC1-219ENST00000526299 HRNRQ86YZ3 2850 aaPredicted RBP0.08□□□□□ -2.4
ECHDC1-219ENST00000526299 TRRAPQ9Y4A5 3859 aa0.07□□□□□ -2.4
ECHDC1-219ENST00000526299 NF1P21359 2839 aa0.07□□□□□ -2.4
ECHDC1-219ENST00000526299 USH2AO75445 5202 aa0.07□□□□□ -2.4
ECHDC1-219ENST00000526299 FLNCQ14315 2725 aa0.07□□□□□ -2.4
ECHDC1-219ENST00000526299 MT1GP13640 62 aa0.07□□□□□ -2.4
ECHDC1-219ENST00000526299 MT1HP80294 61 aa0.07□□□□□ -2.4
ECHDC1-219ENST00000526299 KRTAP6-1Q3LI64 71 aa0.07□□□□□ -2.4
ECHDC1-219ENST00000526299 STAB1Q9NY15 2570 aa0.07□□□□□ -2.4
ECHDC1-219ENST00000526299 ANKRD11Q6UB99 2663 aaPredicted RBP0.07□□□□□ -2.4
ECHDC1-219ENST00000526299 NBPF19A0A087WUL8 3843 aa0.07□□□□□ -2.4
ECHDC1-219ENST00000526299 RYR1P21817 5038 aa0.07□□□□□ -2.4
ECHDC1-219ENST00000526299 FAM186AA6NE01 2351 aa0.06□□□□□ -2.4
ECHDC1-219ENST00000526299 MUC2Q02817 5179 aa0.06□□□□□ -2.4
ECHDC1-219ENST00000526299 MT1LQ93083 61 aa0.06□□□□□ -2.4
ECHDC1-219ENST00000526299 LAMA1P25391 3075 aa0.06□□□□□ -2.4
ECHDC1-219ENST00000526299 UBR4Q5T4S7 5183 aa0.06□□□□□ -2.4
ECHDC1-219ENST00000526299 HIVEP1P15822 2718 aa0.06□□□□□ -2.4
ECHDC1-219ENST00000526299 NBEAL1Q6ZS30 2694 aa0.05□□□□□ -2.4
ECHDC1-219ENST00000526299 RIF1Q5UIP0 2472 aaKnown RBP0.05□□□□□ -2.4
ECHDC1-219ENST00000526299 TGP01266 2768 aa0.05□□□□□ -2.4
ECHDC1-219ENST00000526299 TENM2Q9NT68 2774 aa0.05□□□□□ -2.4
ECHDC1-219ENST00000526299 MT1EP04732 61 aa0.05□□□□□ -2.4
ECHDC1-219ENST00000526299 MT1XP80297 61 aa0.05□□□□□ -2.4
ECHDC1-219ENST00000526299 ZANQ9Y493 2812 aa0.05□□□□□ -2.4
ECHDC1-219ENST00000526299 DCHS2Q6V1P9 2916 aa0.05□□□□□ -2.4
ECHDC1-219ENST00000526299 SSPOA2VEC9 5147 aa0.05□□□□□ -2.4
ECHDC1-219ENST00000526299 NBEAL2Q6ZNJ1 2754 aa0.05□□□□□ -2.4
ECHDC1-219ENST00000526299 MYO18BQ8IUG5 2567 aa0.04□□□□□ -2.4
ECHDC1-219ENST00000526299 TEP1Q99973 2627 aaKnown RBP0.04□□□□□ -2.4
ECHDC1-219ENST00000526299 SPTBN5Q9NRC6 3674 aaKnown RBP0.04□□□□□ -2.4
ECHDC1-219ENST00000526299 MT1HL1P0DM35 61 aa0.04□□□□□ -2.4
ECHDC1-219ENST00000526299 MT4P47944 62 aa0.04□□□□□ -2.4
ECHDC1-219ENST00000526299 RANBP2P49792 3224 aaKnown RBP0.04□□□□□ -2.4
ECHDC1-219ENST00000526299 FLNAP21333 2647 aaKnown RBP0.04□□□□□ -2.4
ECHDC1-219ENST00000526299 COL6A3P12111 3177 aa0.04□□□□□ -2.4
ECHDC1-219ENST00000526299 MXRA5Q9NR99 2828 aa0.04□□□□□ -2.4
ECHDC1-219ENST00000526299 EPG5Q9HCE0 2579 aa0.03□□□□□ -2.4
ECHDC1-219ENST00000526299 KALRNO60229 2985 aa0.03□□□□□ -2.4
ECHDC1-219ENST00000526299 BIRC6Q9NR09 4857 aa0.03□□□□□ -2.4
ECHDC1-219ENST00000526299 WDR87Q6ZQQ6 2873 aa0.03□□□□□ -2.4
ECHDC1-219ENST00000526299 SPTAN1Q13813 2472 aaKnown RBP0.03□□□□□ -2.4
ECHDC1-219ENST00000526299 NBEAQ8NFP9 2946 aa0.03□□□□□ -2.4
ECHDC1-219ENST00000526299 TLN2Q9Y4G6 2542 aa0.03□□□□□ -2.4
ECHDC1-219ENST00000526299 HERC2O95714 4834 aa0.03□□□□□ -2.41
ECHDC1-219ENST00000526299 CRYBG3Q68DQ2 2970 aa0.03□□□□□ -2.41
ECHDC1-219ENST00000526299 HTTP42858 3142 aa0.02□□□□□ -2.41
ECHDC1-219ENST00000526299 CELSR3Q9NYQ7 3312 aa0.02□□□□□ -2.41
ECHDC1-219ENST00000526299 PDZD2O15018 2839 aa0.02□□□□□ -2.41
ECHDC1-219ENST00000526299 DSTQ03001 7570 aaKnown RBP0.02□□□□□ -2.41
ECHDC1-219ENST00000526299 MT2AP02795 61 aa0.02□□□□□ -2.41
ECHDC1-219ENST00000526299 TACC2O95359 2948 aa0.02□□□□□ -2.41
ECHDC1-219ENST00000526299 DOPEY1Q5JWR5 2465 aa0.02□□□□□ -2.41
ECHDC1-219ENST00000526299 FSIP2Q5CZC0 6907 aa0.01□□□□□ -2.41
ECHDC1-219ENST00000526299 USP9YO00507 2555 aaPredicted RBP0.01□□□□□ -2.41
ECHDC1-219ENST00000526299 USP9XQ93008 2570 aaPredicted RBP0.01□□□□□ -2.41
ECHDC1-219ENST00000526299 SYNE2Q8WXH0 6885 aaKnown RBP0.01□□□□□ -2.41
ECHDC1-219ENST00000526299 A0A0C4DFX4 3053 aa0.01□□□□□ -2.41
ECHDC1-219ENST00000526299 HYDINQ4G0P3 5121 aa0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 251 ms